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Mouse SNP Summary
Symbol
Name
ID
Tssr163518
transcription start site region 163518
MGI:6091285

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Showing SNP(s) 1 - 68 of 68

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29043861
MGI SNP Detail
Alliance Variant
ChrX:69386860 Ids mRNA-UTR
Tssr163518 1998 bp downstream
SNP A/G G G G G G G G G G G A G G A G
rs29043860
MGI SNP Detail
Alliance Variant
ChrX:69386901 Ids mRNA-UTR
Tssr163518 1957 bp downstream
SNP C/T C C C C C C T C C C T C C T C
rs29043859
MGI SNP Detail
Alliance Variant
ChrX:69387005 Ids mRNA-UTR
Tssr163518 1853 bp downstream
SNP A/G A A A A A A A A A A G A A G A
rs220505756
MGI SNP Detail
Alliance Variant
ChrX:69387008 Ids mRNA-UTR
Tssr163518 1850 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238166685
MGI SNP Detail
Alliance Variant
ChrX:69387168 Ids mRNA-UTR
Tssr163518 1690 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs249511637
MGI SNP Detail
Alliance Variant
ChrX:69387201 Ids mRNA-UTR
Tssr163518 1657 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218376889
MGI SNP Detail
Alliance Variant
ChrX:69387216 Ids mRNA-UTR
Tssr163518 1642 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs240834861
MGI SNP Detail
Alliance Variant
ChrX:69387242 Ids mRNA-UTR
Tssr163518 1616 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs31687844
MGI SNP Detail
Alliance Variant
ChrX:69387351 Ids mRNA-UTR
Tssr163518 1507 bp downstream
SNP A/G G G G G G G A G G G G G G G G
rs29043858
MGI SNP Detail
Alliance Variant
ChrX:69387469 Ids mRNA-UTR
Tssr163518 1389 bp downstream
SNP A/T T T T T T T T T T T A T T A T
rs248758046
MGI SNP Detail
Alliance Variant
ChrX:69387503 Ids mRNA-UTR
Tssr163518 1355 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs258976416
MGI SNP Detail
Alliance Variant
ChrX:69387506 Ids mRNA-UTR
Tssr163518 1352 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29043857
MGI SNP Detail
Alliance Variant
ChrX:69387585 Ids mRNA-UTR
Tssr163518 1273 bp downstream
SNP C/T T T T T T T T T T T C T T C T
rs245156957
MGI SNP Detail
Alliance Variant
ChrX:69387610 Ids mRNA-UTR
Tssr163518 1248 bp downstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs256990073
MGI SNP Detail
Alliance Variant
ChrX:69388014 Ids mRNA-UTR
Tssr163518 844 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G A G G A G G G G G G G G G A G G G G G G A G G G G G G G G G G G G
rs228249655
MGI SNP Detail
Alliance Variant
ChrX:69388021 Ids mRNA-UTR
Tssr163518 837 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254811626
MGI SNP Detail
Alliance Variant
ChrX:69388056 Ids mRNA-UTR
Tssr163518 802 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218534950
MGI SNP Detail
Alliance Variant
ChrX:69388070 Ids mRNA-UTR
Tssr163518 788 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs581820913
MGI SNP Detail
Alliance Variant
ChrX:69388191 Ids mRNA-UTR
Tssr163518 667 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A G A
rs584414286
MGI SNP Detail
Alliance Variant
ChrX:69388195 Ids mRNA-UTR
Tssr163518 663 bp downstream
SNP A/G A A A A A A A A A A G A A A A A A A G
rs578702483
MGI SNP Detail
Alliance Variant
ChrX:69388199 Ids mRNA-UTR
Tssr163518 659 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A G A
rs582408443
MGI SNP Detail
Alliance Variant
ChrX:69388205 Ids mRNA-UTR
Tssr163518 653 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A G A A
rs580318579
MGI SNP Detail
Alliance Variant
ChrX:69388261 Ids mRNA-UTR
Tssr163518 597 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G
rs31687333
MGI SNP Detail
Alliance Variant
ChrX:69388413 Ids mRNA-UTR
Tssr163518 445 bp downstream
SNP A/T A A A A A T A T
rs29043856
MGI SNP Detail
Alliance Variant
ChrX:69388458 Ids mRNA-UTR
Tssr163518 400 bp downstream
SNP A/G A A A A A A A G A A G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29043855
MGI SNP Detail
Alliance Variant
ChrX:69388473 Ids mRNA-UTR
Tssr163516 within coordinates of
Tssr163518 385 bp downstream
SNP A/G G G G G G G G G G A G G A
rs231702900
MGI SNP Detail
Alliance Variant
ChrX:69388495 Ids mRNA-UTR
Tssr163516 within coordinates of
Tssr163518 363 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs249450145
MGI SNP Detail
Alliance Variant
ChrX:69388515 Ids mRNA-UTR
Tssr163516 within coordinates of
Tssr163518 343 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs29043854
MGI SNP Detail
Alliance Variant
ChrX:69388538 Ids mRNA-UTR
Tssr163518 320 bp downstream
SNP A/G A A A A A A G A G
rs235818625
MGI SNP Detail
Alliance Variant
ChrX:69388567 Ids mRNA-UTR
Tssr163517 within coordinates of
Tssr163518 291 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs260653157
MGI SNP Detail
Alliance Variant
ChrX:69388594 Ids mRNA-UTR
Tssr163517 within coordinates of
Tssr163518 264 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs226109945
MGI SNP Detail
Alliance Variant
ChrX:69388681 Ids mRNA-UTR
Tssr163518 177 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246404948
MGI SNP Detail
Alliance Variant
ChrX:69388767 Ids mRNA-UTR
Tssr163518 91 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259107767
MGI SNP Detail
Alliance Variant
ChrX:69388821 Ids mRNA-UTR
Tssr163518 37 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs29043343
MGI SNP Detail
Alliance Variant
ChrX:69388838 Ids mRNA-UTR
Tssr163518 20 bp downstream
SNP A/G G G G G G G G G A G G A
rs29043342
MGI SNP Detail
Alliance Variant
ChrX:69388849 Ids mRNA-UTR
Tssr163518 9 bp downstream
SNP C/G G G G G C G C
rs256931186
MGI SNP Detail
Alliance Variant
ChrX:69388859 Ids mRNA-UTR
Tssr163518 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29043341
MGI SNP Detail
Alliance Variant
ChrX:69388875 Ids mRNA-UTR
Tssr163518 within coordinates of
SNP A/T A A A A A A A A T A T
rs260229734
MGI SNP Detail
Alliance Variant
ChrX:69389089 Ids mRNA-UTR
Tssr163518 198 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C
rs264062807
MGI SNP Detail
Alliance Variant
ChrX:69389116 Ids mRNA-UTR
Tssr163518 225 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs29043340
MGI SNP Detail
Alliance Variant
ChrX:69389245 Ids mRNA-UTR
Tssr163518 354 bp upstream
SNP C/G C C C G G
rs245599149
MGI SNP Detail
Alliance Variant
ChrX:69389298 Ids mRNA-UTR
Tssr163518 407 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs214803719
MGI SNP Detail
Alliance Variant
ChrX:69389375 Ids mRNA-UTR
Tssr163518 484 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29043339
MGI SNP Detail
Alliance Variant
ChrX:69389671 Ids mRNA-UTR
Tssr163518 780 bp upstream
SNP G/T T T T T T G T T G T T G
rs243345588
MGI SNP Detail
Alliance Variant
ChrX:69389710 Ids mRNA-UTR
Tssr163518 819 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs212949008
MGI SNP Detail
Alliance Variant
ChrX:69389726 Ids mRNA-UTR
Tssr163518 835 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234449648
MGI SNP Detail
Alliance Variant
ChrX:69389764 Ids mRNA-UTR
Tssr163518 873 bp upstream
Tssr163519 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs29043338
MGI SNP Detail
Alliance Variant
ChrX:69389885 Ids Coding-Synonymous
Tssr163518 994 bp upstream
SNP A/G G G G G G G G G A G G A
rs225428951
MGI SNP Detail
Alliance Variant
ChrX:69389969 Ids Coding-Synonymous
Tssr163518 1078 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs234501937
MGI SNP Detail
Alliance Variant
ChrX:69390212 Ids Coding-Synonymous
Tssr163518 1321 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29043337
MGI SNP Detail
Alliance Variant
ChrX:69390236 Ids Coding-Synonymous
Tssr163518 1345 bp upstream
SNP A/G G G G G G G G G G A G G A
rs220290046
MGI SNP Detail
Alliance Variant
ChrX:69390294 Ids Intron
Tssr163518 1403 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs238694443
MGI SNP Detail
Alliance Variant
ChrX:69390299 Ids Intron
Tssr163518 1408 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29043336
MGI SNP Detail
Alliance Variant
ChrX:69390373 Ids Intron
Tssr163518 1482 bp upstream
SNP C/T T T T T T C T C
rs220273449
MGI SNP Detail
Alliance Variant
ChrX:69390430 Ids Intron
Tssr163518 1539 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248506663
MGI SNP Detail
Alliance Variant
ChrX:69390549 Ids Intron
Tssr163518 1658 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs265982761
MGI SNP Detail
Alliance Variant
ChrX:69390567 Ids Intron
Tssr163518 1676 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs232429579
MGI SNP Detail
Alliance Variant
ChrX:69390580 Ids Intron
Tssr163518 1689 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs239339833
MGI SNP Detail
Alliance Variant
ChrX:69390593 Ids Intron
Tssr163518 1702 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs256704411
MGI SNP Detail
Alliance Variant
ChrX:69390648 Ids Intron
Tssr163518 1757 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs225724782
MGI SNP Detail
Alliance Variant
ChrX:69390658 Ids Intron
Tssr163518 1767 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs243288075
MGI SNP Detail
Alliance Variant
ChrX:69390727 Ids Intron
Tssr163518 1836 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs212305128
MGI SNP Detail
Alliance Variant
ChrX:69390728 Ids Intron
Tssr163518 1837 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs235659464
MGI SNP Detail
Alliance Variant
ChrX:69390754 Ids Intron
Tssr163518 1863 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs254489422
MGI SNP Detail
Alliance Variant
ChrX:69390755 Ids Intron
Tssr163518 1864 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs217863399
MGI SNP Detail
Alliance Variant
ChrX:69390773 Ids Intron
Tssr163518 1882 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234436231
MGI SNP Detail
Alliance Variant
ChrX:69390834 Ids Intron
Tssr163518 1943 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs252521340
MGI SNP Detail
Alliance Variant
ChrX:69390869 Ids Intron
Tssr163518 1978 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
<< first < prev1 next > last >>
Showing SNP(s) 1 - 68 of 68

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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory