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Mouse SNP Summary
Symbol
Name
ID 		Gm49400
predicted gene 49400
MGI:6140194

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Showing SNP(s) 1 - 66 of 66

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MOLF/EiJ
NOD/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs583867678
MGI SNP Detail		 Chr13:61869414 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 1988 bp upstream
Gm9595 within coordinates of
 SNP C/T T T C C T T T T T T T T T T C T T C T T T T C T T C T T C T T T C T C
rs587455745
MGI SNP Detail		 Chr13:61869495 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 1907 bp upstream
Gm9595 within coordinates of
 SNP A/G A A G G A A A A A A A A A A A A G A A A A A A A A A A A A G G
rs581360456
MGI SNP Detail		 Chr13:61869514 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 1888 bp upstream
Gm9595 within coordinates of
 SNP G/T G G T T G G G G G G G G G G G G T G G G G G G G G G G G T T
rs583629141
MGI SNP Detail		 Chr13:61869898 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 1504 bp upstream
Gm9595 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs587097879
MGI SNP Detail		 Chr13:61869909 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 1493 bp upstream
Gm9595 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs581155596
MGI SNP Detail		 Chr13:61869910 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 1492 bp upstream
Gm9595 within coordinates of
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs48599545
MGI SNP Detail		 Chr13:61869947 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 1455 bp upstream
Gm9595 within coordinates of
 SNP A/T A T A A A A A A A A A A A A A
rs46542982
MGI SNP Detail		 Chr13:61869951 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 1451 bp upstream
Gm9595 within coordinates of
 SNP A/T A A A A A A T A A A T A A T A
rs46957990
MGI SNP Detail		 Chr13:61869970 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 1432 bp upstream
Gm9595 within coordinates of
 SNP G/T T T T T T T G T T T T T T T T
rs586383826
MGI SNP Detail		 Chr13:61870006 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 1396 bp upstream
Gm9595 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A G A
rs49728224
MGI SNP Detail		 Chr13:61870017 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 1385 bp upstream
Gm9595 within coordinates of
 SNP A/T A A A T A A T T T
rs50608689
MGI SNP Detail		 Chr13:61870265 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 1137 bp upstream
Gm9595 within coordinates of
 SNP A/C A A A A A A A A A A A C A
rs45827299
MGI SNP Detail		 Chr13:61870599 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 803 bp upstream
Gm9595 within coordinates of
 SNP C/T T C T C T C T T T
rs50596952
MGI SNP Detail		 Chr13:61870611 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 791 bp upstream
Gm9595 within coordinates of
 SNP C/T T C C C C C T C C T T T T T T
rs580713142
MGI SNP Detail		 Chr13:61870689 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 713 bp upstream
Gm9595 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C
rs584887403
MGI SNP Detail		 Chr13:61870949 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 453 bp upstream
Gm9595 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A T A
rs230648007
MGI SNP Detail		 Chr13:61871040 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 362 bp upstream
Gm9595 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs52573530
MGI SNP Detail		 Chr13:61871080 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 322 bp upstream
Gm9595 within coordinates of
 SNP G/T T G T T T T T T T T G G
rs249656961
MGI SNP Detail		 Chr13:61871122 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 280 bp upstream
Gm9595 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs217501954
MGI SNP Detail		 Chr13:61871170 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 232 bp upstream
Gm9595 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T A T
rs235647988
MGI SNP Detail		 Chr13:61871230 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 172 bp upstream
Gm9595 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T C T
rs46091756
MGI SNP Detail		 Chr13:61871309 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 93 bp upstream
Gm9595 within coordinates of
 SNP A/G G G A G A A G A G G G G G G
rs47865097
MGI SNP Detail		 Chr13:61871439 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 within coordinates of
Gm9595 within coordinates of
 SNP G/T G T T T G T T G G G G G
rs48184008
MGI SNP Detail		 Chr13:61871455 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 within coordinates of
Gm9595 within coordinates of
 SNP A/T T A T A A A A T T
rs259636196
MGI SNP Detail		 Chr13:61871456 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 within coordinates of
Gm9595 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C T C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MOLF/EiJ
NOD/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs224038177
MGI SNP Detail		 Chr13:61871561 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 within coordinates of
Gm9595 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A C A
rs51605574
MGI SNP Detail		 Chr13:61871563 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 within coordinates of
Gm9595 within coordinates of
 SNP C/T C C T C T T C T T C C C C C C
rs45743105
MGI SNP Detail		 Chr13:61871580 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 within coordinates of
Gm9595 within coordinates of
 SNP A/G A G A G G G G G A A A A
rs244019278
MGI SNP Detail		 Chr13:61871602 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 within coordinates of
Gm9595 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs261991966
MGI SNP Detail		 Chr13:61871603 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 within coordinates of
Gm9595 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G T G
rs578915375
MGI SNP Detail		 Chr13:61871676 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 within coordinates of
Gm9595 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G
rs582381662
MGI SNP Detail		 Chr13:61871684 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 within coordinates of
Gm9595 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A T A A A A A A A A
rs48277225
MGI SNP Detail		 Chr13:61871726 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 within coordinates of
Gm9595 within coordinates of
 SNP A/T A T A T T A T T A A A
rs46670163
MGI SNP Detail		 Chr13:61871732 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 within coordinates of
Gm9595 within coordinates of
 SNP A/G A A G A G G G G G A A A A A
rs221526818
MGI SNP Detail		 Chr13:61871763 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 within coordinates of
Gm9595 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs49205080
MGI SNP Detail		 Chr13:61871811 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 within coordinates of
Gm9595 within coordinates of
 SNP A/G A A G A G G A G A A A A A
rs51585610
MGI SNP Detail		 Chr13:61871830 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 within coordinates of
Gm9595 within coordinates of
 SNP G/T T T G T G G T G T T T T T T
rs49622631
MGI SNP Detail		 Chr13:61871885 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 within coordinates of
Gm9595 within coordinates of
 SNP A/T T A T A A A A A A T T
rs47392590
MGI SNP Detail		 Chr13:61871892 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 within coordinates of
Gm9595 within coordinates of
 SNP A/G G G A A A G A A G G G G G G
rs585708220
MGI SNP Detail		 Chr13:61871976 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 within coordinates of
Gm9595 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs579649411
MGI SNP Detail		 Chr13:61871993 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 within coordinates of
Gm9595 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T C T
rs51015625
MGI SNP Detail		 Chr13:61872088 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 within coordinates of
Gm9595 within coordinates of
 SNP G/T T T T T T G T T T G T T G T
rs47678827
MGI SNP Detail		 Chr13:61872097 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 within coordinates of
Gm9595 within coordinates of
 SNP A/C C C C C C C C C C C C C C A C
rs581750309
MGI SNP Detail		 Chr13:61872162 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 17 bp downstream
Gm9595 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs49361265
MGI SNP Detail		 Chr13:61872177 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 32 bp downstream
Gm9595 within coordinates of
 SNP G/T T G T G G G G T T
rs47092655
MGI SNP Detail		 Chr13:61872183 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 38 bp downstream
Gm9595 within coordinates of
 SNP A/G G G A G A A G A A G G G G G
rs47338509
MGI SNP Detail		 Chr13:61872421 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 276 bp downstream
Gm9595 within coordinates of
 SNP A/G A A A A A A A A A A A A A G A
rs585995678
MGI SNP Detail		 Chr13:61872442 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 297 bp downstream
Gm9595 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T G T
rs48891312
MGI SNP Detail		 Chr13:61872443 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 298 bp downstream
Gm9595 within coordinates of
 SNP C/T T C C T C C T C C T T T
rs580364408
MGI SNP Detail		 Chr13:61872685 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 540 bp downstream
Gm9595 within coordinates of
 SNP A/C A A A A A A A A A A A C A A A A A A A A A C A A A A A A A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MOLF/EiJ
NOD/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs584001627
MGI SNP Detail		 Chr13:61872693 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 548 bp downstream
Gm9595 within coordinates of
 SNP C/T T T T T T T T T T T T T C T T T T T T T T T C T T T T T T T T T T
rs587421423
MGI SNP Detail		 Chr13:61872716 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 571 bp downstream
Gm9595 within coordinates of
 SNP C/G G G G G G G G G G G G G C G G G G G G G G C G G G G G G G G
rs580158923
MGI SNP Detail		 Chr13:61872738 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 593 bp downstream
Gm9595 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A G A A A A A A A A
rs583337870
MGI SNP Detail		 Chr13:61873350 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 1205 bp downstream
Gm9595 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs50002180
MGI SNP Detail		 Chr13:61873373 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 1228 bp downstream
Gm9595 within coordinates of
 SNP A/C C C A C A C A C C C C C C C
rs46408636
MGI SNP Detail		 Chr13:61873443 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 1298 bp downstream
Gm9595 within coordinates of
 SNP C/G C C G C G C C C C C C C C
rs48339523
MGI SNP Detail		 Chr13:61873475 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 1330 bp downstream
Gm9595 within coordinates of
 SNP C/T T T C C T T T T C C
rs586805768
MGI SNP Detail		 Chr13:61873535 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 1390 bp downstream
Gm9595 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A
rs48788360
MGI SNP Detail		 Chr13:61873657 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 1512 bp downstream
Gm9595 within coordinates of
 SNP A/G G G A A A G G G G G G G A A
rs46226142
MGI SNP Detail		 Chr13:61873672 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 1527 bp downstream
Gm9595 within coordinates of
 SNP A/G A A G G G G A A A G A A G
rs585341173
MGI SNP Detail		 Chr13:61873742 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 1597 bp downstream
Gm9595 within coordinates of
 SNP A/G A A A A A A A A A A A A G A A G A A A A G A A A A G A A A A A
rs48078309
MGI SNP Detail		 Chr13:61873831 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 1686 bp downstream
Gm9595 within coordinates of
 SNP C/T C T T C T C T T C C C C C C
rs579554515
MGI SNP Detail		 Chr13:61873963 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 1818 bp downstream
Gm9595 within coordinates of
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs48877134
MGI SNP Detail		 Chr13:61874003 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 1858 bp downstream
Gm9595 within coordinates of
 SNP A/G A A G A G A A A A A A A A
rs235846683
MGI SNP Detail		 Chr13:61874044 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 1899 bp downstream
Gm9595 within coordinates of
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs586449458
MGI SNP Detail		 Chr13:61874116 1700028E11Rik within coordinates of
Gm49357 within coordinates of
Gm49400 1971 bp downstream
Gm9595 within coordinates of
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G
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Showing SNP(s) 1 - 66 of 66
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory