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Mouse SNP Summary
Symbol
Name
ID 		Tssr161621
transcription start site region 161621
MGI:6089388

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Showing SNP(s) 1 - 55 of 55

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs261213607
MGI SNP Detail		 ChrX:99771613 Gm52438 within coordinates of
Tssr161621 1973 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs223069143
MGI SNP Detail		 ChrX:99771625 Gm52438 within coordinates of
Tssr161621 1961 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs238410549
MGI SNP Detail		 ChrX:99771653 Gm52438 within coordinates of
Tssr161621 1933 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs256304161
MGI SNP Detail		 ChrX:99771662 Gm52438 within coordinates of
Tssr161621 1924 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs226800987
MGI SNP Detail		 ChrX:99771665 Gm52438 within coordinates of
Tssr161621 1921 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33878046
MGI SNP Detail		 ChrX:99771674 Gm52438 within coordinates of
Tssr161621 1912 bp upstream
 SNP C/T T C C
rs265756519
MGI SNP Detail		 ChrX:99771764 Gm52438 within coordinates of
Tssr161621 1822 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A
rs231764198
MGI SNP Detail		 ChrX:99771844 Gm52438 within coordinates of
Tssr161621 1742 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs580356631
MGI SNP Detail		 ChrX:99771859 Gm52438 within coordinates of
Tssr161621 1727 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs29081592
MGI SNP Detail		 ChrX:99771860 Gm52438 within coordinates of
Tssr161621 1726 bp upstream
 SNP A/T A T T T A T A A T T T A A T A A T
rs29081591
MGI SNP Detail		 ChrX:99771891 Gm52438 within coordinates of
Tssr161621 1695 bp upstream
 SNP G/T T G G G T G T T T G G G T T G T T G
rs29081590
MGI SNP Detail		 ChrX:99771960 Gm52438 within coordinates of
Tssr161621 1626 bp upstream
 SNP A/G G A A A G A G G G A A A G G A G G G
rs31836141
MGI SNP Detail		 ChrX:99772008 Gm52438 within coordinates of
Tssr161621 1578 bp upstream
 SNP C/T T T T T T C T T T T T T T T
rs211970403
MGI SNP Detail		 ChrX:99772026 Gm52438 within coordinates of
Tssr161621 1560 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs238905893
MGI SNP Detail		 ChrX:99772041 Gm52438 within coordinates of
Tssr161621 1545 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31198705
MGI SNP Detail		 ChrX:99772066 Gm52438 within coordinates of
Tssr161621 1520 bp upstream
 SNP C/T C T T C T
rs216900451
MGI SNP Detail		 ChrX:99772161 Gm52438 within coordinates of
Tssr161621 1425 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31836140
MGI SNP Detail		 ChrX:99772201 Gm52438 within coordinates of
Tssr161621 1385 bp upstream
 SNP A/G A A A A A A G A A A A A A A A
rs31836139
MGI SNP Detail		 ChrX:99772253 Gm52438 within coordinates of
Tssr161621 1333 bp upstream
 SNP A/G G G G G G G A G G G G G G G G
rs222305090
MGI SNP Detail		 ChrX:99772294 Gm52438 within coordinates of
Tssr161621 1292 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs238469549
MGI SNP Detail		 ChrX:99772364 Gm52438 within coordinates of
Tssr161621 1222 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs249982939
MGI SNP Detail		 ChrX:99772423 Gm52438 within coordinates of
Tssr161621 1163 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs29081589
MGI SNP Detail		 ChrX:99772458 Gm52438 within coordinates of
Tssr161621 1128 bp upstream
 SNP G/T G T T T G T G G G T T T G G T G G T
rs31836138
MGI SNP Detail		 ChrX:99772470 Gm52438 within coordinates of
Tssr161621 1116 bp upstream
 SNP G/T G G G G G G G G G T G G T G
rs263745674
MGI SNP Detail		 ChrX:99772538 Gm52438 within coordinates of
Tssr161621 1048 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29081588
MGI SNP Detail		 ChrX:99772677 Gm52438 within coordinates of
Tssr161621 909 bp upstream
 SNP C/T C T T T T C T C T C T T T T C T T C T
rs248484757
MGI SNP Detail		 ChrX:99772739 Gm52438 within coordinates of
Tssr161621 847 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29081587
MGI SNP Detail		 ChrX:99772946 Tssr161621 640 bp upstream
 SNP G/T T G G G G T G T T T G G G T T G T T G
rs224446516
MGI SNP Detail		 ChrX:99773027 Tssr161621 559 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29081586
MGI SNP Detail		 ChrX:99773099 Tssr161621 487 bp upstream
 SNP A/T T T T T T T A T T T T T T T T
rs253869960
MGI SNP Detail		 ChrX:99773202 Tssr161621 384 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs230827619
MGI SNP Detail		 ChrX:99773252 Tssr161621 334 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs255091045
MGI SNP Detail		 ChrX:99773687 Gdpd2 within coordinates of
Tssr161621 87 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G
rs216490907
MGI SNP Detail		 ChrX:99773762 Gdpd2 within coordinates of
Tssr161621 162 bp downstream
Tssr161624 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239721799
MGI SNP Detail		 ChrX:99773778 Gdpd2 within coordinates of
Tssr161621 178 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs248548200
MGI SNP Detail		 ChrX:99773833 Gdpd2 within coordinates of
Tssr161621 233 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs216414089
MGI SNP Detail		 ChrX:99773869 Gdpd2 within coordinates of
Tssr161621 269 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs47530248
MGI SNP Detail		 ChrX:99773893 Gdpd2 within coordinates of
Tssr161621 293 bp downstream
 SNP G/T G T G T
rs250049912
MGI SNP Detail		 ChrX:99773937 Gdpd2 within coordinates of
Tssr161621 337 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs31836137
MGI SNP Detail		 ChrX:99773994 Gdpd2 within coordinates of
Tssr161621 394 bp downstream
 SNP C/T C C C C C C T C C C T C C T C
rs236518165
MGI SNP Detail		 ChrX:99774020 Gdpd2 within coordinates of
Tssr161621 420 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs263522668
MGI SNP Detail		 ChrX:99774037 Gdpd2 within coordinates of
Tssr161621 437 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs224437919
MGI SNP Detail		 ChrX:99774109 Gdpd2 within coordinates of
Tssr161621 509 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs251657919
MGI SNP Detail		 ChrX:99774204 Gdpd2 within coordinates of
Tssr161621 604 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs259180698
MGI SNP Detail		 ChrX:99774238 Gdpd2 within coordinates of
Tssr161621 638 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29081585
MGI SNP Detail		 ChrX:99774260 Gdpd2 within coordinates of
Tssr161621 660 bp downstream
 SNP A/G A G G G G A G G A G G G G A G G A G
rs583864662
MGI SNP Detail		 ChrX:99774374 Gdpd2 within coordinates of
Tssr161621 774 bp downstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs235946709
MGI SNP Detail		 ChrX:99774492 Gdpd2 within coordinates of
Tssr161621 892 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs256343878
MGI SNP Detail		 ChrX:99774531 Gdpd2 within coordinates of
Tssr161621 931 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231155915
MGI SNP Detail		 ChrX:99774534 Gdpd2 within coordinates of
Tssr161621 934 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs250651206
MGI SNP Detail		 ChrX:99774609 Gdpd2 within coordinates of
Tssr161621 1009 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs265688406
MGI SNP Detail		 ChrX:99774986 Gdpd2 within coordinates of
Tssr161621 1386 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A
rs231520632
MGI SNP Detail		 ChrX:99775504 Gdpd2 within coordinates of
Tssr161621 1904 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs31836136
MGI SNP Detail		 ChrX:99775538 Gdpd2 within coordinates of
Tssr161621 1938 bp downstream
 SNP C/T C C C C C C T C C C C C C C C
rs216471239
MGI SNP Detail		 ChrX:99775599 Gdpd2 within coordinates of
Tssr161621 1999 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
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Showing SNP(s) 1 - 55 of 55
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory