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Mouse SNP Summary
Symbol
Name
ID
Tssr163799
transcription start site region 163799
MGI:6091566

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Showing SNP(s) 1 - 44 of 44

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29087278
MGI SNP Detail
Alliance Variant
ChrX:94238322 Arhgef9 Intron
Tssr163799 1888 bp downstream
SNP A/C C C C C C C A C C C A C C C
rs253126780
MGI SNP Detail
Alliance Variant
ChrX:94238375 Arhgef9 Intron
Tssr163799 1835 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223845774
MGI SNP Detail
Alliance Variant
ChrX:94238388 Arhgef9 Intron
Tssr163799 1822 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C T C C C C
rs242345575
MGI SNP Detail
Alliance Variant
ChrX:94238409 Arhgef9 Intron
Tssr163799 1801 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265841747
MGI SNP Detail
Alliance Variant
ChrX:94238510 Arhgef9 Intron
Tssr163799 1700 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs228261590
MGI SNP Detail
Alliance Variant
ChrX:94238526 Arhgef9 Intron
Tssr163799 1684 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A G A A A A A A A A A A A A G A A
rs243736270
MGI SNP Detail
Alliance Variant
ChrX:94238607 Arhgef9 Intron
Tssr163799 1603 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262643560
MGI SNP Detail
Alliance Variant
ChrX:94238630 Arhgef9 Intron
Tssr163799 1580 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A
rs225034530
MGI SNP Detail
Alliance Variant
ChrX:94238643 Arhgef9 Intron
Tssr163799 1567 bp downstream
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G
rs6173395
MGI SNP Detail
Alliance Variant
ChrX:94238657 Arhgef9 Intron
Tssr163799 1553 bp downstream
SNP A/G A G
rs215056177
MGI SNP Detail
Alliance Variant
ChrX:94238659 Arhgef9 Intron
Tssr163799 1551 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229230579
MGI SNP Detail
Alliance Variant
ChrX:94238776 Arhgef9 Intron
Tssr163799 1434 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs6186922
MGI SNP Detail
Alliance Variant
ChrX:94238808 Arhgef9 Intron
Tssr163799 1402 bp downstream
SNP A/G G G G G G G G A A G A G A G G A
rs213356105
MGI SNP Detail
Alliance Variant
ChrX:94238921 Arhgef9 Intron
Tssr163799 1289 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G
rs234711753
MGI SNP Detail
Alliance Variant
ChrX:94238935 Arhgef9 Intron
Tssr163799 1275 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262486465
MGI SNP Detail
Alliance Variant
ChrX:94239171 Arhgef9 Intron
Tssr163799 1039 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs29087277
MGI SNP Detail
Alliance Variant
ChrX:94239522 Arhgef9 Intron
Rr692510 within coordinates of
Tssr163799 688 bp downstream
SNP A/G G G G G G G A G G G A G G G
rs234932922
MGI SNP Detail
Alliance Variant
ChrX:94239574 Arhgef9 Intron
Rr692510 within coordinates of
Tssr163799 636 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs253161923
MGI SNP Detail
Alliance Variant
ChrX:94239676 Arhgef9 Intron
Rr692510 within coordinates of
Tssr163799 534 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs586237730
MGI SNP Detail
Alliance Variant
ChrX:94239966 Arhgef9 Intron
Rr395372 within coordinates of
Rr692510 within coordinates of
Tssr163799 244 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs223681686
MGI SNP Detail
Alliance Variant
ChrX:94240372 Arhgef9 mRNA-UTR
Rr395372 within coordinates of
Rr692511 within coordinates of
Tssr163799 72 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs250673758
MGI SNP Detail
Alliance Variant
ChrX:94240512 Arhgef9 mRNA-UTR
Rr395372 within coordinates of
Rr692511 within coordinates of
Tssr163799 212 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs256616453
MGI SNP Detail
Alliance Variant
ChrX:94240584 Arhgef9 mRNA-UTR
Rr395372 within coordinates of
Tssr163799 284 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs579986706
MGI SNP Detail
ChrX:94240884 Tssr163799 584 bp upstream
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs583210246
MGI SNP Detail
ChrX:94240905 Tssr163799 605 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A G A A A A A A A G A A G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs220681354
MGI SNP Detail
ChrX:94240954 Tssr163799 654 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs240845924
MGI SNP Detail
ChrX:94241042 Tssr163799 742 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs265192639
MGI SNP Detail
ChrX:94241104 Tssr163799 804 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs219215046
MGI SNP Detail
ChrX:94241114 Tssr163799 814 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs239766800
MGI SNP Detail
ChrX:94241272 Tssr163799 972 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257111351
MGI SNP Detail
ChrX:94241281 Tssr163799 981 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs229078305
MGI SNP Detail
ChrX:94241355 Tssr163799 1055 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs259212079
MGI SNP Detail
ChrX:94241396 Tssr163799 1096 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T C
rs261952883
MGI SNP Detail
ChrX:94241397 Tssr163799 1097 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs29087276
MGI SNP Detail
ChrX:94241758 Tssr163799 1458 bp upstream
SNP C/T C C C C C C C C C C C T
rs251612283
MGI SNP Detail
ChrX:94241817 Tssr163799 1517 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs213707933
MGI SNP Detail
ChrX:94241847 Tssr163799 1547 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs234974319
MGI SNP Detail
ChrX:94241885 Tssr163799 1585 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C T C C T C
rs246637361
MGI SNP Detail
ChrX:94241888 Tssr163799 1588 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C T C C T C
rs217691096
MGI SNP Detail
ChrX:94241948 Tssr163799 1648 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G
rs239730299
MGI SNP Detail
ChrX:94242054 Tssr163799 1754 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C
rs261707748
MGI SNP Detail
ChrX:94242111 Tssr163799 1811 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs220958448
MGI SNP Detail
ChrX:94242179 Tssr163799 1879 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239419869
MGI SNP Detail
ChrX:94242207 Tssr163799 1907 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
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Showing SNP(s) 1 - 44 of 44

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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory