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Mouse SNP Summary
Symbol
Name
ID 		Tssr164020
transcription start site region 164020
MGI:6091787

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Showing SNP(s) 1 - 75 of 75

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs262855282
MGI SNP Detail		 ChrX:105249817 Tssr164020 1876 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs579569413
MGI SNP Detail		 ChrX:105249839 Tssr164020 1854 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs583185400
MGI SNP Detail		 ChrX:105249873 Tssr164020 1820 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230445810
MGI SNP Detail		 ChrX:105250023 Tssr164020 1670 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs247288638
MGI SNP Detail		 ChrX:105250035 Tssr164020 1658 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215264622
MGI SNP Detail		 ChrX:105250151 Tssr164020 1542 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229329414
MGI SNP Detail		 ChrX:105250160 Tssr164020 1533 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs247975608
MGI SNP Detail		 ChrX:105250166 Tssr164020 1527 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs213267629
MGI SNP Detail		 ChrX:105250175 Tssr164020 1518 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs234532677
MGI SNP Detail		 ChrX:105250181 Tssr164020 1512 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262389847
MGI SNP Detail		 ChrX:105250222 Tssr164020 1471 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs29094720
MGI SNP Detail		 ChrX:105250225 Tssr164020 1468 bp downstream
 SNP A/G G A G G
rs233376985
MGI SNP Detail		 ChrX:105250257 Tssr164020 1436 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G
rs250897083
MGI SNP Detail		 ChrX:105250271 Tssr164020 1422 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs579981954
MGI SNP Detail		 ChrX:105250347 Tssr164020 1346 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs222371921
MGI SNP Detail		 ChrX:105250396 Tssr164020 1297 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs583413602
MGI SNP Detail		 ChrX:105250425 Tssr164020 1268 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240562037
MGI SNP Detail		 ChrX:105250650 Taf9b within coordinates of
Tssr164020 1043 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G G A A A G G G G G G G G G G G G G G
rs260538633
MGI SNP Detail		 ChrX:105250691 Taf9b within coordinates of
Tssr164020 1002 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221601871
MGI SNP Detail		 ChrX:105250692 Taf9b within coordinates of
Tssr164020 1001 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29094719
MGI SNP Detail		 ChrX:105250777 Taf9b within coordinates of
Tssr164020 916 bp downstream
 SNP A/G G A G G G
rs29094718
MGI SNP Detail		 ChrX:105250804 Taf9b within coordinates of
Tssr164020 889 bp downstream
 SNP C/T C C C C C C C C T C C C
rs265369031
MGI SNP Detail		 ChrX:105250898 Taf9b within coordinates of
Tssr164020 795 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs29094717
MGI SNP Detail		 ChrX:105250923 Taf9b within coordinates of
Tssr164020 770 bp downstream
 SNP C/T T T T T T C T T T T T
rs241411836
MGI SNP Detail		 ChrX:105251060 Taf9b within coordinates of
Tssr164020 633 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29094716
MGI SNP Detail		 ChrX:105251066 Taf9b within coordinates of
Tssr164020 627 bp downstream
 SNP A/G A A A A G A A A A A
rs29094715
MGI SNP Detail		 ChrX:105251112 Taf9b within coordinates of
Tssr164020 581 bp downstream
 SNP C/T T T T T T C C
rs29094714
MGI SNP Detail		 ChrX:105251224 Taf9b within coordinates of
Tssr164020 469 bp downstream
 SNP A/G G G G G G G G G G A G G G G
rs587248681
MGI SNP Detail		 ChrX:105251256 Taf9b within coordinates of
Tssr164020 437 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs29094503
MGI SNP Detail		 ChrX:105251326 Taf9b within coordinates of
Tssr164020 367 bp downstream
 SNP A/G A A A A A G A A G A G
rs29094502
MGI SNP Detail		 ChrX:105251444 Taf9b within coordinates of
Tssr164020 249 bp downstream
 SNP A/G A A A A A A A A G A A G
rs29094501
MGI SNP Detail		 ChrX:105251476 Taf9b within coordinates of
Tssr164020 217 bp downstream
 SNP A/G G G G G G A G G G G G G
rs29094500
MGI SNP Detail		 ChrX:105251516 Taf9b within coordinates of
Tssr164020 177 bp downstream
 SNP C/T C C C C C T C T
rs29094499
MGI SNP Detail		 ChrX:105251652 Taf9b within coordinates of
Tssr164020 41 bp downstream
 SNP C/G C C C C G C C C C C
rs245047611
MGI SNP Detail		 ChrX:105251754 Taf9b within coordinates of
Tssr164020 39 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs29094498
MGI SNP Detail		 ChrX:105251894 Taf9b within coordinates of
Tssr164020 179 bp upstream
 SNP C/T C C C C T C C C T C T
rs29094497
MGI SNP Detail		 ChrX:105251947 Taf9b within coordinates of
Tssr164020 232 bp upstream
 SNP G/T T G G G
rs29094496
MGI SNP Detail		 ChrX:105251996 Taf9b within coordinates of
Tssr164020 281 bp upstream
 SNP C/T T T T C T C C
rs29094495
MGI SNP Detail		 ChrX:105252118 Taf9b within coordinates of
Tssr164020 403 bp upstream
 SNP A/G A A A A A G A G A G
rs29094494
MGI SNP Detail		 ChrX:105252193 Taf9b within coordinates of
Tssr164020 478 bp upstream
 SNP A/G A A A A A A A A G G A
rs29096893
MGI SNP Detail		 ChrX:105252331 Taf9b within coordinates of
Tssr164020 616 bp upstream
 SNP C/G G G C G G C C
rs219784200
MGI SNP Detail		 ChrX:105252364 Taf9b within coordinates of
Tssr164020 649 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29096892
MGI SNP Detail		 ChrX:105252403 Taf9b within coordinates of
Tssr164020 688 bp upstream
 SNP A/G A G A A A
rs259292269
MGI SNP Detail		 ChrX:105252449 Taf9b within coordinates of
Tssr164020 734 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T T T T T T T A T T T T T A T T T T
rs223632847
MGI SNP Detail		 ChrX:105252470 Taf9b within coordinates of
Tssr164020 755 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G G G G G G G G G G G G G G G G
rs247477990
MGI SNP Detail		 ChrX:105252550 Taf9b within coordinates of
Tssr164020 835 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs264886848
MGI SNP Detail		 ChrX:105252561 Taf9b within coordinates of
Tssr164020 846 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs29096891
MGI SNP Detail		 ChrX:105252583 Taf9b within coordinates of
Tssr164020 868 bp upstream
 SNP A/G A A A G A A A A
rs29096890
MGI SNP Detail		 ChrX:105252596 Taf9b within coordinates of
Tssr164020 881 bp upstream
 SNP A/G G G G A G G G G G G
rs29096889
MGI SNP Detail		 ChrX:105252642 Taf9b within coordinates of
Tssr164020 927 bp upstream
 SNP A/G G G A G A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs227445387
MGI SNP Detail		 ChrX:105252662 Taf9b within coordinates of
Tssr164020 947 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs245189729
MGI SNP Detail		 ChrX:105252668 Taf9b within coordinates of
Tssr164020 953 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217140949
MGI SNP Detail		 ChrX:105252670 Taf9b within coordinates of
Tssr164020 955 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs234084706
MGI SNP Detail		 ChrX:105252697 Taf9b within coordinates of
Tssr164020 982 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs249538760
MGI SNP Detail		 ChrX:105252704 Taf9b within coordinates of
Tssr164020 989 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C T C C C C C C T C C C C C C C C C C C C
rs211745259
MGI SNP Detail		 ChrX:105252705 Taf9b within coordinates of
Tssr164020 990 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236695880
MGI SNP Detail		 ChrX:105252725 Taf9b within coordinates of
Tssr164020 1010 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262660629
MGI SNP Detail		 ChrX:105252749 Taf9b within coordinates of
Tssr164020 1034 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs219921990
MGI SNP Detail		 ChrX:105252870 Taf9b within coordinates of
Tssr164020 1155 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29096888
MGI SNP Detail		 ChrX:105252956 Taf9b within coordinates of
Tssr164020 1241 bp upstream
 SNP A/G A A A G A A A A A A
rs253136665
MGI SNP Detail		 ChrX:105252958 Taf9b within coordinates of
Tssr164020 1243 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223586387
MGI SNP Detail		 ChrX:105253039 Taf9b within coordinates of
Tssr164020 1324 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs29096887
MGI SNP Detail		 ChrX:105253040 Taf9b within coordinates of
Tssr164020 1325 bp upstream
 SNP A/G A A A A G A A A A A
rs29096886
MGI SNP Detail		 ChrX:105253061 Taf9b within coordinates of
Tssr164020 1346 bp upstream
 SNP C/T T T T T T C T T T T T T T
rs29096885
MGI SNP Detail		 ChrX:105253106 Taf9b within coordinates of
Tssr164020 1391 bp upstream
 SNP C/G C C C C G C C C C C C
rs13483927
MGI SNP Detail		 ChrX:105253153 Taf9b within coordinates of
Tssr164020 1438 bp upstream
 SNP A/C C C C A C C A A C A A C C C C C C C C C C A C C C C C C A C C C C
rs29096884
MGI SNP Detail		 ChrX:105253175 Taf9b within coordinates of
Tssr164020 1460 bp upstream
 SNP A/G A A A A A G A A A G A G A
rs227553401
MGI SNP Detail		 ChrX:105253205 Taf9b within coordinates of
Tssr164020 1490 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239053515
MGI SNP Detail		 ChrX:105253223 Taf9b within coordinates of
Tssr164020 1508 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs29096493
MGI SNP Detail		 ChrX:105253286 Taf9b within coordinates of
Tssr164020 1571 bp upstream
 SNP A/T A A A A T A A A T T A
rs228057728
MGI SNP Detail		 ChrX:105253477 Taf9b within coordinates of
Tssr164020 1762 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs253719813
MGI SNP Detail		 ChrX:105253543 Taf9b within coordinates of
Tssr164020 1828 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs29096492
MGI SNP Detail		 ChrX:105253601 Taf9b within coordinates of
Tssr164020 1886 bp upstream
 SNP C/G G G G C G G G G G
rs29096491
MGI SNP Detail		 ChrX:105253658 Taf9b within coordinates of
Tssr164020 1943 bp upstream
 SNP C/T T T T C C
rs250380091
MGI SNP Detail		 ChrX:105253715 Taf9b within coordinates of
Tssr164020 2000 bp upstream
 SNP A/G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G
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Showing SNP(s) 1 - 75 of 75
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory
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