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Mouse SNP Summary
Symbol
Name
ID 		Tssr163887
transcription start site region 163887
MGI:6091654

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Showing SNP(s) 1 - 34 of 34

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs254398597
MGI SNP Detail		 ChrX:100462074 Tssr163887 1738 bp downstream
Zmym3 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs223328013
MGI SNP Detail		 ChrX:100462240 Tssr163887 1572 bp downstream
Zmym3 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs213871677
MGI SNP Detail		 ChrX:100462666 Tssr163887 1146 bp downstream
Zmym3 within coordinates of
 SNP C/G C G
rs584030727
MGI SNP Detail		 ChrX:100462667 Tssr163887 1145 bp downstream
Zmym3 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs233218417
MGI SNP Detail		 ChrX:100462673 Tssr163887 1139 bp downstream
Zmym3 within coordinates of
 SNP A/C C A
rs251391443
MGI SNP Detail		 ChrX:100463236 Tssr163887 576 bp downstream
Zmym3 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs265046752
MGI SNP Detail		 ChrX:100463735 Cpgi22869 within coordinates of
Rr692836 within coordinates of
Tssr163887 77 bp downstream
Zmym3 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs232334583
MGI SNP Detail		 ChrX:100463880 Cpgi22869 within coordinates of
Rr692836 within coordinates of
Tssr163887 49 bp upstream
Zmym3 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G
rs257189437
MGI SNP Detail		 ChrX:100463988 Rr692836 within coordinates of
Tssr163887 157 bp upstream
Zmym3 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs217388904
MGI SNP Detail		 ChrX:100463993 Rr692836 within coordinates of
Tssr163887 162 bp upstream
Zmym3 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs236416223
MGI SNP Detail		 ChrX:100463997 Rr692836 within coordinates of
Tssr163887 166 bp upstream
Zmym3 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G C G G G
rs248124801
MGI SNP Detail		 ChrX:100464003 Rr692836 within coordinates of
Tssr163887 172 bp upstream
Zmym3 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C A
rs587476771
MGI SNP Detail		 ChrX:100464204 Rr692836 within coordinates of
Tssr163887 373 bp upstream
Zmym3 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C T C C C C C C C C C C C C
rs213047925
MGI SNP Detail		 ChrX:100464222 Rr692836 within coordinates of
Tssr163887 391 bp upstream
Zmym3 within coordinates of
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs236506994
MGI SNP Detail		 ChrX:100464249 Rr692836 within coordinates of
Tssr163887 418 bp upstream
Zmym3 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T
rs258114299
MGI SNP Detail		 ChrX:100464289 Rr692836 within coordinates of
Tssr163887 458 bp upstream
Zmym3 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222425580
MGI SNP Detail		 ChrX:100464413 Rr692836 within coordinates of
Tssr163887 582 bp upstream
Zmym3 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs238983154
MGI SNP Detail		 ChrX:100464452 Rr692836 within coordinates of
Tssr163887 621 bp upstream
Zmym3 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251524132
MGI SNP Detail		 ChrX:100464503 Rr692836 within coordinates of
Tssr163887 672 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223098194
MGI SNP Detail		 ChrX:100464582 Rr692836 within coordinates of
Tssr163887 751 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs240504773
MGI SNP Detail		 ChrX:100464650 Rr692836 within coordinates of
Tssr163887 819 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs254384699
MGI SNP Detail		 ChrX:100464653 Rr692836 within coordinates of
Tssr163887 822 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs220079545
MGI SNP Detail		 ChrX:100464691 Rr692836 within coordinates of
Tssr163887 860 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G
rs246650534
MGI SNP Detail		 ChrX:100464698 Rr692836 within coordinates of
Tssr163887 867 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G
rs262265412
MGI SNP Detail		 ChrX:100464840 Tssr163887 1009 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs232876578
MGI SNP Detail		 ChrX:100464910 Tssr163887 1079 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T
rs29080186
MGI SNP Detail		 ChrX:100464953 Tssr163887 1122 bp upstream
 SNP A/G A A A A A A A A A A A A A A G
rs261242880
MGI SNP Detail		 ChrX:100465038 Tssr163887 1207 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228556564
MGI SNP Detail		 ChrX:100465186 Tssr163887 1355 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs248070475
MGI SNP Detail		 ChrX:100465243 Tssr163887 1412 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs212981710
MGI SNP Detail		 ChrX:100465370 Tssr163887 1539 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs234768140
MGI SNP Detail		 ChrX:100465480 Tssr163887 1649 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256463357
MGI SNP Detail		 ChrX:100465528 Tssr163887 1697 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs214031968
MGI SNP Detail		 ChrX:100465788 Tssr163887 1957 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
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Showing SNP(s) 1 - 34 of 34
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory