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Mouse SNP Summary
Symbol
Name
ID 		Tssr163067
transcription start site region 163067
MGI:6090834

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Showing SNP(s) 1 - 41 of 41

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs264156644
MGI SNP Detail		 ChrX:20156011 Slc9a7 within coordinates of
Tssr163067 1956 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224164795
MGI SNP Detail		 ChrX:20156222 Slc9a7 within coordinates of
Tssr163067 1745 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248964912
MGI SNP Detail		 ChrX:20156258 Slc9a7 within coordinates of
Tssr163067 1709 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262196420
MGI SNP Detail		 ChrX:20156286 Slc9a7 within coordinates of
Tssr163067 1681 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G C G C G G G G G G G G G G G G
rs230823666
MGI SNP Detail		 ChrX:20156297 Slc9a7 within coordinates of
Tssr163067 1670 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G T G T G G G G G G G G G G G G
rs236964714
MGI SNP Detail		 ChrX:20156510 Slc9a7 within coordinates of
Tssr163067 1457 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A G A G A A A A A A A G A A A A
rs256514312
MGI SNP Detail		 ChrX:20156523 Slc9a7 within coordinates of
Tssr163067 1444 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs578331204
MGI SNP Detail		 ChrX:20156554 Slc9a7 within coordinates of
Tssr163067 1413 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs228424614
MGI SNP Detail		 ChrX:20156625 Slc9a7 within coordinates of
Tssr163067 1342 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs249031192
MGI SNP Detail		 ChrX:20156717 Slc9a7 within coordinates of
Tssr163067 1250 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs216537902
MGI SNP Detail		 ChrX:20156826 Rr690377 within coordinates of
Slc9a7 within coordinates of
Tssr163067 1141 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs232701602
MGI SNP Detail		 ChrX:20156891 Slc9a7 within coordinates of
Tssr163067 1076 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A C A C A A A A A A A C A A A A
rs255774601
MGI SNP Detail		 ChrX:20156904 Slc9a7 within coordinates of
Tssr163067 1063 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A G A G A A A A A A A A A A A A
rs214832533
MGI SNP Detail		 ChrX:20157146 Slc9a7 within coordinates of
Tssr163067 821 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29646425
MGI SNP Detail		 ChrX:20157286 Slc9a7 within coordinates of
Tssr163067 681 bp downstream
 SNP C/G C C C G
rs387142883
MGI SNP Detail		 ChrX:20157381 Slc9a7 within coordinates of
Tssr163067 586 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs585828054
MGI SNP Detail		 ChrX:20157383 Slc9a7 within coordinates of
Tssr163067 584 bp downstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs248994227
MGI SNP Detail		 ChrX:20157427 Slc9a7 within coordinates of
Tssr163067 540 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs216801062
MGI SNP Detail		 ChrX:20157499 Slc9a7 within coordinates of
Tssr163067 468 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G T G T G G G G G G G G G G G G
rs235369464
MGI SNP Detail		 ChrX:20157556 Cpgi22643 within coordinates of
Slc9a7 within coordinates of
Tssr163067 411 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260772822
MGI SNP Detail		 ChrX:20158054 Cpgi22643 within coordinates of
Rr690378 within coordinates of
Tssr163067 40 bp upstream
Tssr163068 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs224089921
MGI SNP Detail		 ChrX:20158163 Cpgi22643 within coordinates of
Rr690378 within coordinates of
Tssr163067 149 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A A A A A C A C A A A A A A A C A A A
rs246380070
MGI SNP Detail		 ChrX:20158203 Cpgi22643 within coordinates of
Rr690378 within coordinates of
Tssr163067 189 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs262030634
MGI SNP Detail		 ChrX:20158323 Cpgi22643 within coordinates of
Rr690378 within coordinates of
Tssr163067 309 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs220262645
MGI SNP Detail		 ChrX:20158457 Rr690378 within coordinates of
Tssr163067 443 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C T C T C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs583333105
MGI SNP Detail		 ChrX:20158502 Rr690378 within coordinates of
Tssr163067 488 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T C T C T T T T T T T C T T T T
rs256481245
MGI SNP Detail		 ChrX:20158894 Tssr163067 880 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A G A G A A A A A A A A A A A
rs228403126
MGI SNP Detail		 ChrX:20158905 Tssr163067 891 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A
rs242578074
MGI SNP Detail		 ChrX:20158916 Tssr163067 902 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G C G C G G G G G G G C G G G
rs263301518
MGI SNP Detail		 ChrX:20159016 Tssr163067 1002 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G T G T G G G G G G G T G G G G
rs233488571
MGI SNP Detail		 ChrX:20159092 Tssr163067 1078 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T C T C T T T T T T T C T T T T
rs250986135
MGI SNP Detail		 ChrX:20159102 Tssr163067 1088 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G A G A G G G G G G G G G G G G
rs51217987
MGI SNP Detail		 ChrX:20159341 Tssr163067 1327 bp upstream
 SNP A/G A A G
rs45843727
MGI SNP Detail		 ChrX:20159376 Tssr163067 1362 bp upstream
 SNP A/G A A G
rs49671009
MGI SNP Detail		 ChrX:20159462 Tssr163067 1448 bp upstream
 SNP A/C C C A
rs48756175
MGI SNP Detail		 ChrX:20159481 Tssr163067 1467 bp upstream
 SNP A/C C C A
rs48965263
MGI SNP Detail		 ChrX:20159504 Tssr163067 1490 bp upstream
 SNP C/T C C T
rs51123757
MGI SNP Detail		 ChrX:20159527 Tssr163067 1513 bp upstream
 SNP G/T T T G
rs215524244
MGI SNP Detail		 ChrX:20159708 Tssr163067 1694 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240794268
MGI SNP Detail		 ChrX:20159788 Tssr163067 1774 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A G A G A A A A A A A A A A A A
rs583700186
MGI SNP Detail		 ChrX:20159823 Tssr163067 1809 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A G A G A A A A A A A G A A A A
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Showing SNP(s) 1 - 41 of 41
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory