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Mouse SNP Summary
Symbol
Name
ID 		Tssr164496
transcription start site region 164496
MGI:6092263

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Showing SNP(s) 1 - 66 of 66

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SNP Density Heatmap
ChrX from 160,866,380 bp to 160,870,384 bp
(4,005 bp)
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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs233485563
MGI SNP Detail		 ChrX:160866507 Nhs within coordinates of
Tssr164496 1873 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs253340452
MGI SNP Detail		 ChrX:160866512 Nhs within coordinates of
Tssr164496 1868 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs226140113
MGI SNP Detail		 ChrX:160866524 Nhs within coordinates of
Tssr164496 1856 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs240334101
MGI SNP Detail		 ChrX:160866531 Nhs within coordinates of
Tssr164496 1849 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260777892
MGI SNP Detail		 ChrX:160866560 Nhs within coordinates of
Tssr164496 1820 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs221328301
MGI SNP Detail		 ChrX:160866564 Nhs within coordinates of
Tssr164496 1816 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs237707280
MGI SNP Detail		 ChrX:160866568 Nhs within coordinates of
Tssr164496 1812 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs256539519
MGI SNP Detail		 ChrX:160866601 Nhs within coordinates of
Tssr164496 1779 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220791077
MGI SNP Detail		 ChrX:160866660 Nhs within coordinates of
Tssr164496 1720 bp downstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs579611817
MGI SNP Detail		 ChrX:160866674 Nhs within coordinates of
Tssr164496 1706 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs240088015
MGI SNP Detail		 ChrX:160866683 Nhs within coordinates of
Tssr164496 1697 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G
rs264075023
MGI SNP Detail		 ChrX:160866684 Nhs within coordinates of
Tssr164496 1696 bp downstream
 SNP A/G A A A A A A A A A A A A A G A A A A A A A A A A A A
rs235731024
MGI SNP Detail		 ChrX:160866789 Nhs within coordinates of
Tssr164496 1591 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs29300262
MGI SNP Detail		 ChrX:160866809 Nhs within coordinates of
Tssr164496 1571 bp downstream
 SNP C/T T T T T T T C T T T C T T C T
rs264922688
MGI SNP Detail		 ChrX:160866812 Nhs within coordinates of
Tssr164496 1568 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226055523
MGI SNP Detail		 ChrX:160866851 Nhs within coordinates of
Tssr164496 1529 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs29300261
MGI SNP Detail		 ChrX:160866855 Nhs within coordinates of
Tssr164496 1525 bp downstream
 SNP A/T T T T T T T A T T T T T T
rs29300260
MGI SNP Detail		 ChrX:160866921 Nhs within coordinates of
Tssr164496 1459 bp downstream
 SNP C/T T T T T T C T T T T T
rs233652238
MGI SNP Detail		 ChrX:160866960 Nhs within coordinates of
Tssr164496 1420 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257850579
MGI SNP Detail		 ChrX:160867026 Nhs within coordinates of
Tssr164496 1354 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217590156
MGI SNP Detail		 ChrX:160867108 Nhs within coordinates of
Tssr164496 1272 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242967374
MGI SNP Detail		 ChrX:160867127 Nhs within coordinates of
Tssr164496 1253 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255468382
MGI SNP Detail		 ChrX:160867192 Nhs within coordinates of
Tssr164496 1188 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220879817
MGI SNP Detail		 ChrX:160867267 Nhs within coordinates of
Tssr164496 1113 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs231325741
MGI SNP Detail		 ChrX:160867311 Nhs within coordinates of
Tssr164496 1069 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs582993817
MGI SNP Detail		 ChrX:160867358 Nhs within coordinates of
Tssr164496 1022 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs250401361
MGI SNP Detail		 ChrX:160867432 Nhs within coordinates of
Tssr164496 948 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs220899740
MGI SNP Detail		 ChrX:160867634 Nhs within coordinates of
Tssr164496 746 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs240257503
MGI SNP Detail		 ChrX:160867773 Nhs within coordinates of
Tssr164496 607 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs265942225
MGI SNP Detail		 ChrX:160867817 Nhs within coordinates of
Tssr164496 563 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A
rs226798407
MGI SNP Detail		 ChrX:160868019 Nhs within coordinates of
Tssr164496 361 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244436480
MGI SNP Detail		 ChrX:160868074 Nhs within coordinates of
Tssr164496 306 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs262163799
MGI SNP Detail		 ChrX:160868237 Nhs within coordinates of
Rr694852 within coordinates of
Tssr164496 143 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs226179615
MGI SNP Detail		 ChrX:160868253 Nhs within coordinates of
Rr694852 within coordinates of
Tssr164496 127 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs245952622
MGI SNP Detail		 ChrX:160868293 Nhs within coordinates of
Rr694852 within coordinates of
Tssr164496 87 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259439842
MGI SNP Detail		 ChrX:160868354 Nhs within coordinates of
Tssr164496 26 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs29300259
MGI SNP Detail		 ChrX:160868515 Nhs within coordinates of
Tssr164496 131 bp upstream
 SNP A/C C C C C C A C C C C C
rs252929891
MGI SNP Detail		 ChrX:160868542 Nhs within coordinates of
Tssr164496 158 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs29300258
MGI SNP Detail		 ChrX:160868607 Nhs within coordinates of
Tssr164496 223 bp upstream
 SNP C/T C C C C C T C C C C C
rs233576751
MGI SNP Detail		 ChrX:160868812 Nhs within coordinates of
Rr694853 within coordinates of
Tssr164496 428 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs586050725
MGI SNP Detail		 ChrX:160868936 Nhs within coordinates of
Rr694853 within coordinates of
Tssr164496 552 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29300257
MGI SNP Detail		 ChrX:160869024 Nhs within coordinates of
Rr694853 within coordinates of
Tssr164496 640 bp upstream
 SNP C/T C C C C C T C C C C C C
rs580400385
MGI SNP Detail		 ChrX:160869118 Nhs within coordinates of
Rr694853 within coordinates of
Tssr164496 734 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs212851102
MGI SNP Detail		 ChrX:160869187 Nhs within coordinates of
Rr694853 within coordinates of
Tssr164496 803 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231422743
MGI SNP Detail		 ChrX:160869207 Nhs within coordinates of
Rr694853 within coordinates of
Tssr164496 823 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250366570
MGI SNP Detail		 ChrX:160869240 Nhs within coordinates of
Rr694853 within coordinates of
Tssr164496 856 bp upstream
 SNP A/G/T A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A G A A A A A A G A A A A A A A T A A A A
rs215108279
MGI SNP Detail		 ChrX:160869311 Nhs within coordinates of
Tssr164496 927 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs241266662
MGI SNP Detail		 ChrX:160869314 Nhs within coordinates of
Tssr164496 930 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs29300256
MGI SNP Detail		 ChrX:160869344 Nhs within coordinates of
Tssr164496 960 bp upstream
 SNP A/T A A A A A T A A A A A
rs227215502
MGI SNP Detail		 ChrX:160869367 Nhs within coordinates of
Tssr164496 983 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs241259131
MGI SNP Detail		 ChrX:160869441 Nhs within coordinates of
Tssr164496 1057 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs587225968
MGI SNP Detail		 ChrX:160869513 Nhs within coordinates of
Tssr164496 1129 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A A A A A A A C A A A A A A A A A A A A
rs29300255
MGI SNP Detail		 ChrX:160869517 Nhs within coordinates of
Tssr164496 1133 bp upstream
 SNP C/T C C C C C T C C C C C
rs219885910
MGI SNP Detail		 ChrX:160869546 Nhs within coordinates of
Tssr164496 1162 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T C T T T T T T T C T T T T
rs240139265
MGI SNP Detail		 ChrX:160869550 Nhs within coordinates of
Tssr164496 1166 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29300254
MGI SNP Detail		 ChrX:160869555 Nhs within coordinates of
Tssr164496 1171 bp upstream
 SNP A/G G G G G G A G G G G G
rs228252235
MGI SNP Detail		 ChrX:160869585 Nhs within coordinates of
Tssr164496 1201 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs248602294
MGI SNP Detail		 ChrX:160869678 Nhs within coordinates of
Tssr164496 1294 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs263914741
MGI SNP Detail		 ChrX:160869896 Nhs within coordinates of
Tssr164496 1512 bp upstream
 SNP C/T C C C C C C T T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C
rs234767132
MGI SNP Detail		 ChrX:160869921 Nhs within coordinates of
Tssr164496 1537 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G
rs248840012
MGI SNP Detail		 ChrX:160869989 Nhs within coordinates of
Tssr164496 1605 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs212614465
MGI SNP Detail		 ChrX:160870059 Nhs within coordinates of
Tssr164496 1675 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs225259001
MGI SNP Detail		 ChrX:160870114 Nhs within coordinates of
Tssr164496 1730 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244554768
MGI SNP Detail		 ChrX:160870137 Nhs within coordinates of
Tssr164496 1753 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs29299733
MGI SNP Detail		 ChrX:160870193 Nhs within coordinates of
Tssr164496 1809 bp upstream
 SNP A/T T T T T T A T T T T T
rs238580757
MGI SNP Detail		 ChrX:160870273 Nhs within coordinates of
Rr694854 within coordinates of
Tssr164496 1889 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 66 of 66
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory