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Mouse SNP Summary
Symbol
Name
ID 		Tssr161663
transcription start site region 161663
MGI:6089430

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Showing SNP(s) 1 - 48 of 48

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs242281763
MGI SNP Detail		 ChrX:100426605 Gjb1 within coordinates of
Tssr161663 1491 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs256423396
MGI SNP Detail		 ChrX:100426638 Gjb1 within coordinates of
Tssr161663 1458 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29081646
MGI SNP Detail		 ChrX:100426653 Gjb1 within coordinates of
Tssr161663 1443 bp upstream
 SNP A/C C C C C C C A C C C A C C A C
rs29081645
MGI SNP Detail		 ChrX:100426749 Gjb1 within coordinates of
Tssr161663 1347 bp upstream
 SNP C/T C C C C C C T C C C T C C T C
rs31834731
MGI SNP Detail		 ChrX:100426812 Gjb1 within coordinates of
Tssr161663 1284 bp upstream
 SNP A/C C C C C C C C C C C C C C A C
rs29081644
MGI SNP Detail		 ChrX:100426826 Gjb1 within coordinates of
Tssr161663 1270 bp upstream
 SNP A/G G G G G G G A G G G A G G A G
rs239647161
MGI SNP Detail		 ChrX:100426829 Gjb1 within coordinates of
Tssr161663 1267 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs259509178
MGI SNP Detail		 ChrX:100427009 Gjb1 within coordinates of
Tssr161663 1087 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29081103
MGI SNP Detail		 ChrX:100427013 Gjb1 within coordinates of
Tssr161663 1083 bp upstream
 SNP C/T T T T T T T T T T T C T T C T
rs31834730
MGI SNP Detail		 ChrX:100427033 Gjb1 within coordinates of
Tssr161663 1063 bp upstream
 SNP A/G G G G G G G G G G G G G G A G
rs261307641
MGI SNP Detail		 ChrX:100427404 Gjb1 within coordinates of
Tssr161660 within coordinates of
Tssr161663 692 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29081102
MGI SNP Detail		 ChrX:100427642 Gjb1 within coordinates of
Tssr161663 454 bp upstream
 SNP A/G G G G G G G G G G G A G G A G
rs244843058
MGI SNP Detail		 ChrX:100427887 Gjb1 within coordinates of
Tssr161663 209 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215829730
MGI SNP Detail		 ChrX:100427908 Gjb1 within coordinates of
Tssr161661 within coordinates of
Tssr161663 188 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs8238299
MGI SNP Detail		 ChrX:100428058 Gjb1 within coordinates of
Tssr161662 within coordinates of
Tssr161663 38 bp upstream
 SNP A/T A A A A A A A T
rs248812020
MGI SNP Detail		 ChrX:100428454 Cpgi22867 within coordinates of
Gjb1 within coordinates of
Tssr161663 340 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs216681032
MGI SNP Detail		 ChrX:100428472 Cpgi22867 within coordinates of
Gjb1 within coordinates of
Tssr161663 358 bp downstream
Tssr161665 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs239537282
MGI SNP Detail		 ChrX:100428490 Cpgi22867 within coordinates of
Gjb1 within coordinates of
Tssr161663 376 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs8238300
MGI SNP Detail		 ChrX:100428617 Cpgi22867 within coordinates of
Gjb1 within coordinates of
Tssr161663 503 bp downstream
 SNP C/G G C G G G G G G G
rs261610390
MGI SNP Detail		 ChrX:100428634 Cpgi22867 within coordinates of
Gjb1 within coordinates of
Tssr161663 520 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs212161097
MGI SNP Detail		 ChrX:100428761 Gjb1 within coordinates of
Tssr161663 647 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs239236350
MGI SNP Detail		 ChrX:100428890 Gjb1 within coordinates of
Tssr161663 776 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T T T T T T
rs249972455
MGI SNP Detail		 ChrX:100428899 Gjb1 within coordinates of
Tssr161663 785 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs221636364
MGI SNP Detail		 ChrX:100428905 Gjb1 within coordinates of
Tssr161663 791 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs239582945
MGI SNP Detail		 ChrX:100428998 Gjb1 within coordinates of
Tssr161663 884 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs253490385
MGI SNP Detail		 ChrX:100429239 Tssr161663 1125 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs582832369
MGI SNP Detail		 ChrX:100429270 Tssr161663 1156 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs226673321
MGI SNP Detail		 ChrX:100429280 Tssr161663 1166 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs241721365
MGI SNP Detail		 ChrX:100429376 Tssr161663 1262 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31834729
MGI SNP Detail		 ChrX:100429471 Tssr161663 1357 bp downstream
 SNP C/G G G G G G G C G G G G G G G
rs31834728
MGI SNP Detail		 ChrX:100429508 Tssr161663 1394 bp downstream
 SNP A/G A A A G A G A A
rs238671489
MGI SNP Detail		 ChrX:100429558 Tssr161663 1444 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs587495640
MGI SNP Detail		 ChrX:100429582 Tssr161663 1468 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G
rs259771218
MGI SNP Detail		 ChrX:100429746 Tssr161663 1632 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs227257953
MGI SNP Detail		 ChrX:100429830 Tssr161663 1716 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs248697742
MGI SNP Detail		 ChrX:100429836 Tssr161663 1722 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs217912275
MGI SNP Detail		 ChrX:100429841 Tssr161663 1727 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs229214112
MGI SNP Detail		 ChrX:100429842 Tssr161663 1728 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs249957209
MGI SNP Detail		 ChrX:100429860 Tssr161663 1746 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs212392339
MGI SNP Detail		 ChrX:100429865 Tssr161663 1751 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G G G G G G G G G G G G G
rs232265090
MGI SNP Detail		 ChrX:100429876 Tssr161663 1762 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A A A C A A A A A A A C A A A A
rs249905910
MGI SNP Detail		 ChrX:100429895 Tssr161663 1781 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T
rs216105038
MGI SNP Detail		 ChrX:100429931 Tssr161663 1817 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs233076725
MGI SNP Detail		 ChrX:100429935 Tssr161663 1821 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs253438464
MGI SNP Detail		 ChrX:100429948 Tssr161663 1834 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs226142995
MGI SNP Detail		 ChrX:100430066 Tssr161663 1952 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs237567731
MGI SNP Detail		 ChrX:100430087 Tssr161663 1973 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs255176443
MGI SNP Detail		 ChrX:100430105 Tssr161663 1991 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
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Showing SNP(s) 1 - 48 of 48
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory