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Mouse SNP Summary
Symbol
Name
ID 		Tssr163253
transcription start site region 163253
MGI:6091020

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Showing SNP(s) 1 - 39 of 39

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29998872
MGI SNP Detail		 ChrX:42515962 Rr8575 within coordinates of
Tenm1 within coordinates of
Tssr163253 1970 bp downstream
 SNP A/G G G G G G G A G A
rs29999885
MGI SNP Detail		 ChrX:42516072 Rr8575 within coordinates of
Tenm1 within coordinates of
Tssr163253 1860 bp downstream
 SNP A/G A A A A A A A A A G A G
rs255456139
MGI SNP Detail		 ChrX:42516138 Rr8575 within coordinates of
Tenm1 within coordinates of
Tssr163253 1794 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223272073
MGI SNP Detail		 ChrX:42516281 Rr8575 within coordinates of
Tenm1 within coordinates of
Tssr163253 1651 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs243231291
MGI SNP Detail		 ChrX:42516314 Rr8575 within coordinates of
Tenm1 within coordinates of
Tssr163253 1618 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259949942
MGI SNP Detail		 ChrX:42516494 Rr8575 within coordinates of
Tenm1 within coordinates of
Tssr163253 1438 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs221171409
MGI SNP Detail		 ChrX:42516541 Rr8575 within coordinates of
Tenm1 within coordinates of
Tssr163253 1391 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs242902155
MGI SNP Detail		 ChrX:42516670 Rr8575 within coordinates of
Tenm1 within coordinates of
Tssr163253 1262 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29999887
MGI SNP Detail		 ChrX:42516773 Rr8575 within coordinates of
Tenm1 within coordinates of
Tssr163253 1159 bp downstream
 SNP C/T T T T T T T T T T T C T T C
rs29999890
MGI SNP Detail		 ChrX:42516833 Rr8575 within coordinates of
Tenm1 within coordinates of
Tssr163253 1099 bp downstream
 SNP C/T T T T T T T T T T T C T T C T
rs29999893
MGI SNP Detail		 ChrX:42517238 Rr8575 within coordinates of
Tenm1 within coordinates of
Tssr163253 694 bp downstream
 SNP C/T T T T T T C C
rs584772434
MGI SNP Detail		 ChrX:42517515 Rr8575 within coordinates of
Tenm1 within coordinates of
Tssr163253 417 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A
rs582429189
MGI SNP Detail		 ChrX:42517565 Rr8575 within coordinates of
Tenm1 within coordinates of
Tssr163253 367 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs584911833
MGI SNP Detail		 ChrX:42517585 Rr8575 within coordinates of
Tenm1 within coordinates of
Tssr163253 347 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs579094493
MGI SNP Detail		 ChrX:42517591 Rr8575 within coordinates of
Tenm1 within coordinates of
Tssr163253 341 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs582235332
MGI SNP Detail		 ChrX:42517630 Rr8575 within coordinates of
Tenm1 within coordinates of
Tssr163253 302 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs262959577
MGI SNP Detail		 ChrX:42517971 Rr8575 within coordinates of
Tenm1 within coordinates of
Tssr163253 25 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs30000825
MGI SNP Detail		 ChrX:42518278 Rr8575 within coordinates of
Tssr163253 332 bp upstream
 SNP A/G G G G G G G G G G G A G G A
rs243521653
MGI SNP Detail		 ChrX:42518290 Rr8575 within coordinates of
Tssr163253 344 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs215597253
MGI SNP Detail		 ChrX:42518291 Rr8575 within coordinates of
Tssr163253 345 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs232672811
MGI SNP Detail		 ChrX:42518322 Rr8575 within coordinates of
Tssr163253 376 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs29993035
MGI SNP Detail		 ChrX:42518343 Rr8575 within coordinates of
Tssr163253 397 bp upstream
 SNP C/T C C C C C C C C C C T C C T
rs216588675
MGI SNP Detail		 ChrX:42518543 Rr8575 within coordinates of
Tssr163253 597 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs235344169
MGI SNP Detail		 ChrX:42518552 Rr8575 within coordinates of
Tssr163253 606 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs585823134
MGI SNP Detail		 ChrX:42518636 Rr8575 within coordinates of
Tssr163253 690 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs579453773
MGI SNP Detail		 ChrX:42518820 Rr394981 within coordinates of
Rr8575 within coordinates of
Tssr163253 874 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C
rs260910185
MGI SNP Detail		 ChrX:42518832 Rr394981 within coordinates of
Rr8575 within coordinates of
Tssr163253 886 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T C T T T T T T T C T T T T
rs223378556
MGI SNP Detail		 ChrX:42518838 Rr394981 within coordinates of
Rr8575 within coordinates of
Tssr163253 892 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G A G G G G G G G A G G G G
rs237980858
MGI SNP Detail		 ChrX:42518892 Rr394981 within coordinates of
Rr8575 within coordinates of
Tssr163253 946 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs29993037
MGI SNP Detail		 ChrX:42518913 Rr394981 within coordinates of
Rr8575 within coordinates of
Tssr163253 967 bp upstream
 SNP C/T T T T T T T T T T C T T C
rs221062004
MGI SNP Detail		 ChrX:42519132 Rr394981 within coordinates of
Rr8575 within coordinates of
Tssr163253 1186 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G
rs242962020
MGI SNP Detail		 ChrX:42519141 Rr394981 within coordinates of
Rr8575 within coordinates of
Tssr163253 1195 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs29993040
MGI SNP Detail		 ChrX:42519235 Rr394981 within coordinates of
Rr8575 within coordinates of
Tssr163253 1289 bp upstream
 SNP A/G G G G G G G G G G G A G G A
rs221476152
MGI SNP Detail		 ChrX:42519317 Rr394981 within coordinates of
Rr8575 within coordinates of
Tssr163253 1371 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs241541803
MGI SNP Detail		 ChrX:42519378 Rr394981 within coordinates of
Rr8575 within coordinates of
Tssr163253 1432 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C
rs265349658
MGI SNP Detail		 ChrX:42519402 Rr394981 within coordinates of
Rr8575 within coordinates of
Tssr163253 1456 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs230502666
MGI SNP Detail		 ChrX:42519719 Rr394981 within coordinates of
Rr8575 within coordinates of
Tssr163253 1773 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs246287963
MGI SNP Detail		 ChrX:42519881 Rr394981 within coordinates of
Rr8575 within coordinates of
Tssr163253 1935 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs257776456
MGI SNP Detail		 ChrX:42519940 Rr394981 within coordinates of
Rr8575 within coordinates of
Tssr163253 1994 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 39 of 39
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory
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