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Mouse SNP Summary
Symbol
Name
ID
Tssr163921
transcription start site region 163921
MGI:6091688

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Showing SNP(s) 1 - 62 of 62

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs232940726
MGI SNP Detail
ChrX:101685795 Phka1 within coordinates of
Tssr163921 1997 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs253553477
MGI SNP Detail
ChrX:101685878 Phka1 within coordinates of
Tssr163921 1914 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs261288209
MGI SNP Detail
ChrX:101686044 Phka1 within coordinates of
Tssr163921 1748 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs231132608
MGI SNP Detail
ChrX:101686174 Phka1 within coordinates of
Tssr163921 1618 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A T A A A A A A T A A A A A A A A A A A
rs244989684
MGI SNP Detail
ChrX:101686191 Phka1 within coordinates of
Tssr163921 1601 bp downstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs215747596
MGI SNP Detail
ChrX:101686289 Phka1 within coordinates of
Tssr163921 1503 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A G A A A A A A G A A A A A A A A A
rs233786107
MGI SNP Detail
ChrX:101686292 Phka1 within coordinates of
Tssr163921 1500 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A G A A A A A A G A A A A A G A A A A
rs578423144
MGI SNP Detail
ChrX:101686294 Phka1 within coordinates of
Tssr163921 1498 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs581903208
MGI SNP Detail
ChrX:101686308 Phka1 within coordinates of
Tssr163921 1484 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs246630966
MGI SNP Detail
ChrX:101686418 Phka1 within coordinates of
Tssr163921 1374 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs219287386
MGI SNP Detail
ChrX:101686420 Phka1 within coordinates of
Tssr163921 1372 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs239694797
MGI SNP Detail
ChrX:101686518 Phka1 within coordinates of
Tssr163921 1274 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261607038
MGI SNP Detail
ChrX:101686842 Phka1 within coordinates of
Tssr163921 950 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220556508
MGI SNP Detail
ChrX:101686868 Phka1 within coordinates of
Tssr163921 924 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs585825848
MGI SNP Detail
ChrX:101686918 Phka1 within coordinates of
Tssr163921 874 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs232432530
MGI SNP Detail
ChrX:101687115 Phka1 within coordinates of
Tssr163921 677 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs250081914
MGI SNP Detail
ChrX:101687229 Phka1 within coordinates of
Tssr163921 563 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs221599768
MGI SNP Detail
ChrX:101687290 Phka1 within coordinates of
Tssr163921 502 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A G G A A A A G A A A A G A A A A A A G A A A A A A A A A A A
rs579990248
MGI SNP Detail
ChrX:101687300 Phka1 within coordinates of
Tssr163921 492 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs239488543
MGI SNP Detail
ChrX:101687306 Phka1 within coordinates of
Tssr163921 486 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs264573729
MGI SNP Detail
ChrX:101687616 Cpgi22881 within coordinates of
Phka1 within coordinates of
Tssr163921 176 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs225929139
MGI SNP Detail
ChrX:101687709 Cpgi22881 within coordinates of
Phka1 within coordinates of
Tssr163921 83 bp downstream
SNP C/G G G G G G G G G G G G G G G G G G G G C G C C G G G G C G G G G C G G G G G G C G G G G G G G C G G G G
rs241980501
MGI SNP Detail
ChrX:101687720 Cpgi22881 within coordinates of
Phka1 within coordinates of
Tssr163921 72 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs264463999
MGI SNP Detail
ChrX:101687747 Cpgi22881 within coordinates of
Phka1 within coordinates of
Tssr163921 45 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs226256128
MGI SNP Detail
ChrX:101687798 Cpgi22881 within coordinates of
Phka1 within coordinates of
Tssr163921 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T G T G G T T T T G T T T T G T T T T T T G T T T T T T T G T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs244955763
MGI SNP Detail
ChrX:101687913 Cpgi22881 within coordinates of
Tssr163921 103 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A
rs33870556
MGI SNP Detail
ChrX:101687952 Cpgi22881 within coordinates of
Tssr163921 142 bp upstream
SNP A/C C C A
rs227345317
MGI SNP Detail
ChrX:101688023 Tssr163921 213 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs248650179
MGI SNP Detail
ChrX:101688027 Tssr163921 217 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217904414
MGI SNP Detail
ChrX:101688041 Tssr163921 231 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs242297809
MGI SNP Detail
ChrX:101688253 Tssr163921 443 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T
rs250080418
MGI SNP Detail
ChrX:101688266 Tssr163921 456 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs212278094
MGI SNP Detail
ChrX:101688316 Tssr163921 506 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A
rs232218746
MGI SNP Detail
ChrX:101688332 Tssr163921 522 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T
rs249808629
MGI SNP Detail
ChrX:101688350 Tssr163921 540 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs221671419
MGI SNP Detail
ChrX:101688421 Tssr163921 611 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs233234667
MGI SNP Detail
ChrX:101688478 Tssr163921 668 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs264366099
MGI SNP Detail
ChrX:101688631 Tssr163921 821 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T A T A A T T T T A T A T T T A T T T T T T A T T T T T T T A T T T T
rs226084111
MGI SNP Detail
ChrX:101688637 Tssr163921 827 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244704430
MGI SNP Detail
ChrX:101688753 Tssr163921 943 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261346942
MGI SNP Detail
ChrX:101688799 Tssr163921 989 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs219940787
MGI SNP Detail
ChrX:101688816 Tssr163921 1006 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs238518742
MGI SNP Detail
ChrX:101688837 Tssr163921 1027 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs259616352
MGI SNP Detail
ChrX:101689004 Tssr163921 1194 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227315827
MGI SNP Detail
ChrX:101689009 Tssr163921 1199 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs248350203
MGI SNP Detail
ChrX:101689022 Tssr163921 1212 bp upstream
SNP C/G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs265880311
MGI SNP Detail
ChrX:101689074 Tssr163921 1264 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228611232
MGI SNP Detail
ChrX:101689099 Tssr163921 1289 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254374775
MGI SNP Detail
ChrX:101689117 Tssr163921 1307 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs212182655
MGI SNP Detail
ChrX:101689131 Tssr163921 1321 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs226286996
MGI SNP Detail
ChrX:101689139 Tssr163921 1329 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs243898088
MGI SNP Detail
ChrX:101689150 Tssr163921 1340 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs216034870
MGI SNP Detail
ChrX:101689233 Tssr163921 1423 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs233155029
MGI SNP Detail
ChrX:101689274 Tssr163921 1464 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A T A T A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs261181080
MGI SNP Detail
ChrX:101689305 Tssr163921 1495 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T C T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs218414809
MGI SNP Detail
ChrX:101689381 Tssr163921 1571 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs235691528
MGI SNP Detail
ChrX:101689427 Tssr163921 1617 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs261138999
MGI SNP Detail
ChrX:101689529 Tssr163921 1719 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs220038734
MGI SNP Detail
ChrX:101689641 Tssr163921 1831 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238669336
MGI SNP Detail
ChrX:101689745 Tssr163921 1935 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253297350
MGI SNP Detail
ChrX:101689753 Tssr163921 1943 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G
rs220730350
MGI SNP Detail
ChrX:101689798 Tssr163921 1988 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G A G G G G G G G G G G
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Showing SNP(s) 1 - 62 of 62

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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory

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