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Mouse SNP Summary
Symbol
Name
ID 		Tssr163654
transcription start site region 163654
MGI:6091421

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Showing SNP(s) 1 - 58 of 58

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs231800610
MGI SNP Detail		 ChrX:74155351 Mpp1 within coordinates of
Tssr163654 1897 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251129358
MGI SNP Detail		 ChrX:74155434 Mpp1 within coordinates of
Tssr163654 1814 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs214651619
MGI SNP Detail		 ChrX:74155714 Mpp1 within coordinates of
Tssr163654 1534 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235747840
MGI SNP Detail		 ChrX:74155902 Mpp1 within coordinates of
Tssr163654 1346 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A
rs29035103
MGI SNP Detail		 ChrX:74156158 Mpp1 within coordinates of
Tssr163654 1090 bp downstream
 SNP A/G A A A A G A A A G A A
rs31664120
MGI SNP Detail		 ChrX:74156252 Mpp1 within coordinates of
Tssr163654 996 bp downstream
 SNP A/G A G A G A A A
rs31664119
MGI SNP Detail		 ChrX:74156288 Mpp1 within coordinates of
Tssr163654 960 bp downstream
 SNP A/C C C C C C A C C C C C C
rs234630941
MGI SNP Detail		 ChrX:74156492 Mpp1 within coordinates of
Tssr163654 756 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs252141256
MGI SNP Detail		 ChrX:74156519 Mpp1 within coordinates of
Tssr163654 729 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31664118
MGI SNP Detail		 ChrX:74156541 Mpp1 within coordinates of
Tssr163654 707 bp downstream
 SNP A/C A A A A A A C A A A A A
rs246967838
MGI SNP Detail		 ChrX:74156628 Mpp1 within coordinates of
Tssr163654 620 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs257117460
MGI SNP Detail		 ChrX:74156706 Mpp1 within coordinates of
Tssr163654 542 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs222114146
MGI SNP Detail		 ChrX:74156714 Mpp1 within coordinates of
Tssr163654 534 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242195062
MGI SNP Detail		 ChrX:74156732 Mpp1 within coordinates of
Tssr163654 516 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs585596414
MGI SNP Detail		 ChrX:74156877 Mpp1 within coordinates of
Tssr163654 371 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs255988768
MGI SNP Detail		 ChrX:74156911 Mpp1 within coordinates of
Tssr163654 337 bp downstream
 SNP A/C A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A C A A A
rs579703349
MGI SNP Detail		 ChrX:74156946 Mpp1 within coordinates of
Tssr163654 302 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T
rs229152167
MGI SNP Detail		 ChrX:74157005 Mpp1 within coordinates of
Tssr163654 243 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G C G G G
rs241881253
MGI SNP Detail		 ChrX:74157017 Mpp1 within coordinates of
Tssr163654 231 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs259690420
MGI SNP Detail		 ChrX:74157078 Mpp1 within coordinates of
Tssr163654 170 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T C T T C T T T C T T T T T T T T T T C T T T T T T T C T T C
rs231413340
MGI SNP Detail		 ChrX:74157152 Mpp1 within coordinates of
Tssr163654 96 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs582994182
MGI SNP Detail		 ChrX:74157175 Mpp1 within coordinates of
Tssr163654 73 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs31664117
MGI SNP Detail		 ChrX:74157205 Mpp1 within coordinates of
Tssr163654 43 bp downstream
 SNP C/T C C C C C C T C C C C C
rs213387070
MGI SNP Detail		 ChrX:74157206 Mpp1 within coordinates of
Tssr163654 42 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs586549660
MGI SNP Detail		 ChrX:74157220 Mpp1 within coordinates of
Tssr163654 28 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A C A A A A A A C A A A A A A A A A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs228832474
MGI SNP Detail		 ChrX:74157223 Mpp1 within coordinates of
Tssr163654 25 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G C G G G G
rs579723939
MGI SNP Detail		 ChrX:74157229 Mpp1 within coordinates of
Tssr163654 19 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G G
rs242706544
MGI SNP Detail		 ChrX:74157236 Mpp1 within coordinates of
Tssr163654 12 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs217587135
MGI SNP Detail		 ChrX:74157322 Mpp1 within coordinates of
Tssr163654 56 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs234645689
MGI SNP Detail		 ChrX:74157379 Mpp1 within coordinates of
Tssr163654 113 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29035102
MGI SNP Detail		 ChrX:74157453 Mpp1 within coordinates of
Tssr163654 187 bp upstream
 SNP C/T T T T T T T C T T T T T T
rs216402028
MGI SNP Detail		 ChrX:74157560 Mpp1 within coordinates of
Tssr163654 294 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237144246
MGI SNP Detail		 ChrX:74157641 Mpp1 within coordinates of
Tssr163654 375 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29035101
MGI SNP Detail		 ChrX:74157748 Mpp1 within coordinates of
Tssr163654 482 bp upstream
 SNP A/T T T T T T T A T T T T T T
rs221710660
MGI SNP Detail		 ChrX:74157818 Mpp1 within coordinates of
Tssr163654 552 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229943606
MGI SNP Detail		 ChrX:74157841 Mpp1 within coordinates of
Tssr163654 575 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs249634384
MGI SNP Detail		 ChrX:74157953 Mpp1 within coordinates of
Tssr163654 687 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223405797
MGI SNP Detail		 ChrX:74157977 Mpp1 within coordinates of
Tssr163654 711 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241892619
MGI SNP Detail		 ChrX:74158026 Mpp1 within coordinates of
Tssr163654 760 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259758663
MGI SNP Detail		 ChrX:74158099 Mpp1 within coordinates of
Tssr163654 833 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs223935748
MGI SNP Detail		 ChrX:74158188 Mpp1 within coordinates of
Tssr163654 922 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs243894164
MGI SNP Detail		 ChrX:74158189 Mpp1 within coordinates of
Tssr163654 923 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265009257
MGI SNP Detail		 ChrX:74158206 Mpp1 within coordinates of
Rr10028 within coordinates of
Tssr163654 940 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs228373012
MGI SNP Detail		 ChrX:74158214 Mpp1 within coordinates of
Rr10028 within coordinates of
Tssr163654 948 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241959189
MGI SNP Detail		 ChrX:74158367 Mpp1 within coordinates of
Rr10028 within coordinates of
Tssr163654 1101 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs260253672
MGI SNP Detail		 ChrX:74158392 Mpp1 within coordinates of
Rr10028 within coordinates of
Tssr163654 1126 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A
rs31664116
MGI SNP Detail		 ChrX:74158447 Mpp1 within coordinates of
Rr10028 within coordinates of
Tssr163654 1181 bp upstream
 SNP C/G G G G G G G C G G G G G
rs31664115
MGI SNP Detail		 ChrX:74158494 Mpp1 within coordinates of
Rr10028 within coordinates of
Tssr163654 1228 bp upstream
 SNP C/T C C C C C C T C C C C C
rs31664114
MGI SNP Detail		 ChrX:74158516 Mpp1 within coordinates of
Rr10028 within coordinates of
Tssr163654 1250 bp upstream
 SNP A/G G G G G G G A G G G G G
rs239292224
MGI SNP Detail		 ChrX:74158538 Mpp1 within coordinates of
Rr10028 within coordinates of
Tssr163654 1272 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs250922511
MGI SNP Detail		 ChrX:74158620 Mpp1 within coordinates of
Rr10028 within coordinates of
Tssr163654 1354 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs213461426
MGI SNP Detail		 ChrX:74158759 Mpp1 within coordinates of
Rr10028 within coordinates of
Tssr163654 1493 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs229952487
MGI SNP Detail		 ChrX:74158770 Mpp1 within coordinates of
Rr10028 within coordinates of
Tssr163654 1504 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs255306013
MGI SNP Detail		 ChrX:74158795 Mpp1 within coordinates of
Rr10028 within coordinates of
Tssr163654 1529 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223458512
MGI SNP Detail		 ChrX:74158867 Mpp1 within coordinates of
Rr10028 within coordinates of
Tssr163654 1601 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs235489759
MGI SNP Detail		 ChrX:74159090 Mpp1 within coordinates of
Rr10028 within coordinates of
Tssr163654 1824 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263327721
MGI SNP Detail		 ChrX:74159107 Mpp1 within coordinates of
Rr10028 within coordinates of
Tssr163654 1841 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs224136311
MGI SNP Detail		 ChrX:74159218 Mpp1 within coordinates of
Rr10028 within coordinates of
Tssr163654 1952 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G G A G G G G G G A G G G G
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Showing SNP(s) 1 - 58 of 58
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory