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Mouse SNP Summary
Symbol
Name
ID
Tssr163956
transcription start site region 163956
MGI:6091723

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Showing SNP(s) 1 - 60 of 60

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs264232548
MGI SNP Detail
ChrX:102524442 Gm26992 within coordinates of
Tsix within coordinates of
Tssr163956 1996 bp downstream
Xist within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs31295127
MGI SNP Detail
ChrX:102524457 Gm26992 within coordinates of
Tsix within coordinates of
Tssr163956 1981 bp downstream
Xist within coordinates of
SNP C/G G G G C
rs225817007
MGI SNP Detail
ChrX:102524528 Gm26992 within coordinates of
Tsix within coordinates of
Tssr163953 within coordinates of
Tssr163956 1910 bp downstream
Xist within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C
rs231078307
MGI SNP Detail
ChrX:102524562 Gm26992 within coordinates of
Gm55587 within coordinates of
Tsix within coordinates of
Tssr163956 1876 bp downstream
Xist within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G
rs248508764
MGI SNP Detail
ChrX:102524619 Gm26992 within coordinates of
Gm55587 within coordinates of
Tsix within coordinates of
Tssr163956 1819 bp downstream
Xist within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs237823648
MGI SNP Detail
ChrX:102524942 Gm26992 within coordinates of
Rr693003 within coordinates of
Tsix within coordinates of
Tssr163956 1496 bp downstream
Xist within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs263459235
MGI SNP Detail
ChrX:102525462 Rr693003 within coordinates of
Tsix within coordinates of
Tssr163956 976 bp downstream
Xist within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs223847590
MGI SNP Detail
ChrX:102525719 Cpgi22887 within coordinates of
Rr693003 within coordinates of
Tsix within coordinates of
Tssr163956 719 bp downstream
Xist within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A A A A A A A T A A A A A A A A A A A A
rs248128807
MGI SNP Detail
ChrX:102525795 Cpgi22887 within coordinates of
Rr693003 within coordinates of
Tsix within coordinates of
Tssr163956 643 bp downstream
Xist within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265848601
MGI SNP Detail
ChrX:102525846 Cpgi22887 within coordinates of
Rr693003 within coordinates of
Tsix within coordinates of
Tssr163956 592 bp downstream
Xist within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs224651647
MGI SNP Detail
ChrX:102525866 Rr693003 within coordinates of
Tsix within coordinates of
Tssr163956 572 bp downstream
Xist within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs237196418
MGI SNP Detail
ChrX:102525981 Rr693003 within coordinates of
Tsix within coordinates of
Tssr163956 457 bp downstream
Xist within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs258285373
MGI SNP Detail
ChrX:102526036 Rr693003 within coordinates of
Tsix within coordinates of
Tssr163956 402 bp downstream
Xist within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A A A A A T A A A A A A A A A A A A
rs225651233
MGI SNP Detail
ChrX:102526288 Tsix within coordinates of
Tssr163956 150 bp downstream
Xist within coordinates of
SNP G/T T T T G T T G T T G G T T T T T T T T T T T T T T G G G G T T T T T T T T T
rs247106345
MGI SNP Detail
ChrX:102526305 Tsix within coordinates of
Tssr161724 within coordinates of
Tssr163956 133 bp downstream
Xist within coordinates of
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs216925851
MGI SNP Detail
ChrX:102526408 Tsix within coordinates of
Tssr163956 30 bp downstream
Xist within coordinates of
SNP G/T T T T G T T T T G T T T T T T T T T T G T G G T T T T T G T T T T T T T T T T G T G T T G T T G G
rs232393617
MGI SNP Detail
ChrX:102526425 Tsix within coordinates of
Tssr163956 13 bp downstream
Xist within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs13468348
MGI SNP Detail
ChrX:102526501 Tsix within coordinates of
Tssr163956 46 bp upstream
Xist within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs218239322
MGI SNP Detail
ChrX:102526597 Tsix within coordinates of
Tssr163956 142 bp upstream
Xist within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs230767519
MGI SNP Detail
ChrX:102526619 Tsix within coordinates of
Tssr163956 164 bp upstream
Xist within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248544206
MGI SNP Detail
ChrX:102526912 Rr693006 within coordinates of
Tsix within coordinates of
Tssr163956 457 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T T T T T T T G T T T T T T T G T T T
rs214734508
MGI SNP Detail
ChrX:102527025 Tsix within coordinates of
Tssr163956 570 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231666980
MGI SNP Detail
ChrX:102527100 Tsix within coordinates of
Tssr163956 645 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263540258
MGI SNP Detail
ChrX:102527114 Tsix within coordinates of
Tssr163956 659 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224451816
MGI SNP Detail
ChrX:102527140 Tsix within coordinates of
Tssr163956 685 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs586651251
MGI SNP Detail
ChrX:102527168 Tsix within coordinates of
Tssr163956 713 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250988557
MGI SNP Detail
ChrX:102527278 Tsix within coordinates of
Tssr163956 823 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260015040
MGI SNP Detail
ChrX:102527288 Tsix within coordinates of
Tssr163956 833 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs218592525
MGI SNP Detail
ChrX:102527291 Tsix within coordinates of
Tssr163956 836 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs236832069
MGI SNP Detail
ChrX:102527293 Tsix within coordinates of
Tssr163956 838 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs258316696
MGI SNP Detail
ChrX:102527334 Tsix within coordinates of
Tssr163956 879 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225689541
MGI SNP Detail
ChrX:102527374 Tsix within coordinates of
Tssr163956 919 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs246385810
MGI SNP Detail
ChrX:102527376 Tsix within coordinates of
Tssr163956 921 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs265480046
MGI SNP Detail
ChrX:102527382 Tsix within coordinates of
Tssr163956 927 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233723261
MGI SNP Detail
ChrX:102527464 Tsix within coordinates of
Tssr163956 1009 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs260397696
MGI SNP Detail
ChrX:102527485 Tsix within coordinates of
Tssr163956 1030 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs216801286
MGI SNP Detail
ChrX:102527488 Tsix within coordinates of
Tssr163956 1033 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C C C C A C C C C C C C A C C C C
rs224481817
MGI SNP Detail
ChrX:102527634 Tsix within coordinates of
Tssr163956 1179 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs242337711
MGI SNP Detail
ChrX:102527641 Tsix within coordinates of
Tssr163956 1186 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs214475958
MGI SNP Detail
ChrX:102527705 Tsix within coordinates of
Tssr163956 1250 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231789334
MGI SNP Detail
ChrX:102527796 Rr693007 within coordinates of
Tsix within coordinates of
Tssr163956 1341 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs259820578
MGI SNP Detail
ChrX:102527878 Rr693007 within coordinates of
Tsix within coordinates of
Tssr163956 1423 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs580076933
MGI SNP Detail
ChrX:102528005 Rr693007 within coordinates of
Tsix within coordinates of
Tssr163956 1550 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs583678538
MGI SNP Detail
ChrX:102528006 Rr693007 within coordinates of
Tsix within coordinates of
Tssr163956 1551 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs587382643
MGI SNP Detail
ChrX:102528020 Rr693007 within coordinates of
Tsix within coordinates of
Tssr163956 1565 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs581537551
MGI SNP Detail
ChrX:102528021 Rr693007 within coordinates of
Tsix within coordinates of
Tssr163956 1566 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs585265268
MGI SNP Detail
ChrX:102528073 Rr693007 within coordinates of
Tsix within coordinates of
Tssr163956 1618 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs586628180
MGI SNP Detail
ChrX:102528074 Rr693007 within coordinates of
Tsix within coordinates of
Tssr163956 1619 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A
rs216550020
MGI SNP Detail
ChrX:102528104 Tsix within coordinates of
Tssr163956 1649 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C
rs240569058
MGI SNP Detail
ChrX:102528122 Tsix within coordinates of
Tssr163956 1667 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs263662691
MGI SNP Detail
ChrX:102528137 Tsix within coordinates of
Tssr163956 1682 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218625543
MGI SNP Detail
ChrX:102528139 Tsix within coordinates of
Tssr163956 1684 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236870698
MGI SNP Detail
ChrX:102528245 Tsix within coordinates of
Tssr163956 1790 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251724242
MGI SNP Detail
ChrX:102528272 Tsix within coordinates of
Tssr163956 1817 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs219278077
MGI SNP Detail
ChrX:102528281 Tsix within coordinates of
Tssr163956 1826 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs248965018
MGI SNP Detail
ChrX:102528282 Tsix within coordinates of
Tssr163956 1827 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263151619
MGI SNP Detail
ChrX:102528301 Tsix within coordinates of
Tssr163956 1846 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs227014130
MGI SNP Detail
ChrX:102528310 Tsix within coordinates of
Tssr163956 1855 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs247241313
MGI SNP Detail
ChrX:102528342 Tsix within coordinates of
Tssr163956 1887 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs259231295
MGI SNP Detail
ChrX:102528347 Tsix within coordinates of
Tssr163956 1892 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
<< first < prev1 next > last >>
Showing SNP(s) 1 - 60 of 60

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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory

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