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Mouse SNP Summary
Symbol
Name
ID
Tssr164374
transcription start site region 164374
MGI:6092141

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Showing SNP(s) 1 - 52 of 52

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs238656096
MGI SNP Detail
ChrX:149438447 Tro within coordinates of
Tssr164374 1941 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs256778777
MGI SNP Detail
ChrX:149438661 Tro within coordinates of
Tssr164374 1727 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs31272980
MGI SNP Detail
ChrX:149438691 Tro within coordinates of
Tssr164374 1697 bp downstream
SNP C/T C C T T C T
rs237648583
MGI SNP Detail
ChrX:149438714 Tro within coordinates of
Tssr164374 1674 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264114882
MGI SNP Detail
ChrX:149438743 Tro within coordinates of
Tssr164374 1645 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A
rs222950310
MGI SNP Detail
ChrX:149438857 Tro within coordinates of
Tssr164374 1531 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs238378175
MGI SNP Detail
ChrX:149438961 Rr694335 within coordinates of
Tro within coordinates of
Tssr164374 1427 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs249970850
MGI SNP Detail
ChrX:149439076 Rr694335 within coordinates of
Tro within coordinates of
Tssr164374 1312 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs220649266
MGI SNP Detail
ChrX:149439106 Rr694335 within coordinates of
Tro within coordinates of
Tssr164374 1282 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246001753
MGI SNP Detail
ChrX:149439263 Rr694335 within coordinates of
Tro within coordinates of
Tssr164374 1125 bp downstream
SNP A/C C C C C C C C C C C C C C C C A C C A C C C C C C C C C C C C C C C
rs29296631
MGI SNP Detail
ChrX:149439336 Rr694335 within coordinates of
Tro within coordinates of
Tssr164374 1052 bp downstream
SNP A/G A G A G A A G A G A G G G G A
rs232286625
MGI SNP Detail
ChrX:149439351 Rr694335 within coordinates of
Tro within coordinates of
Tssr164374 1037 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248511770
MGI SNP Detail
ChrX:149439417 Tro within coordinates of
Tssr164374 971 bp downstream
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs29296630
MGI SNP Detail
ChrX:149439442 Tro within coordinates of
Tssr164374 946 bp downstream
SNP A/G G G G G G G G G G G A G G A G
rs228217797
MGI SNP Detail
ChrX:149439454 Tro within coordinates of
Tssr164374 934 bp downstream
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs242976095
MGI SNP Detail
ChrX:149439531 Tro within coordinates of
Tssr164374 857 bp downstream
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs253840720
MGI SNP Detail
ChrX:149439934 Tro within coordinates of
Tssr164374 454 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs29296629
MGI SNP Detail
ChrX:149440184 Tro within coordinates of
Tssr164374 204 bp downstream
SNP A/G G A G A G G G G A G A G A A G G G
rs255273037
MGI SNP Detail
ChrX:149440228 Tro within coordinates of
Tssr164374 160 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs216280300
MGI SNP Detail
ChrX:149440479 Rr694336 within coordinates of
Tro within coordinates of
Tssr164374 76 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs31351250
MGI SNP Detail
ChrX:149440494 Rr694336 within coordinates of
Tro within coordinates of
Tssr164374 91 bp upstream
SNP A/G A G
rs248548061
MGI SNP Detail
ChrX:149440595 Rr694336 within coordinates of
Tssr164374 192 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs29296628
MGI SNP Detail
ChrX:149440604 Rr694336 within coordinates of
Tssr164374 201 bp upstream
SNP C/T C T C T C C C T C T C T T T T T C T
rs230953859
MGI SNP Detail
ChrX:149440782 Rr694336 within coordinates of
Tssr164374 379 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs249906431
MGI SNP Detail
ChrX:149440819 Rr694336 within coordinates of
Tssr164374 416 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T C T T T T T T C T T T T T T T C T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs220593924
MGI SNP Detail
ChrX:149440868 Rr694336 within coordinates of
Tssr164374 465 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236558960
MGI SNP Detail
ChrX:149441076 Tssr164374 673 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs263589167
MGI SNP Detail
ChrX:149441137 Tssr164374 734 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224266998
MGI SNP Detail
ChrX:149441160 Tssr164374 757 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs251485456
MGI SNP Detail
ChrX:149441215 Tssr164374 812 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs259159097
MGI SNP Detail
ChrX:149441225 Tssr164374 822 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs218824995
MGI SNP Detail
ChrX:149441231 Tssr164374 828 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs236515625
MGI SNP Detail
ChrX:149441240 Tssr164374 837 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs253787582
MGI SNP Detail
ChrX:149441256 Tssr164374 853 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T C T T T T T T T C T T T T
rs231065264
MGI SNP Detail
ChrX:149441257 Tssr164374 854 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G A G G G G G G G A G G G G
rs29296627
MGI SNP Detail
ChrX:149441495 Tssr164374 1092 bp upstream
SNP C/T C C C C C C T C C C C C C C C
rs265714385
MGI SNP Detail
ChrX:149441547 Tssr164374 1144 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs231327995
MGI SNP Detail
ChrX:149441570 Tssr164374 1167 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs248491939
MGI SNP Detail
ChrX:149441610 Tssr164374 1207 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A G G A A A A
rs216439459
MGI SNP Detail
ChrX:149441704 Tssr164374 1301 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs230399761
MGI SNP Detail
ChrX:149441730 Tssr164374 1327 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs243359410
MGI SNP Detail
ChrX:149441801 Tssr164374 1398 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs215062722
MGI SNP Detail
ChrX:149441835 Tssr164374 1432 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs238488217
MGI SNP Detail
ChrX:149441852 Tssr164374 1449 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259816839
MGI SNP Detail
ChrX:149441873 Tssr164374 1470 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs224685039
MGI SNP Detail
ChrX:149442082 Tssr164374 1679 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs29296626
MGI SNP Detail
ChrX:149442125 Tssr164374 1722 bp upstream
SNP A/G A A A A A A G A A A A A A A A
rs29296625
MGI SNP Detail
ChrX:149442144 Tssr164374 1741 bp upstream
SNP C/T T T T T T T C T T T T T T T T
rs218767125
MGI SNP Detail
ChrX:149442260 Tssr164374 1857 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs236028662
MGI SNP Detail
ChrX:149442360 Tssr164374 1957 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs256553021
MGI SNP Detail
ChrX:149442385 Tssr164374 1982 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G A G G G G G G G G G G G
rs223220147
MGI SNP Detail
ChrX:149442394 Tssr164374 1991 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
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Showing SNP(s) 1 - 52 of 52

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory

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