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Mouse SNP Summary
Symbol
Name
ID 		Tssr162787
transcription start site region 162787
MGI:6090554

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Showing SNP(s) 1 - 66 of 66

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs33344887
MGI SNP Detail		 ChrX:7287424 2010204K13Rik within coordinates of
Rr4604 within coordinates of
Tssr162787 1745 bp downstream
 SNP C/T C C C C C C T C C C T C T T T T
rs33344890
MGI SNP Detail		 ChrX:7287501 2010204K13Rik within coordinates of
Rr4604 within coordinates of
Tssr162787 1668 bp downstream
 SNP A/G A A A A A A A A A G A A G G G
rs225421259
MGI SNP Detail		 ChrX:7287506 2010204K13Rik within coordinates of
Rr4604 within coordinates of
Tssr162787 1663 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs33344893
MGI SNP Detail		 ChrX:7287569 2010204K13Rik within coordinates of
Rr4604 within coordinates of
Tssr162787 1600 bp downstream
 SNP A/T T T T T T T A T T T A T T A A A
rs33345676
MGI SNP Detail		 ChrX:7287642 2010204K13Rik within coordinates of
Rr4604 within coordinates of
Tssr162787 1527 bp downstream
 SNP C/T C C C C C C T C C C C C C C
rs33345679
MGI SNP Detail		 ChrX:7287681 2010204K13Rik within coordinates of
Rr4604 within coordinates of
Tssr162787 1488 bp downstream
 SNP C/T C C C C C C C C T C T T C
rs237526928
MGI SNP Detail		 ChrX:7287686 2010204K13Rik within coordinates of
Rr4604 within coordinates of
Tssr162787 1483 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs254639393
MGI SNP Detail		 ChrX:7287692 2010204K13Rik within coordinates of
Rr4604 within coordinates of
Tssr162787 1477 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs227225618
MGI SNP Detail		 ChrX:7287694 2010204K13Rik within coordinates of
Rr4604 within coordinates of
Tssr162787 1475 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs239568907
MGI SNP Detail		 ChrX:7287730 2010204K13Rik within coordinates of
Rr4604 within coordinates of
Tssr162787 1439 bp downstream
 SNP C/T C T
rs263884734
MGI SNP Detail		 ChrX:7287844 2010204K13Rik within coordinates of
Tssr162787 1325 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33345682
MGI SNP Detail		 ChrX:7287890 2010204K13Rik within coordinates of
Tssr162787 1279 bp downstream
 SNP A/G G G G G G G G G G A G G A G
rs33346455
MGI SNP Detail		 ChrX:7288017 2010204K13Rik within coordinates of
Tssr162787 1152 bp downstream
 SNP A/C C C C C C C C C C A C C A C
rs33346458
MGI SNP Detail		 ChrX:7288088 2010204K13Rik within coordinates of
Tssr162787 1081 bp downstream
 SNP A/T T T T T T T T T T T T T T T A A
rs232153761
MGI SNP Detail		 ChrX:7288126 2010204K13Rik within coordinates of
Tssr162787 1043 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244605593
MGI SNP Detail		 ChrX:7288197 2010204K13Rik within coordinates of
Tssr162787 972 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs212751947
MGI SNP Detail		 ChrX:7288198 2010204K13Rik within coordinates of
Tssr162787 971 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs33346461
MGI SNP Detail		 ChrX:7288229 2010204K13Rik within coordinates of
Tssr162787 940 bp downstream
 SNP C/G C C C C C C G C C C C C C C
rs33347274
MGI SNP Detail		 ChrX:7288266 2010204K13Rik within coordinates of
Tssr162787 903 bp downstream
 SNP A/G G G G G G G G G G A G G A G
rs216840880
MGI SNP Detail		 ChrX:7288267 2010204K13Rik within coordinates of
Tssr162787 902 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233011870
MGI SNP Detail		 ChrX:7288299 2010204K13Rik within coordinates of
Tssr162787 870 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs33347277
MGI SNP Detail		 ChrX:7288309 2010204K13Rik within coordinates of
Tssr162787 860 bp downstream
 SNP C/T T T T T T T C T T T T T T T
rs219945088
MGI SNP Detail		 ChrX:7288326 2010204K13Rik within coordinates of
Tssr162787 843 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs586871906
MGI SNP Detail		 ChrX:7288488 2010204K13Rik within coordinates of
Tssr162787 681 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33347279
MGI SNP Detail		 ChrX:7288536 2010204K13Rik within coordinates of
Tssr162787 633 bp downstream
 SNP C/T T T T T T T C T T T T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs256220747
MGI SNP Detail		 ChrX:7288556 2010204K13Rik within coordinates of
Tssr162787 613 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs220084390
MGI SNP Detail		 ChrX:7288577 2010204K13Rik within coordinates of
Tssr162787 592 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs248009004
MGI SNP Detail		 ChrX:7288661 2010204K13Rik within coordinates of
Rr8724 within coordinates of
Tssr162787 508 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs265835253
MGI SNP Detail		 ChrX:7288728 2010204K13Rik within coordinates of
Rr8724 within coordinates of
Tssr162787 441 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs222799377
MGI SNP Detail		 ChrX:7288949 2010204K13Rik within coordinates of
Cpgi22567 within coordinates of
Rr8724 within coordinates of
Tssr162787 220 bp downstream
 SNP C/G C G
rs240276003
MGI SNP Detail		 ChrX:7289211 2010204K13Rik within coordinates of
Rr4606 within coordinates of
Rr8724 within coordinates of
Tssr162787 31 bp upstream
Tssr162788 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258152741
MGI SNP Detail		 ChrX:7289314 Rr4606 within coordinates of
Rr8724 within coordinates of
Tssr162787 134 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226023385
MGI SNP Detail		 ChrX:7289333 Rr4606 within coordinates of
Rr8724 within coordinates of
Tssr162787 153 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244543399
MGI SNP Detail		 ChrX:7289338 Rr4606 within coordinates of
Rr8724 within coordinates of
Tssr162787 158 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs33347282
MGI SNP Detail		 ChrX:7289343 Rr4606 within coordinates of
Rr8724 within coordinates of
Tssr162787 163 bp upstream
 SNP C/T C C T C C C C C C C C T C C T T
rs33348175
MGI SNP Detail		 ChrX:7289364 Rr4606 within coordinates of
Rr8724 within coordinates of
Tssr162787 184 bp upstream
 SNP A/G G G G G G G G G G A G G A G
rs254330406
MGI SNP Detail		 ChrX:7289372 Rr4606 within coordinates of
Rr8724 within coordinates of
Tssr162787 192 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217234021
MGI SNP Detail		 ChrX:7289412 Rr4606 within coordinates of
Tssr162787 232 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs232953923
MGI SNP Detail		 ChrX:7289480 Rr4606 within coordinates of
Tssr162787 300 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250617904
MGI SNP Detail		 ChrX:7289582 Rr4606 within coordinates of
Tssr162787 402 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs33348178
MGI SNP Detail		 ChrX:7289583 Rr4606 within coordinates of
Tssr162787 403 bp upstream
 SNP C/T T T C T T T T T T C C C C C C
rs231265415
MGI SNP Detail		 ChrX:7289600 Rr4606 within coordinates of
Tssr162787 420 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261454809
MGI SNP Detail		 ChrX:7289638 Tssr162787 458 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs33348181
MGI SNP Detail		 ChrX:7289995 Tssr162787 815 bp upstream
 SNP A/G A A A A A A G A A A A A A A
rs251258892
MGI SNP Detail		 ChrX:7290054 Tssr162787 874 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260268941
MGI SNP Detail		 ChrX:7290078 Tssr162787 898 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33348934
MGI SNP Detail		 ChrX:7290130 Tssr162787 950 bp upstream
 SNP C/T C C C C C C C C C C C T C
rs240213012
MGI SNP Detail		 ChrX:7290203 Tssr162787 1023 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs258077141
MGI SNP Detail		 ChrX:7290224 Tssr162787 1044 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225546822
MGI SNP Detail		 ChrX:7290278 Tssr162787 1098 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs237880705
MGI SNP Detail		 ChrX:7290359 Tssr162787 1179 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264723017
MGI SNP Detail		 ChrX:7290445 Tssr162787 1265 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs234157643
MGI SNP Detail		 ChrX:7290454 Tssr162787 1274 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259622845
MGI SNP Detail		 ChrX:7290542 Tssr162787 1362 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A G A G A A A A A A A G A A A
rs217336116
MGI SNP Detail		 ChrX:7290556 Tssr162787 1376 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G
rs223991077
MGI SNP Detail		 ChrX:7290560 Tssr162787 1380 bp upstream
 SNP A/G G A
rs33348937
MGI SNP Detail		 ChrX:7290603 Tssr162787 1423 bp upstream
 SNP G/T T T T T T T G T T T T T T T
rs33348939
MGI SNP Detail		 ChrX:7290658 Tssr162787 1478 bp upstream
 SNP G/T T T T T T T G T T T T T T T
rs33341806
MGI SNP Detail		 ChrX:7290758 Tssr162787 1578 bp upstream
 SNP A/T T T T T T T A T T A T T A T
rs249314958
MGI SNP Detail		 ChrX:7290974 Tssr162787 1794 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212030775
MGI SNP Detail		 ChrX:7290975 Tssr162787 1795 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs237775234
MGI SNP Detail		 ChrX:7291012 Tssr162787 1832 bp upstream
 SNP A/G G A
rs263715768
MGI SNP Detail		 ChrX:7291040 Tssr162787 1860 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221843514
MGI SNP Detail		 ChrX:7291061 DXImx8 within coordinates of
Tssr162787 1881 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233409935
MGI SNP Detail		 ChrX:7291062 DXImx8 within coordinates of
Tssr162787 1882 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs260343483
MGI SNP Detail		 ChrX:7291110 DXImx8 within coordinates of
Tssr162787 1930 bp upstream
 SNP A/G G A
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Showing SNP(s) 1 - 66 of 66
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory
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