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Mouse SNP Summary
Symbol
Name
ID 		Tssr163979
transcription start site region 163979
MGI:6091746

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Showing SNP(s) 1 - 52 of 52

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs264297089
MGI SNP Detail		 ChrX:103242787 Nexmif within coordinates of
Tssr163979 1997 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G A A A G G G G G G G G G G G G A G
rs225841659
MGI SNP Detail		 ChrX:103242825 Nexmif within coordinates of
Tssr163979 1959 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs245097616
MGI SNP Detail		 ChrX:103242997 Nexmif within coordinates of
Tssr163979 1787 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G A A G G G G A G G G G A G G A A A G A G G G G G G G A G G A
rs261746570
MGI SNP Detail		 ChrX:103243172 Nexmif within coordinates of
Tssr163979 1612 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs231596790
MGI SNP Detail		 ChrX:103243217 Cpgi22895 within coordinates of
Nexmif within coordinates of
Tssr163979 1567 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs239221531
MGI SNP Detail		 ChrX:103243363 Cpgi22895 within coordinates of
Nexmif within coordinates of
Tssr163979 1421 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260191829
MGI SNP Detail		 ChrX:103243412 Cpgi22895 within coordinates of
Nexmif within coordinates of
Tssr163979 1372 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227589832
MGI SNP Detail		 ChrX:103243578 Cpgi22895 within coordinates of
Nexmif within coordinates of
Tssr163979 1206 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T T C C C C C C C C C C C C T
rs248588256
MGI SNP Detail		 ChrX:103243680 Cpgi22895 within coordinates of
Nexmif within coordinates of
Tssr163979 1104 bp downstream
 SNP A/G G G G G G G G G G G G G G G G A G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G
rs217791827
MGI SNP Detail		 ChrX:103243702 Cpgi22895 within coordinates of
Nexmif within coordinates of
Tssr163979 1082 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs228342537
MGI SNP Detail		 ChrX:103243725 Cpgi22895 within coordinates of
Nexmif within coordinates of
Tssr163979 1059 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G C G G G G G G G G G G G G C G
rs251994879
MGI SNP Detail		 ChrX:103243850 Cpgi22895 within coordinates of
Nexmif within coordinates of
Tssr163979 934 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T
rs581297780
MGI SNP Detail		 ChrX:103243926 Cpgi22895 within coordinates of
Nexmif within coordinates of
Tssr163979 858 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs214778739
MGI SNP Detail		 ChrX:103243986 Cpgi22895 within coordinates of
Nexmif within coordinates of
Tssr163979 798 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs231392145
MGI SNP Detail		 ChrX:103244103 Cpgi22895 within coordinates of
Nexmif within coordinates of
Tssr163979 681 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs6332491
MGI SNP Detail		 ChrX:103244167 Cpgi22895 within coordinates of
Nexmif within coordinates of
Tssr163979 617 bp downstream
 SNP C/G C G
rs215075104
MGI SNP Detail		 ChrX:103244182 Cpgi22895 within coordinates of
Nexmif within coordinates of
Tssr163979 602 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs6345360
MGI SNP Detail		 ChrX:103244206 Cpgi22895 within coordinates of
Nexmif within coordinates of
Tssr163979 578 bp downstream
 SNP G/T T G
rs261039670
MGI SNP Detail		 ChrX:103244524 Cpgi22895 within coordinates of
Nexmif within coordinates of
Tssr163979 260 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs226370461
MGI SNP Detail		 ChrX:103244624 Cpgi22895 within coordinates of
Nexmif within coordinates of
Tssr163979 160 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G
rs242317135
MGI SNP Detail		 ChrX:103244718 Cpgi22895 within coordinates of
Nexmif within coordinates of
Tssr163977 within coordinates of
Tssr163979 66 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A
rs260946641
MGI SNP Detail		 ChrX:103244835 Cpgi22895 within coordinates of
Tssr163979 24 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C
rs585126590
MGI SNP Detail		 ChrX:103244856 Cpgi22895 within coordinates of
Tssr163979 45 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T T C C C C C C C C C C C C T
rs220674340
MGI SNP Detail		 ChrX:103245102 Cpgi22895 within coordinates of
Tssr163979 291 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs239287544
MGI SNP Detail		 ChrX:103245689 Tssr163979 878 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs260250008
MGI SNP Detail		 ChrX:103245748 Tssr163979 937 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227661378
MGI SNP Detail		 ChrX:103245756 Tssr163979 945 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251714265
MGI SNP Detail		 ChrX:103245772 Tssr163979 961 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs263924340
MGI SNP Detail		 ChrX:103245800 Tssr163979 989 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228955404
MGI SNP Detail		 ChrX:103245824 Tssr163979 1013 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs248902125
MGI SNP Detail		 ChrX:103245869 Tssr163979 1058 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs214757110
MGI SNP Detail		 ChrX:103245872 Tssr163979 1061 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs224878372
MGI SNP Detail		 ChrX:103245897 Tssr163979 1086 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs245973310
MGI SNP Detail		 ChrX:103245899 Tssr163979 1088 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs215138281
MGI SNP Detail		 ChrX:103245997 Tssr163979 1186 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235099949
MGI SNP Detail		 ChrX:103246039 Tssr163979 1228 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs263685255
MGI SNP Detail		 ChrX:103246068 Tssr163979 1257 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C
rs218335409
MGI SNP Detail		 ChrX:103246115 Tssr163979 1304 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C G G C C C C G C G C C C G C C G G G C G C C C C C C C G C C G C
rs237404314
MGI SNP Detail		 ChrX:103246179 Tssr163979 1368 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs255617500
MGI SNP Detail		 ChrX:103246301 Tssr163979 1490 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs220354475
MGI SNP Detail		 ChrX:103246421 Tssr163979 1610 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs231794829
MGI SNP Detail		 ChrX:103246468 Tssr163979 1657 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253976673
MGI SNP Detail		 ChrX:103246524 Tssr163979 1713 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C T C C C C C C T C C C C C C T C C C C
rs221358516
MGI SNP Detail		 ChrX:103246538 Tssr163979 1727 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G T T T G G G G G G G G G G G T G
rs248686317
MGI SNP Detail		 ChrX:103246700 Tssr163979 1889 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs265995984
MGI SNP Detail		 ChrX:103246725 Tssr163979 1914 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221901149
MGI SNP Detail		 ChrX:103246734 Tssr163979 1923 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C C C C A C C C C C C C A C C C C
rs243744107
MGI SNP Detail		 ChrX:103246742 Tssr163979 1931 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs256005877
MGI SNP Detail		 ChrX:103246746 Tssr163979 1935 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G T T T G G G G G G G G G G G G T G
rs224958939
MGI SNP Detail		 ChrX:103246782 Tssr163979 1971 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs245670396
MGI SNP Detail		 ChrX:103246785 Tssr163979 1974 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C
rs257236629
MGI SNP Detail		 ChrX:103246807 Tssr163979 1996 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
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Showing SNP(s) 1 - 52 of 52
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory