About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID 		Tssr161595
transcription start site region 161595
MGI:6089362

<< first < prev1 next > last >>
Showing SNP(s) 1 - 74 of 74

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs241783128
MGI SNP Detail		 ChrX:98084269 Stard8 within coordinates of
Tssr161595 1941 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs249180796
MGI SNP Detail		 ChrX:98084310 Stard8 within coordinates of
Tssr161595 1900 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs218188696
MGI SNP Detail		 ChrX:98084325 Stard8 within coordinates of
Tssr161595 1885 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C T C C C C C C C T C C C
rs238788869
MGI SNP Detail		 ChrX:98084326 Stard8 within coordinates of
Tssr161595 1884 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A G A A A A A A A G A A A
rs255806243
MGI SNP Detail		 ChrX:98084339 Stard8 within coordinates of
Tssr161595 1871 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G
rs225350462
MGI SNP Detail		 ChrX:98084386 Stard8 within coordinates of
Tssr161595 1824 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs245357535
MGI SNP Detail		 ChrX:98084478 Stard8 within coordinates of
Tssr161595 1732 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs31846124
MGI SNP Detail		 ChrX:98084597 Stard8 within coordinates of
Tssr161595 1613 bp upstream
 SNP A/G G G G G G A G G G G G G G
rs233294603
MGI SNP Detail		 ChrX:98084611 Stard8 within coordinates of
Tssr161595 1599 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs254383126
MGI SNP Detail		 ChrX:98084759 Stard8 within coordinates of
Tssr161595 1451 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs256693107
MGI SNP Detail		 ChrX:98084760 Stard8 within coordinates of
Tssr161595 1450 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs224104482
MGI SNP Detail		 ChrX:98084973 Stard8 within coordinates of
Tssr161595 1237 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs245745299
MGI SNP Detail		 ChrX:98084995 Stard8 within coordinates of
Tssr161595 1215 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213635230
MGI SNP Detail		 ChrX:98085092 Stard8 within coordinates of
Tssr161595 1118 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233002317
MGI SNP Detail		 ChrX:98085103 Stard8 within coordinates of
Tssr161595 1107 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs251978913
MGI SNP Detail		 ChrX:98085109 Stard8 within coordinates of
Tssr161595 1101 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T
rs218646175
MGI SNP Detail		 ChrX:98085162 Stard8 within coordinates of
Tssr161595 1048 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs29084021
MGI SNP Detail		 ChrX:98085387 Stard8 within coordinates of
Tssr161595 823 bp upstream
 SNP C/G G G G G G G G G G G C G G G
rs29084020
MGI SNP Detail		 ChrX:98085400 Stard8 within coordinates of
Tssr161595 810 bp upstream
 SNP A/G G A A G A A G A A A A A G G
rs29084019
MGI SNP Detail		 ChrX:98085644 Stard8 within coordinates of
Tssr161595 566 bp upstream
 SNP A/G G G G G G G G G G G A G G G
rs212405051
MGI SNP Detail		 ChrX:98085740 Stard8 within coordinates of
Tssr161595 470 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs232364254
MGI SNP Detail		 ChrX:98085779 Stard8 within coordinates of
Tssr161595 431 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs29084018
MGI SNP Detail		 ChrX:98085830 Stard8 within coordinates of
Tssr161595 380 bp upstream
 SNP C/T C C C C C C T C C C T C C C
rs225335549
MGI SNP Detail		 ChrX:98085968 Stard8 within coordinates of
Tssr161595 242 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs248353851
MGI SNP Detail		 ChrX:98085990 Stard8 within coordinates of
Tssr161595 220 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs31845513
MGI SNP Detail		 ChrX:98086006 Stard8 within coordinates of
Tssr161595 204 bp upstream
 SNP C/T T T T T T T C T T T T T T
rs226251777
MGI SNP Detail		 ChrX:98086020 Stard8 within coordinates of
Tssr161595 190 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs238289319
MGI SNP Detail		 ChrX:98086159 Stard8 within coordinates of
Tssr161595 51 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs256184620
MGI SNP Detail		 ChrX:98086196 Stard8 within coordinates of
Tssr161595 14 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs226687363
MGI SNP Detail		 ChrX:98086210 Cpgi22849 within coordinates of
Stard8 within coordinates of
Tssr161595 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs239590937
MGI SNP Detail		 ChrX:98086224 Cpgi22849 within coordinates of
Stard8 within coordinates of
Tssr161595 5 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T
rs29084017
MGI SNP Detail		 ChrX:98086238 Cpgi22849 within coordinates of
Stard8 within coordinates of
Tssr161595 19 bp downstream
Tssr161596 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G G G G C G G G
rs232362705
MGI SNP Detail		 ChrX:98086246 Cpgi22849 within coordinates of
Stard8 within coordinates of
Tssr161595 27 bp downstream
Tssr161596 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G
rs257205930
MGI SNP Detail		 ChrX:98086255 Cpgi22849 within coordinates of
Stard8 within coordinates of
Tssr161595 36 bp downstream
Tssr161596 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A
rs29084016
MGI SNP Detail		 ChrX:98086356 Cpgi22849 within coordinates of
Stard8 within coordinates of
Tssr161595 137 bp downstream
 SNP C/T C C C C C C C C C T C C C
rs233673748
MGI SNP Detail		 ChrX:98086473 Cpgi22849 within coordinates of
Stard8 within coordinates of
Tssr161595 254 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242896115
MGI SNP Detail		 ChrX:98086631 Cpgi22849 within coordinates of
Stard8 within coordinates of
Tssr161595 412 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs211849048
MGI SNP Detail		 ChrX:98086639 Cpgi22849 within coordinates of
Stard8 within coordinates of
Tssr161595 420 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs231888359
MGI SNP Detail		 ChrX:98086655 Cpgi22849 within coordinates of
Stard8 within coordinates of
Tssr161595 436 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249998443
MGI SNP Detail		 ChrX:98086678 Cpgi22849 within coordinates of
Stard8 within coordinates of
Tssr161595 459 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs217473853
MGI SNP Detail		 ChrX:98086841 Stard8 within coordinates of
Tssr161595 622 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs238281545
MGI SNP Detail		 ChrX:98086923 Stard8 within coordinates of
Tssr161595 704 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs264427845
MGI SNP Detail		 ChrX:98086992 Stard8 within coordinates of
Tssr161595 773 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs225878809
MGI SNP Detail		 ChrX:98087034 Stard8 within coordinates of
Tssr161595 815 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs238149051
MGI SNP Detail		 ChrX:98087045 Stard8 within coordinates of
Tssr161595 826 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs249638635
MGI SNP Detail		 ChrX:98087103 Stard8 within coordinates of
Tssr161595 884 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220469162
MGI SNP Detail		 ChrX:98087104 Stard8 within coordinates of
Tssr161595 885 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs31845512
MGI SNP Detail		 ChrX:98087121 Stard8 within coordinates of
Tssr161595 902 bp downstream
 SNP C/G G G G G G G C G G G G G G G
rs262324008
MGI SNP Detail		 ChrX:98087139 Stard8 within coordinates of
Tssr161595 920 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs29084015
MGI SNP Detail		 ChrX:98087205 Stard8 within coordinates of
Tssr161595 986 bp downstream
 SNP A/T T T T T T A T T T T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs245272722
MGI SNP Detail		 ChrX:98087209 Stard8 within coordinates of
Tssr161595 990 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs266129787
MGI SNP Detail		 ChrX:98087242 Stard8 within coordinates of
Tssr161595 1023 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs29084014
MGI SNP Detail		 ChrX:98087292 Stard8 within coordinates of
Tssr161595 1073 bp downstream
 SNP C/T C T T C C T C T T C T
rs29088282
MGI SNP Detail		 ChrX:98087294 Stard8 within coordinates of
Tssr161595 1075 bp downstream
 SNP A/G A G G G A G A A A G G G G A A
rs579566934
MGI SNP Detail		 ChrX:98087358 Stard8 within coordinates of
Tssr161595 1139 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G
rs29088281
MGI SNP Detail		 ChrX:98087393 Stard8 within coordinates of
Tssr161595 1174 bp downstream
 SNP A/T T A A A A T A T T T A A A T A A T T
rs225891347
MGI SNP Detail		 ChrX:98087434 Stard8 within coordinates of
Tssr161595 1215 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs243594702
MGI SNP Detail		 ChrX:98087441 Stard8 within coordinates of
Tssr161595 1222 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31414205
MGI SNP Detail		 ChrX:98087559 Stard8 within coordinates of
Tssr161595 1340 bp downstream
 SNP C/T T C C T C T T T C C T C C T T
rs240302216
MGI SNP Detail		 ChrX:98087562 Stard8 within coordinates of
Tssr161595 1343 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs254935325
MGI SNP Detail		 ChrX:98087588 Stard8 within coordinates of
Tssr161595 1369 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T
rs218571928
MGI SNP Detail		 ChrX:98087614 Stard8 within coordinates of
Tssr161595 1395 bp downstream
Tssr161598 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29088280
MGI SNP Detail		 ChrX:98087750 Stard8 within coordinates of
Tssr161595 1531 bp downstream
 SNP A/G A A A A A A A A A G
rs583785449
MGI SNP Detail		 ChrX:98087817 Stard8 within coordinates of
Tssr161595 1598 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29088279
MGI SNP Detail		 ChrX:98087828 Stard8 within coordinates of
Tssr161595 1609 bp downstream
 SNP C/T T C C C T C C T C C C C C C T C
rs220333558
MGI SNP Detail		 ChrX:98087881 Stard8 within coordinates of
Tssr161595 1662 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29088278
MGI SNP Detail		 ChrX:98087896 Stard8 within coordinates of
Tssr161595 1677 bp downstream
 SNP A/G A G G A G A A G G A G G A A
rs263457995
MGI SNP Detail		 ChrX:98087926 Stard8 within coordinates of
Tssr161595 1707 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224894858
MGI SNP Detail		 ChrX:98087984 Stard8 within coordinates of
Tssr161595 1765 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs247663909
MGI SNP Detail		 ChrX:98088012 Stard8 within coordinates of
Tssr161595 1793 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264339331
MGI SNP Detail		 ChrX:98088060 Stard8 within coordinates of
Tssr161595 1841 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221947646
MGI SNP Detail		 ChrX:98088080 Stard8 within coordinates of
Tssr161595 1861 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs236631155
MGI SNP Detail		 ChrX:98088084 Stard8 within coordinates of
Tssr161595 1865 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs253642704
MGI SNP Detail		 ChrX:98088104 Stard8 within coordinates of
Tssr161595 1885 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
<< first < prev1 next > last >>
Showing SNP(s) 1 - 74 of 74
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory