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Mouse SNP Summary
Symbol
Name
ID 		Tssr164154
transcription start site region 164154
MGI:6091921

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Showing SNP(s) 1 - 42 of 42

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs8257380
MGI SNP Detail		 ChrX:133499893 Gla within coordinates of
Tssr164154 1997 bp downstream
 SNP A/G A A A A A A A A A A A A G
rs6369183
MGI SNP Detail		 ChrX:133499919 Gla within coordinates of
Tssr164154 1971 bp downstream
 SNP C/T T T T T T T T C T T T T T C T
rs29269065
MGI SNP Detail		 ChrX:133499948 Gla within coordinates of
Tssr164154 1942 bp downstream
 SNP G/T G G G G G T G G T T T G T T
rs229645002
MGI SNP Detail		 ChrX:133500182 Gla within coordinates of
Tssr164154 1708 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs579784915
MGI SNP Detail		 ChrX:133500198 Gla within coordinates of
Tssr164154 1692 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242806641
MGI SNP Detail		 ChrX:133500523 Gla within coordinates of
Rr8263 within coordinates of
Tssr164154 1367 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C A C C C C
rs217713146
MGI SNP Detail		 ChrX:133500688 Gla within coordinates of
Rr8263 within coordinates of
Tssr164154 1202 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs240042727
MGI SNP Detail		 ChrX:133500897 Gla within coordinates of
Rr8263 within coordinates of
Tssr164154 993 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262784397
MGI SNP Detail		 ChrX:133501015 Gla within coordinates of
Rr8263 within coordinates of
Tssr164150 within coordinates of
Tssr164154 875 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs8257335
MGI SNP Detail		 ChrX:133501039 Gla within coordinates of
Rr8263 within coordinates of
Tssr164150 within coordinates of
Tssr164154 851 bp downstream
 SNP C/T T T T T T T T T T T T C
rs8257334
MGI SNP Detail		 ChrX:133501075 Gla within coordinates of
Rr8263 within coordinates of
Tssr164151 within coordinates of
Tssr164154 815 bp downstream
 SNP A/G A A A A A A A A A A A G
rs8257333
MGI SNP Detail		 ChrX:133501082 Gla within coordinates of
Rr8263 within coordinates of
Tssr164151 within coordinates of
Tssr164154 808 bp downstream
 SNP G/T G G G G G G G G G G G T
rs218172952
MGI SNP Detail		 ChrX:133501090 Gla within coordinates of
Rr8263 within coordinates of
Tssr164154 800 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs238035910
MGI SNP Detail		 ChrX:133501250 Gla within coordinates of
Rr8263 within coordinates of
Tssr164154 640 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs8238301
MGI SNP Detail		 ChrX:133501348 Gla within coordinates of
Rr8263 within coordinates of
Tssr164154 542 bp downstream
 SNP C/G G G G G G G G G G G G G C
rs8257379
MGI SNP Detail		 ChrX:133501665 Gla within coordinates of
Rr8263 within coordinates of
Tssr164154 225 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A G G A
rs8257378
MGI SNP Detail		 ChrX:133501777 Rr406169 within coordinates of
Rr8263 within coordinates of
Tssr164154 113 bp downstream
 SNP G/T G G G G G G G G G G T
rs8251120
MGI SNP Detail		 ChrX:133501843 Cpgi22942 within coordinates of
Rr406169 within coordinates of
Rr8263 within coordinates of
Tssr164154 47 bp downstream
 SNP G/T T T T T T T T G
rs29269064
MGI SNP Detail		 ChrX:133502048 Cpgi22942 within coordinates of
Hnrnph2 within coordinates of
Rr8263 within coordinates of
Tssr164154 144 bp upstream
 SNP C/G G G G G G G G G G G G G C G
rs225585469
MGI SNP Detail		 ChrX:133502185 Cpgi22942 within coordinates of
Hnrnph2 within coordinates of
Rr8263 within coordinates of
Tssr164154 281 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs581689402
MGI SNP Detail		 ChrX:133502190 Cpgi22942 within coordinates of
Hnrnph2 within coordinates of
Rr8263 within coordinates of
Tssr164154 286 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C
rs29268941
MGI SNP Detail		 ChrX:133502411 Hnrnph2 within coordinates of
Rr8263 within coordinates of
Tssr164154 507 bp upstream
 SNP A/T A T A A A A
rs29268940
MGI SNP Detail		 ChrX:133502438 Hnrnph2 within coordinates of
Rr8263 within coordinates of
Tssr164154 534 bp upstream
 SNP G/T T T T T G G T G G G G G
rs29268939
MGI SNP Detail		 ChrX:133502644 Hnrnph2 within coordinates of
Rr8263 within coordinates of
Tssr164154 740 bp upstream
 SNP C/G G G G G G G G G G G G C G
rs29268938
MGI SNP Detail		 ChrX:133502682 Hnrnph2 within coordinates of
Rr8263 within coordinates of
Tssr164154 778 bp upstream
 SNP A/T T T T T T T T T T T T A T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs247058340
MGI SNP Detail		 ChrX:133502757 Hnrnph2 within coordinates of
Rr8263 within coordinates of
Tssr164154 853 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217475501
MGI SNP Detail		 ChrX:133502758 Hnrnph2 within coordinates of
Rr8263 within coordinates of
Tssr164154 854 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29268937
MGI SNP Detail		 ChrX:133502878 Hnrnph2 within coordinates of
Rr8263 within coordinates of
Tssr164154 974 bp upstream
 SNP C/T T T T T T C T T C C C T C C
rs252037562
MGI SNP Detail		 ChrX:133502889 Hnrnph2 within coordinates of
Rr8263 within coordinates of
Tssr164154 985 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216945150
MGI SNP Detail		 ChrX:133502922 Hnrnph2 within coordinates of
Rr8263 within coordinates of
Tssr164154 1018 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231556388
MGI SNP Detail		 ChrX:133502946 Hnrnph2 within coordinates of
Rr8263 within coordinates of
Tssr164154 1042 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A A A A A T A A A A A A A A A A A A
rs251846707
MGI SNP Detail		 ChrX:133502973 Hnrnph2 within coordinates of
Rr8263 within coordinates of
Tssr164154 1069 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs218048787
MGI SNP Detail		 ChrX:133502994 Hnrnph2 within coordinates of
Rr8263 within coordinates of
Tssr164154 1090 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs230540564
MGI SNP Detail		 ChrX:133502997 Hnrnph2 within coordinates of
Rr8263 within coordinates of
Tssr164154 1093 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs584566747
MGI SNP Detail		 ChrX:133503015 Hnrnph2 within coordinates of
Rr8263 within coordinates of
Tssr164154 1111 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs263745155
MGI SNP Detail		 ChrX:133503031 Hnrnph2 within coordinates of
Rr8263 within coordinates of
Tssr164154 1127 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T T T T T T T A T T T T T T T T T T T T
rs226762645
MGI SNP Detail		 ChrX:133503032 Hnrnph2 within coordinates of
Rr8263 within coordinates of
Tssr164154 1128 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T T T T T T T A T T T T T T T T T T T T
rs247931062
MGI SNP Detail		 ChrX:133503074 Hnrnph2 within coordinates of
Rr8263 within coordinates of
Tssr164154 1170 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29268936
MGI SNP Detail		 ChrX:133503089 Hnrnph2 within coordinates of
Rr8263 within coordinates of
Tssr164154 1185 bp upstream
 SNP C/T C C C C C T C C T T T C T
rs219558271
MGI SNP Detail		 ChrX:133503204 Hnrnph2 within coordinates of
Rr8263 within coordinates of
Tssr164154 1300 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs29268935
MGI SNP Detail		 ChrX:133503241 Hnrnph2 within coordinates of
Rr8263 within coordinates of
Tssr164154 1337 bp upstream
 SNP C/T T T T T T T T T T T T C T
rs254113560
MGI SNP Detail		 ChrX:133503378 Hnrnph2 within coordinates of
Rr8263 within coordinates of
Tssr164154 1474 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
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Showing SNP(s) 1 - 42 of 42
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory