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Mouse SNP Summary
Symbol
Name
ID 		Tssr162530
transcription start site region 162530
MGI:6090297

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Showing SNP(s) 1 - 61 of 61

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs212610915
MGI SNP Detail		 ChrX:158724054 Sh3kbp1 within coordinates of
Tssr162530 1847 bp upstream
 SNP A/G G G G G G A A G G G G G G G G G G G G G G G G G G G G G A G G A G A G G G G G G A G G G A G G G G G A A
rs233152657
MGI SNP Detail		 ChrX:158724127 Sh3kbp1 within coordinates of
Tssr162530 1774 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs251380930
MGI SNP Detail		 ChrX:158724218 Sh3kbp1 within coordinates of
Tssr162530 1683 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs216073478
MGI SNP Detail		 ChrX:158724283 Sh3kbp1 within coordinates of
Tssr162530 1618 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234062996
MGI SNP Detail		 ChrX:158724322 Sh3kbp1 within coordinates of
Tssr162530 1579 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs264249330
MGI SNP Detail		 ChrX:158724335 Sh3kbp1 within coordinates of
Tssr162530 1566 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs225757287
MGI SNP Detail		 ChrX:158724421 Sh3kbp1 within coordinates of
Tssr162530 1480 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs245020678
MGI SNP Detail		 ChrX:158724436 Sh3kbp1 within coordinates of
Tssr162530 1465 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs255441129
MGI SNP Detail		 ChrX:158724466 Sh3kbp1 within coordinates of
Tssr162530 1435 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs219960123
MGI SNP Detail		 ChrX:158724517 Sh3kbp1 within coordinates of
Tssr162530 1384 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs237349600
MGI SNP Detail		 ChrX:158724536 Sh3kbp1 within coordinates of
Tssr162530 1365 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs257900418
MGI SNP Detail		 ChrX:158724596 Sh3kbp1 within coordinates of
Tssr162530 1305 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs220538105
MGI SNP Detail		 ChrX:158724780 Sh3kbp1 within coordinates of
Tssr162530 1121 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241276803
MGI SNP Detail		 ChrX:158724786 Sh3kbp1 within coordinates of
Tssr162530 1115 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs265844409
MGI SNP Detail		 ChrX:158724876 Sh3kbp1 within coordinates of
Tssr162530 1025 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs228258726
MGI SNP Detail		 ChrX:158724903 Sh3kbp1 within coordinates of
Tssr162530 998 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs254690444
MGI SNP Detail		 ChrX:158724960 Sh3kbp1 within coordinates of
Tssr162530 941 bp upstream
 SNP A/G G G G G G G A A G G G G G G G G G G A G G A G G G G A G A G G A A A G G G G G A A G G G A G G A G G A A
rs261708446
MGI SNP Detail		 ChrX:158724991 Sh3kbp1 within coordinates of
Tssr162530 910 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226892170
MGI SNP Detail		 ChrX:158725029 Sh3kbp1 within coordinates of
Tssr162530 872 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs245249749
MGI SNP Detail		 ChrX:158725121 Sh3kbp1 within coordinates of
Tssr162530 780 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs216108503
MGI SNP Detail		 ChrX:158725146 Sh3kbp1 within coordinates of
Tssr162530 755 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs234115818
MGI SNP Detail		 ChrX:158725225 Sh3kbp1 within coordinates of
Tssr162530 676 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254842500
MGI SNP Detail		 ChrX:158725259 Sh3kbp1 within coordinates of
Tssr162530 642 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs218212045
MGI SNP Detail		 ChrX:158725280 Sh3kbp1 within coordinates of
Tssr162530 621 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs235477300
MGI SNP Detail		 ChrX:158725333 Sh3kbp1 within coordinates of
Tssr162530 568 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs260874240
MGI SNP Detail		 ChrX:158725412 Sh3kbp1 within coordinates of
Tssr162530 489 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs3667080
MGI SNP Detail		 ChrX:158725425 Sh3kbp1 within coordinates of
Tssr162530 476 bp upstream
 SNP G/T T G
rs231341164
MGI SNP Detail		 ChrX:158725449 Sh3kbp1 within coordinates of
Tssr162530 452 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs251825985
MGI SNP Detail		 ChrX:158725480 Sh3kbp1 within coordinates of
Tssr162530 421 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs220617108
MGI SNP Detail		 ChrX:158725505 Sh3kbp1 within coordinates of
Tssr162530 396 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250959958
MGI SNP Detail		 ChrX:158725554 Sh3kbp1 within coordinates of
Tssr162530 347 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs263888826
MGI SNP Detail		 ChrX:158725567 Sh3kbp1 within coordinates of
Tssr162530 334 bp upstream
 SNP A/G G G G G G G A A G G G G G G G G G G G G G G G G G G G G G A G G A G A G G G G G G A G G G A G G A G G A A
rs220679816
MGI SNP Detail		 ChrX:158725849 Sh3kbp1 within coordinates of
Tssr162528 within coordinates of
Tssr162530 52 bp upstream
 SNP A/G A A A A A A G G A A A A A A A A A A A G A A G A A A A G A G A A G G G A A A A A G G A A A G A A G A A G
rs240806717
MGI SNP Detail		 ChrX:158725920 Sh3kbp1 within coordinates of
Tssr162530 5 bp downstream
Tssr162531 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs264760754
MGI SNP Detail		 ChrX:158725937 Sh3kbp1 within coordinates of
Tssr162530 22 bp downstream
Tssr162531 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs226928711
MGI SNP Detail		 ChrX:158726001 Sh3kbp1 within coordinates of
Tssr162530 86 bp downstream
Tssr162534 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245283219
MGI SNP Detail		 ChrX:158726127 Sh3kbp1 within coordinates of
Tssr162530 212 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs29306500
MGI SNP Detail		 ChrX:158726277 Sh3kbp1 within coordinates of
Tssr162530 362 bp downstream
 SNP C/T T T T T T T C T T T T T T T T
rs227600803
MGI SNP Detail		 ChrX:158726389 Sh3kbp1 within coordinates of
Tssr162530 474 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29306499
MGI SNP Detail		 ChrX:158726540 Sh3kbp1 within coordinates of
Tssr162530 625 bp downstream
 SNP A/G G G G A G G A G G G A A G A A
rs218222327
MGI SNP Detail		 ChrX:158726681 Sh3kbp1 within coordinates of
Tssr162530 766 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T
rs237371853
MGI SNP Detail		 ChrX:158726749 Sh3kbp1 within coordinates of
Tssr162530 834 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A
rs249172230
MGI SNP Detail		 ChrX:158726804 Sh3kbp1 within coordinates of
Tssr162530 889 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A
rs214405433
MGI SNP Detail		 ChrX:158726889 Sh3kbp1 within coordinates of
Tssr162530 974 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T
rs231415705
MGI SNP Detail		 ChrX:158727143 Sh3kbp1 within coordinates of
Tssr162530 1228 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251898737
MGI SNP Detail		 ChrX:158727155 Sh3kbp1 within coordinates of
Tssr162530 1240 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220652735
MGI SNP Detail		 ChrX:158727213 Sh3kbp1 within coordinates of
Tssr162530 1298 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs240139967
MGI SNP Detail		 ChrX:158727430 Sh3kbp1 within coordinates of
Tssr162530 1515 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T C
rs263673211
MGI SNP Detail		 ChrX:158727440 Sh3kbp1 within coordinates of
Tssr162530 1525 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs221197030
MGI SNP Detail		 ChrX:158727499 Sh3kbp1 within coordinates of
Tssr162530 1584 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs243652050
MGI SNP Detail		 ChrX:158727531 Sh3kbp1 within coordinates of
Tssr162530 1616 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs251633943
MGI SNP Detail		 ChrX:158727606 Sh3kbp1 within coordinates of
Tssr162530 1691 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs219260608
MGI SNP Detail		 ChrX:158727619 Sh3kbp1 within coordinates of
Tssr162530 1704 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs45892981
MGI SNP Detail		 ChrX:158727623 Sh3kbp1 within coordinates of
Tssr162530 1708 bp downstream
 SNP G/T G T G
rs239296653
MGI SNP Detail		 ChrX:158727681 Sh3kbp1 within coordinates of
Tssr162530 1766 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs260247834
MGI SNP Detail		 ChrX:158727709 Sh3kbp1 within coordinates of
Tssr162530 1794 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs232448989
MGI SNP Detail		 ChrX:158727745 Sh3kbp1 within coordinates of
Tssr162530 1830 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs248637153
MGI SNP Detail		 ChrX:158727785 Sh3kbp1 within coordinates of
Tssr162530 1870 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs265981668
MGI SNP Detail		 ChrX:158727812 Sh3kbp1 within coordinates of
Tssr162530 1897 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs228987198
MGI SNP Detail		 ChrX:158727813 Sh3kbp1 within coordinates of
Tssr162530 1898 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs252903117
MGI SNP Detail		 ChrX:158727887 Sh3kbp1 within coordinates of
Tssr162530 1972 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 61 of 61
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory