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Mouse SNP Summary
Symbol
Name
ID
Tssr162441
transcription start site region 162441
MGI:6090208

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Showing SNP(s) 1 - 61 of 61

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs226832931
MGI SNP Detail
ChrX:156480293 Tssr162441 1909 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs247209664
MGI SNP Detail
ChrX:156480336 Tssr162441 1866 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs579484784
MGI SNP Detail
ChrX:156480484 Tssr162441 1718 bp upstream
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs265997376
MGI SNP Detail
ChrX:156480601 Tssr162441 1601 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29310201
MGI SNP Detail
ChrX:156480621 Tssr162441 1581 bp upstream
SNP C/G G G G G G G C G G G C G G C G
rs29310200
MGI SNP Detail
ChrX:156480663 Tssr162441 1539 bp upstream
SNP A/G G G G G G G A G G G A G G A G
rs256704319
MGI SNP Detail
ChrX:156480671 Tssr162441 1531 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T
rs225724495
MGI SNP Detail
ChrX:156480704 Tssr162441 1498 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246006133
MGI SNP Detail
ChrX:156480715 Tssr162441 1487 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs263220507
MGI SNP Detail
ChrX:156480734 Tssr162441 1468 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs235141972
MGI SNP Detail
ChrX:156480745 Tssr162441 1457 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs254137140
MGI SNP Detail
ChrX:156480770 Tssr162441 1432 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C
rs213067889
MGI SNP Detail
ChrX:156480951 Tssr162441 1251 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29310199
MGI SNP Detail
ChrX:156481158 Tssr162441 1044 bp upstream
SNP A/T A A A A A A T A A A T A A T T
rs245640686
MGI SNP Detail
ChrX:156481201 Tssr162441 1001 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A G A A G A A A A A A A G A A G A
rs213579502
MGI SNP Detail
ChrX:156481222 Tssr162441 980 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C
rs583226625
MGI SNP Detail
ChrX:156481275 Tssr162441 927 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs234760290
MGI SNP Detail
ChrX:156481295 Tssr162441 907 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252500139
MGI SNP Detail
ChrX:156481380 Tssr162441 822 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G
rs29310198
MGI SNP Detail
ChrX:156481384 Tssr162441 818 bp upstream
SNP A/G A A A A A G A A A G A A G A
rs241791074
MGI SNP Detail
ChrX:156481497 Tssr162441 705 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs29310197
MGI SNP Detail
ChrX:156481534 Tssr162441 668 bp upstream
SNP C/T T T T T T T C T T T C C C C C T C
rs29310196
MGI SNP Detail
ChrX:156481586 Tssr162441 616 bp upstream
SNP A/C C C C C C C C A C C A
rs29310195
MGI SNP Detail
ChrX:156481587 Tssr162441 615 bp upstream
SNP A/G A A A A A A G A A A G G G A G
rs29310194
MGI SNP Detail
ChrX:156481601 Tssr162441 601 bp upstream
SNP A/C C C C C C C C C C C C C C C A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs219654994
MGI SNP Detail
ChrX:156481615 Tssr162441 587 bp upstream
SNP C/T C C C C C C T T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C
rs240451535
MGI SNP Detail
ChrX:156481772 Tssr162441 430 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs265522867
MGI SNP Detail
ChrX:156481798 Tssr162441 404 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs233967471
MGI SNP Detail
ChrX:156481826 Tssr162441 376 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs259348689
MGI SNP Detail
ChrX:156482035 Smpx within coordinates of
Tssr162441 167 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T
rs29313712
MGI SNP Detail
ChrX:156482099 Smpx within coordinates of
Tssr162441 103 bp upstream
SNP A/G G G G G G G G G G G A G A A G G G
rs29313711
MGI SNP Detail
ChrX:156482141 Smpx within coordinates of
Tssr162441 61 bp upstream
SNP C/T T T T T T C T T T C T T C
rs245577418
MGI SNP Detail
ChrX:156482176 Smpx within coordinates of
Tssr162441 26 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213569011
MGI SNP Detail
ChrX:156482232 Smpx within coordinates of
Tssr162441 19 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29313710
MGI SNP Detail
ChrX:156482242 Smpx within coordinates of
Tssr162441 29 bp downstream
SNP C/T C C C C C C C C C C C C T C
rs246478295
MGI SNP Detail
ChrX:156482243 Smpx within coordinates of
Tssr162441 30 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218671045
MGI SNP Detail
ChrX:156482484 Smpx within coordinates of
Tssr162441 271 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A C A A A A A A C A A A A A A A A A A A
rs581815141
MGI SNP Detail
ChrX:156482498 Smpx within coordinates of
Tssr162441 285 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239132132
MGI SNP Detail
ChrX:156482505 Smpx within coordinates of
Tssr162441 292 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs261298486
MGI SNP Detail
ChrX:156482519 Smpx within coordinates of
Tssr162441 306 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs211792508
MGI SNP Detail
ChrX:156482530 Smpx within coordinates of
Tssr162441 317 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs231938248
MGI SNP Detail
ChrX:156482641 Smpx within coordinates of
Tssr162441 428 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs250731396
MGI SNP Detail
ChrX:156482691 Smpx within coordinates of
Tssr162441 478 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A A A C A A A A A A A A A A A A
rs219644483
MGI SNP Detail
ChrX:156482789 Smpx within coordinates of
Tssr162441 576 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs240387975
MGI SNP Detail
ChrX:156482827 Smpx within coordinates of
Tssr162441 614 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259039261
MGI SNP Detail
ChrX:156482920 Smpx within coordinates of
Tssr162441 707 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs227637346
MGI SNP Detail
ChrX:156482935 Smpx within coordinates of
Tssr162441 722 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs247478006
MGI SNP Detail
ChrX:156482970 Smpx within coordinates of
Tssr162441 757 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264883579
MGI SNP Detail
ChrX:156482977 Smpx within coordinates of
Tssr162441 764 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs224377561
MGI SNP Detail
ChrX:156483035 Smpx within coordinates of
Tssr162441 822 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs239941856
MGI SNP Detail
ChrX:156483062 Smpx within coordinates of
Tssr162441 849 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs257404645
MGI SNP Detail
ChrX:156483153 Smpx within coordinates of
Tssr162441 940 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228033957
MGI SNP Detail
ChrX:156483160 Smpx within coordinates of
Tssr162441 947 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs29313709
MGI SNP Detail
ChrX:156483330 Smpx within coordinates of
Tssr162441 1117 bp downstream
SNP C/G C C C C C G C C C C C C C C
rs219115071
MGI SNP Detail
ChrX:156483477 Smpx within coordinates of
Tssr162441 1264 bp downstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs29313708
MGI SNP Detail
ChrX:156483572 Smpx within coordinates of
Tssr162441 1359 bp downstream
SNP C/G C C C C C C C C C C G C C G C
rs249524718
MGI SNP Detail
ChrX:156483783 Smpx within coordinates of
Tssr162441 1570 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs211781164
MGI SNP Detail
ChrX:156483974 Smpx within coordinates of
Tssr162441 1761 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231929525
MGI SNP Detail
ChrX:156484024 Smpx within coordinates of
Tssr162441 1811 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs249501463
MGI SNP Detail
ChrX:156484057 Smpx within coordinates of
Tssr162441 1844 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29313707
MGI SNP Detail
ChrX:156484212 Smpx within coordinates of
Tssr162441 1999 bp downstream
SNP C/G C C C C C C G C C C G C C G C
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Showing SNP(s) 1 - 61 of 61

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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory