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Mouse SNP Summary
Symbol
Name
ID 		Tssr162605
transcription start site region 162605
MGI:6090372

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs240148412
MGI SNP Detail		 ChrX:162739865 Tssr162605 1875 bp upstream
Zrsr2 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C
rs259190787
MGI SNP Detail		 ChrX:162739884 Tssr162605 1856 bp upstream
Zrsr2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G
rs31415327
MGI SNP Detail		 ChrX:162739921 Tssr162605 1819 bp upstream
Zrsr2 within coordinates of
 SNP C/T C C C C C C T C C C
rs242495896
MGI SNP Detail		 ChrX:162740009 Tssr162605 1731 bp upstream
Zrsr2 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs264590916
MGI SNP Detail		 ChrX:162740091 Tssr162605 1649 bp upstream
Zrsr2 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A G A A A A A A A A A A A A
rs228638943
MGI SNP Detail		 ChrX:162740204 Rr8437 within coordinates of
Tssr162605 1536 bp upstream
Zrsr2 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs255218491
MGI SNP Detail		 ChrX:162740231 Rr8437 within coordinates of
Tssr162605 1509 bp upstream
Zrsr2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214783784
MGI SNP Detail		 ChrX:162740239 Rr8437 within coordinates of
Tssr162605 1501 bp upstream
Zrsr2 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs239569517
MGI SNP Detail		 ChrX:162740240 Rr8437 within coordinates of
Tssr162605 1500 bp upstream
Zrsr2 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs246911006
MGI SNP Detail		 ChrX:162740286 Rr8437 within coordinates of
Tssr162605 1454 bp upstream
Zrsr2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216395260
MGI SNP Detail		 ChrX:162740302 Rr8437 within coordinates of
Tssr162605 1438 bp upstream
Zrsr2 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs236120330
MGI SNP Detail		 ChrX:162740303 Rr8437 within coordinates of
Tssr162605 1437 bp upstream
Zrsr2 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs249399370
MGI SNP Detail		 ChrX:162740338 Rr8437 within coordinates of
Tssr162605 1402 bp upstream
Zrsr2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs221384075
MGI SNP Detail		 ChrX:162740340 Rr8437 within coordinates of
Tssr162605 1400 bp upstream
Zrsr2 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs586590765
MGI SNP Detail		 ChrX:162740415 Rr8437 within coordinates of
Tssr162605 1325 bp upstream
Zrsr2 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs236493734
MGI SNP Detail		 ChrX:162740434 Rr8437 within coordinates of
Tssr162605 1306 bp upstream
Zrsr2 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G G G G G G G G C G G G G G G G G G G G
rs262656702
MGI SNP Detail		 ChrX:162740461 Rr8437 within coordinates of
Tssr162605 1279 bp upstream
Zrsr2 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs224607572
MGI SNP Detail		 ChrX:162740464 Rr8437 within coordinates of
Tssr162605 1276 bp upstream
Zrsr2 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs240412763
MGI SNP Detail		 ChrX:162740504 Rr8437 within coordinates of
Tssr162605 1236 bp upstream
Zrsr2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G A G G G G
rs259049762
MGI SNP Detail		 ChrX:162740516 Rr8437 within coordinates of
Tssr162605 1224 bp upstream
Zrsr2 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C T C C C C
rs222792538
MGI SNP Detail		 ChrX:162740590 Rr8437 within coordinates of
Tssr162605 1150 bp upstream
Zrsr2 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs31415330
MGI SNP Detail		 ChrX:162740608 Rr8437 within coordinates of
Tssr162605 1132 bp upstream
Zrsr2 within coordinates of
 SNP C/T T T T T T C T C T
rs262051148
MGI SNP Detail		 ChrX:162740646 Rr8437 within coordinates of
Tssr162605 1094 bp upstream
Zrsr2 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C
rs229075438
MGI SNP Detail		 ChrX:162740683 Cpgi23043 within coordinates of
Rr8437 within coordinates of
Tssr162605 1057 bp upstream
Zrsr2 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C
rs243047149
MGI SNP Detail		 ChrX:162740711 Cpgi23043 within coordinates of
Rr8437 within coordinates of
Tssr162605 1029 bp upstream
Zrsr2 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs265253599
MGI SNP Detail		 ChrX:162740746 Cpgi23043 within coordinates of
Rr8437 within coordinates of
Tssr162605 994 bp upstream
Zrsr2 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A A A A A A A A C A A A A A A A C A A A A
rs227282770
MGI SNP Detail		 ChrX:162740748 Cpgi23043 within coordinates of
Rr8437 within coordinates of
Tssr162605 992 bp upstream
Zrsr2 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A A A A A A A A C A A A A A A A C A A A A
rs247234438
MGI SNP Detail		 ChrX:162740812 Cpgi23043 within coordinates of
Rr8437 within coordinates of
Tssr162605 928 bp upstream
Zrsr2 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T T T T T T T T G T T T T T T T G T T T T
rs216355743
MGI SNP Detail		 ChrX:162740817 Cpgi23043 within coordinates of
Rr8437 within coordinates of
Tssr162605 923 bp upstream
Zrsr2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228960685
MGI SNP Detail		 ChrX:162740850 Cpgi23043 within coordinates of
Rr8437 within coordinates of
Tssr162605 890 bp upstream
Zrsr2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs252173163
MGI SNP Detail		 ChrX:162740872 Cpgi23043 within coordinates of
Rr8437 within coordinates of
Tssr162605 868 bp upstream
Zrsr2 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G
rs212643527
MGI SNP Detail		 ChrX:162740874 Cpgi23043 within coordinates of
Rr8437 within coordinates of
Tssr162605 866 bp upstream
Zrsr2 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs238430452
MGI SNP Detail		 ChrX:162740921 Cpgi23043 within coordinates of
Rr8437 within coordinates of
Tssr162605 819 bp upstream
Zrsr2 within coordinates of
 SNP G/T T T T T G T G G T T T T T T T T T T T G T G T T T T T T T G T T T G T T T T T G T T T G G G T T T T T T
rs258083586
MGI SNP Detail		 ChrX:162740926 Cpgi23043 within coordinates of
Rr8437 within coordinates of
Tssr162605 814 bp upstream
Zrsr2 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs580926871
MGI SNP Detail		 ChrX:162741016 Cpgi23043 within coordinates of
Gm38561 within coordinates of
Rr8437 within coordinates of
Tssr162605 724 bp upstream
Zrsr2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs216522799
MGI SNP Detail		 ChrX:162741058 Cpgi23043 within coordinates of
Gm38561 within coordinates of
Rr8437 within coordinates of
Tssr162605 682 bp upstream
Zrsr2 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C G C C C C C C C G C C C C
rs583419724
MGI SNP Detail		 ChrX:162741061 Cpgi23043 within coordinates of
Gm38561 within coordinates of
Rr8437 within coordinates of
Tssr162605 679 bp upstream
Zrsr2 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs587076608
MGI SNP Detail		 ChrX:162741076 Cpgi23043 within coordinates of
Gm38561 within coordinates of
Rr8437 within coordinates of
Tssr162605 664 bp upstream
Zrsr2 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs233881312
MGI SNP Detail		 ChrX:162741081 Cpgi23043 within coordinates of
Gm38561 within coordinates of
Rr8437 within coordinates of
Tssr162605 659 bp upstream
Zrsr2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs581172535
MGI SNP Detail		 ChrX:162741085 Cpgi23043 within coordinates of
Gm38561 within coordinates of
Rr8437 within coordinates of
Tssr162605 655 bp upstream
Tssr164522 within coordinates of
Zrsr2 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs584626852
MGI SNP Detail		 ChrX:162741095 Cpgi23043 within coordinates of
Gm38561 within coordinates of
Rr8437 within coordinates of
Tssr162605 645 bp upstream
Tssr164522 within coordinates of
Zrsr2 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A G A A A A A A A A A A A A
rs252903949
MGI SNP Detail		 ChrX:162741096 Cpgi23043 within coordinates of
Gm38561 within coordinates of
Rr8437 within coordinates of
Tssr162605 644 bp upstream
Tssr164522 within coordinates of
Zrsr2 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G T G G G G G T G G G G G G G G G G G G
rs222753828
MGI SNP Detail		 ChrX:162741098 Cpgi23043 within coordinates of
Gm38561 within coordinates of
Rr8437 within coordinates of
Tssr162605 642 bp upstream
Tssr164522 within coordinates of
Zrsr2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G A G G G G G A G G G G G G G G G G G
rs235988865
MGI SNP Detail		 ChrX:162741116 Cpgi23043 within coordinates of
Gm38561 within coordinates of
Rr8437 within coordinates of
Tssr162605 624 bp upstream
Tssr164522 within coordinates of
Zrsr2 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A G A A A A A G A A A A A A A G A A A
rs579204384
MGI SNP Detail		 ChrX:162741121 Cpgi23043 within coordinates of
Gm38561 within coordinates of
Rr8437 within coordinates of
Tssr162605 619 bp upstream
Tssr164522 within coordinates of
Zrsr2 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs261660173
MGI SNP Detail		 ChrX:162741144 Cpgi23043 within coordinates of
Gm38561 within coordinates of
Rr8437 within coordinates of
Tssr162605 596 bp upstream
Zrsr2 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs254560571
MGI SNP Detail		 ChrX:162741244 Cpgi23043 within coordinates of
Gm38561 within coordinates of
Rr8437 within coordinates of
Tssr162604 within coordinates of
Tssr162605 496 bp upstream
Zrsr2 within coordinates of
 SNP G/T G T
rs585330369
MGI SNP Detail		 ChrX:162741282 Cpgi23043 within coordinates of
Gm38561 within coordinates of
Gm56686 within coordinates of
Rr8437 within coordinates of
Tssr162604 within coordinates of
Tssr162605 458 bp upstream
Zrsr2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222700581
MGI SNP Detail		 ChrX:162741297 Cpgi23043 within coordinates of
Gm38561 within coordinates of
Gm56686 within coordinates of
Rr8437 within coordinates of
Tssr162604 within coordinates of
Tssr162605 443 bp upstream
Zrsr2 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T C T T C T T T T T T T C T T T T T T C T T T T T T T T T T
rs247088176
MGI SNP Detail		 ChrX:162741328 Cpgi23043 within coordinates of
Gm38561 within coordinates of
Gm56686 within coordinates of
Rr8437 within coordinates of
Tssr162605 412 bp upstream
Zrsr2 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs262700309
MGI SNP Detail		 ChrX:162741337 Cpgi23043 within coordinates of
Gm38561 within coordinates of
Gm56686 within coordinates of
Rr8437 within coordinates of
Tssr162605 403 bp upstream
Zrsr2 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G G G G G G G G C G G G G G G G C G G G G
rs31415333
MGI SNP Detail		 ChrX:162741371 Cpgi23043 within coordinates of
Gm38561 within coordinates of
Gm56686 within coordinates of
Rr8437 within coordinates of
Tssr162605 369 bp upstream
Zrsr2 within coordinates of
 SNP A/G A A A A A G A A A
rs241220416
MGI SNP Detail		 ChrX:162741630 Cpgi23043 within coordinates of
Gm38561 within coordinates of
Gm56686 within coordinates of
Rr8437 within coordinates of
Tssr162605 110 bp upstream
Tssr164526 within coordinates of
Zrsr2 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A
rs260641789
MGI SNP Detail		 ChrX:162741638 Cpgi23043 within coordinates of
Gm38561 within coordinates of
Gm56686 within coordinates of
Rr8437 within coordinates of
Tssr162605 102 bp upstream
Tssr164526 within coordinates of
Zrsr2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs228928534
MGI SNP Detail		 ChrX:162741648 Gm38561 within coordinates of
Gm56686 within coordinates of
Rr8437 within coordinates of
Tssr162605 92 bp upstream
Tssr164526 within coordinates of
Zrsr2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs248907037
MGI SNP Detail		 ChrX:162741652 Gm38561 within coordinates of
Gm56686 within coordinates of
Rr8437 within coordinates of
Tssr162605 88 bp upstream
Tssr164526 within coordinates of
Zrsr2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G A G G G G G G G G G G G
rs212856564
MGI SNP Detail		 ChrX:162741710 Gm38561 within coordinates of
Gm56686 within coordinates of
Rr8437 within coordinates of
Tssr162605 30 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C T C C C C C C C T C C C
rs229526075
MGI SNP Detail		 ChrX:162741740 Gm38561 within coordinates of
Gm56686 within coordinates of
Rr8437 within coordinates of
Tssr162605 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs256033898
MGI SNP Detail		 ChrX:162741742 Gm38561 within coordinates of
Gm56686 within coordinates of
Rr8437 within coordinates of
Tssr162605 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs215432288
MGI SNP Detail		 ChrX:162741812 Gm38561 within coordinates of
Gm56686 within coordinates of
Rr8437 within coordinates of
Tssr162605 19 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A
rs233845668
MGI SNP Detail		 ChrX:162741862 Gm38561 within coordinates of
Gm56686 within coordinates of
Rr8437 within coordinates of
Tssr162605 69 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A
rs256312739
MGI SNP Detail		 ChrX:162741992 Gm38561 within coordinates of
Gm56686 within coordinates of
Rr8437 within coordinates of
Tssr162605 199 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G
rs222220391
MGI SNP Detail		 ChrX:162742089 Gm38561 within coordinates of
Gm56686 within coordinates of
Rr8437 within coordinates of
Tssr162605 296 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244297640
MGI SNP Detail		 ChrX:162742090 Gm38561 within coordinates of
Gm56686 within coordinates of
Rr8437 within coordinates of
Tssr162605 297 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263012418
MGI SNP Detail		 ChrX:162742111 Gm38561 within coordinates of
Gm56686 within coordinates of
Rr8437 within coordinates of
Tssr162605 318 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs220894066
MGI SNP Detail		 ChrX:162742196 Gm38561 within coordinates of
Gm56686 within coordinates of
Rr8437 within coordinates of
Tssr162605 403 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C
rs241190280
MGI SNP Detail		 ChrX:162742379 Gm38561 within coordinates of
Gm56686 within coordinates of
Rr8437 within coordinates of
Tssr162605 586 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs260613003
MGI SNP Detail		 ChrX:162742519 Gm38561 within coordinates of
Gm56686 within coordinates of
Rr8437 within coordinates of
Tssr162605 726 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G
rs223404454
MGI SNP Detail		 ChrX:162742568 Gm38561 within coordinates of
Gm56686 within coordinates of
Rr8437 within coordinates of
Tssr162605 775 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs243991608
MGI SNP Detail		 ChrX:162742630 Gm38561 within coordinates of
Gm56686 within coordinates of
Tssr162605 837 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs261764154
MGI SNP Detail		 ChrX:162742739 Gm38561 within coordinates of
Gm56686 within coordinates of
Tssr162605 946 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs582079124
MGI SNP Detail		 ChrX:162742797 Gm38561 within coordinates of
Gm56686 within coordinates of
Tssr162605 1004 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T
rs229845401
MGI SNP Detail		 ChrX:162743037 Gm38561 within coordinates of
Gm56686 within coordinates of
Tssr162605 1244 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs251280656
MGI SNP Detail		 ChrX:162743166 Gm38561 within coordinates of
Gm56686 within coordinates of
Tssr162605 1373 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G
rs257020875
MGI SNP Detail		 ChrX:162743180 Gm38561 within coordinates of
Gm56686 within coordinates of
Tssr162605 1387 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A A A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs227818706
MGI SNP Detail		 ChrX:162743199 Gm38561 within coordinates of
Gm56686 within coordinates of
Tssr162605 1406 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs246905858
MGI SNP Detail		 ChrX:162743272 Gm38561 within coordinates of
Gm56686 within coordinates of
Tssr162605 1479 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs217519010
MGI SNP Detail		 ChrX:162743274 Gm38561 within coordinates of
Gm56686 within coordinates of
Tssr162605 1481 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C C C C C C C C A C C C C C C C C C C C C
rs235011500
MGI SNP Detail		 ChrX:162743298 Gm38561 within coordinates of
Gm56686 within coordinates of
Tssr162605 1505 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs254719149
MGI SNP Detail		 ChrX:162743348 Gm38561 within coordinates of
Gm56686 within coordinates of
Tssr162605 1555 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs213832803
MGI SNP Detail		 ChrX:162743372 Gm38561 within coordinates of
Gm56686 within coordinates of
Tssr162605 1579 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A G A A A A
rs239108056
MGI SNP Detail		 ChrX:162743500 Gm38561 within coordinates of
Gm56686 within coordinates of
Tssr162605 1707 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs253015208
MGI SNP Detail		 ChrX:162743553 Gm38561 within coordinates of
Gm56686 within coordinates of
Tssr162605 1760 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs222087452
MGI SNP Detail		 ChrX:162743601 Gm38561 within coordinates of
Gm56686 within coordinates of
Tssr162605 1808 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs585850784
MGI SNP Detail		 ChrX:162743620 Gm38561 within coordinates of
Gm56686 within coordinates of
Tssr162605 1827 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs578695588
MGI SNP Detail		 ChrX:162743640 Gm38561 within coordinates of
Gm56686 within coordinates of
Tssr162605 1847 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs582362347
MGI SNP Detail		 ChrX:162743656 Gm38561 within coordinates of
Gm56686 within coordinates of
Tssr162605 1863 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235693644
MGI SNP Detail		 ChrX:162743668 Gm38561 within coordinates of
Gm56686 within coordinates of
Tssr162605 1875 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C C C C C C C C A C C C C C C C C C C C C
rs254202478
MGI SNP Detail		 ChrX:162743723 Gm38561 within coordinates of
Gm56686 within coordinates of
Tssr162605 1930 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs223371473
MGI SNP Detail		 ChrX:162743770 Gm38561 within coordinates of
Gm56686 within coordinates of
Tssr162605 1977 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C C C C C C C C A C C C C C C C C C C C C
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Showing SNP(s) 1 - 90 of 90
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory