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Mouse SNP Summary
Symbol
Name
ID 		Gm52709
predicted gene, 52709
MGI:6367061

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Showing SNP(s) 1 - 100 of 198

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
RF/J
RIIIS/J
SEA/GnJ
SM/J
SPRET/EiJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs32009649
MGI SNP Detail
Alliance Variant		 Chr4:150523705 Gm52709 1962 bp downstream
Rere Intron
 SNP C/T C C T C T T C C T T C T C T T C T T
rs32686113
MGI SNP Detail
Alliance Variant		 Chr4:150524063 Gm52709 1604 bp downstream
Rere Intron
 SNP A/G A A A A A A G A A A G A A G A
rs32687076
MGI SNP Detail
Alliance Variant		 Chr4:150524302 Gm52709 1365 bp downstream
Rere Intron
 SNP C/G C C C C C C G C C C C C C C C
rs32687079
MGI SNP Detail
Alliance Variant		 Chr4:150524452 Gm52709 1215 bp downstream
Rere Intron
 SNP C/T T T T T T T C T T T C T T C T
rs32687082
MGI SNP Detail
Alliance Variant		 Chr4:150524466 Gm52709 1201 bp downstream
Rere Intron
 SNP G/T T T T T T T T T T T G T T G T
rs32687655
MGI SNP Detail
Alliance Variant		 Chr4:150524480 Gm52709 1187 bp downstream
Rere Intron
 SNP A/G G G G G G G A G G G G G G G G
rs32687658
MGI SNP Detail
Alliance Variant		 Chr4:150524585 Gm52709 1082 bp downstream
Rere Intron
 SNP A/G G G G G G G G G G G A G G A G
rs32687660
MGI SNP Detail
Alliance Variant		 Chr4:150524795 Gm52709 872 bp downstream
Rere Intron
 SNP C/T T T T T T T C T T T T T T
rs32687663
MGI SNP Detail
Alliance Variant		 Chr4:150524857 Gm52709 810 bp downstream
Rere Intron
 SNP G/T T T T T T T T T T T G T T G T
rs32688505
MGI SNP Detail
Alliance Variant		 Chr4:150524887 Gm52709 780 bp downstream
Rere Intron
 SNP C/T C C C C C C C C C C T C C T C
rs32688508
MGI SNP Detail
Alliance Variant		 Chr4:150524945 Gm52709 722 bp downstream
Rere Intron
 SNP A/C C C C C C C C C C C A C C A C
rs32688511
MGI SNP Detail
Alliance Variant		 Chr4:150525092 Gm52709 575 bp downstream
Rere Intron
 SNP C/T C C C C C C T C C C C C C C C
rs32689204
MGI SNP Detail
Alliance Variant		 Chr4:150525148 Gm52709 519 bp downstream
Rere Intron
 SNP A/G A A A A A A A A A A G A A G A
rs32689207
MGI SNP Detail
Alliance Variant		 Chr4:150525345 Gm52709 322 bp downstream
Rere Intron
 SNP C/T C C C C C C T C C C C C C C C
rs32689210
MGI SNP Detail
Alliance Variant		 Chr4:150525438 Gm52709 229 bp downstream
Rere Intron
 SNP C/T C C C C C C T C C C C C C C C
rs32689212
MGI SNP Detail
Alliance Variant		 Chr4:150525688 Gm52709 within coordinates of
Rere Intron
 SNP C/T C C C C C C C C C C T C C T C
rs32682806
MGI SNP Detail
Alliance Variant		 Chr4:150525917 Gm52709 within coordinates of
Rere Intron
 SNP G/T T T T T T T G T T T G T T G T
rs32682808
MGI SNP Detail
Alliance Variant		 Chr4:150526055 Gm52709 within coordinates of
Rere Intron
 SNP A/C C C C C C C C C C C A C C A C
rs32682811
MGI SNP Detail
Alliance Variant		 Chr4:150526172 Gm52709 within coordinates of
Rere Intron
 SNP C/T T T T T T T T T T T C T T C T
rs32683394
MGI SNP Detail
Alliance Variant		 Chr4:150526401 Gm52709 within coordinates of
Rere Intron
 SNP G/T G G G G G G G G G G T G G T G
rs31938530
MGI SNP Detail
Alliance Variant		 Chr4:150526532 Gm52709 within coordinates of
Rere Intron
 SNP C/T T T T C C
rs32714439
MGI SNP Detail
Alliance Variant		 Chr4:150526590 Gm52709 within coordinates of
Rere Intron
 SNP A/G G G A A
rs32673574
MGI SNP Detail
Alliance Variant		 Chr4:150526890 Gm52709 within coordinates of
Rere Intron
 SNP A/G A A G
rs32683397
MGI SNP Detail
Alliance Variant		 Chr4:150527140 Gm52709 within coordinates of
Rere Intron
 SNP A/G A A A A A A G A A A A A A A
rs31786996
MGI SNP Detail
Alliance Variant		 Chr4:150527306 Gm52709 within coordinates of
Rere Intron
 SNP C/T T T T C T C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
RF/J
RIIIS/J
SEA/GnJ
SM/J
SPRET/EiJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs32683400
MGI SNP Detail
Alliance Variant		 Chr4:150527344 Gm52709 within coordinates of
Rere Intron
 SNP A/G A A A A A A G A A A G A A G A
rs6185357
MGI SNP Detail
Alliance Variant		 Chr4:150527508 Gm52709 within coordinates of
Rere Intron
 SNP G/T G G G T G T T T G G T T T G T T G T
rs32684375
MGI SNP Detail
Alliance Variant		 Chr4:150527777 Gm52709 within coordinates of
Rere Intron
 SNP C/T T T C T C C C C C C C C C C C
rs32684378
MGI SNP Detail
Alliance Variant		 Chr4:150527827 Gm52709 within coordinates of
Rere Intron
 SNP C/T C C C C C C C C C T C C C C C C C
rs32684380
MGI SNP Detail
Alliance Variant		 Chr4:150527886 Gm52709 within coordinates of
Rere Intron
 SNP C/T T T T T T T T T T C T C T
rs32684382
MGI SNP Detail
Alliance Variant		 Chr4:150527941 Gm52709 within coordinates of
Rere Intron
 SNP C/T T T T T T T T T T T C T T C T
rs32685225
MGI SNP Detail
Alliance Variant		 Chr4:150528072 Gm52709 within coordinates of
Rere Intron
 SNP C/T C C C C C T C C C T T C
rs32685228
MGI SNP Detail
Alliance Variant		 Chr4:150528265 Gm52709 within coordinates of
Rere Intron
 SNP A/G G G G G G G A G G G G G G G G
rs32685231
MGI SNP Detail
Alliance Variant		 Chr4:150528682 Gm52709 within coordinates of
Rere Intron
Rr605300 within coordinates of
 SNP A/C A A C A C C A C C C A A C C A C
rs32685233
MGI SNP Detail
Alliance Variant		 Chr4:150528716 Gm52709 within coordinates of
Rere Intron
Rr605300 within coordinates of
 SNP A/G G G G G G G G G G G A G G A G
rs32685925
MGI SNP Detail
Alliance Variant		 Chr4:150528775 Gm52709 within coordinates of
Rere Intron
Rr605300 within coordinates of
 SNP C/T C C C C C C C C C T C C C C
rs32685928
MGI SNP Detail
Alliance Variant		 Chr4:150528804 Gm52709 within coordinates of
Rere Intron
Rr605300 within coordinates of
 SNP C/G G G G G G G G G C G G G G G G G
rs32685930
MGI SNP Detail
Alliance Variant		 Chr4:150528832 Gm52709 within coordinates of
Rere Intron
Rr605300 within coordinates of
 SNP A/G A A A A A A G A A A G A A G A
rs32685933
MGI SNP Detail
Alliance Variant		 Chr4:150529699 Gm52709 within coordinates of
Rere Intron
 SNP C/T C C C C C C C C C C C C T C
rs32686854
MGI SNP Detail
Alliance Variant		 Chr4:150529706 Gm52709 within coordinates of
Rere Intron
 SNP C/T C C T C T C T T C T T C T
rs32686856
MGI SNP Detail
Alliance Variant		 Chr4:150529741 Gm52709 within coordinates of
Rere Intron
 SNP A/G A A A A A G G A A G A G A A G A A
rs52127903
MGI SNP Detail
Alliance Variant		 Chr4:150529954 Gm52709 within coordinates of
Rere Intron
 SNP C/T C T C T
rs32686858
MGI SNP Detail
Alliance Variant		 Chr4:150530086 Gm52709 within coordinates of
Rere Intron
 SNP A/G G G G G G G A G G G A G G A G
rs32686861
MGI SNP Detail
Alliance Variant		 Chr4:150530150 Gm52709 within coordinates of
Rere Intron
Rr377422 within coordinates of
 SNP G/T T T T T T T G T T T G T T G T
rs32031882
MGI SNP Detail
Alliance Variant		 Chr4:150530164 Gm52709 within coordinates of
Rere Intron
Rr377422 within coordinates of
 SNP A/G G G G G G G G A G G A G G G G G
rs32623616
MGI SNP Detail
Alliance Variant		 Chr4:150530337 Gm52709 within coordinates of
Rere Intron
Rr377422 within coordinates of
 SNP C/T T T T T T T T C T T T C T T T T T T T
rs32215634
MGI SNP Detail
Alliance Variant		 Chr4:150530438 Gm52709 within coordinates of
Rere Intron
Rr377422 within coordinates of
 SNP A/G A A A G A G G G A G G G A G G A G
rs32604212
MGI SNP Detail
Alliance Variant		 Chr4:150530605 Gm52709 within coordinates of
Rere Intron
Rr377422 within coordinates of
 SNP A/G A A A A A A A G A A A G A A A A A A A
rs32687900
MGI SNP Detail
Alliance Variant		 Chr4:150530647 Gm52709 within coordinates of
Rere Intron
Rr377422 within coordinates of
 SNP G/T G G G G G G T G G G T G G T G
rs46949666
MGI SNP Detail
Alliance Variant		 Chr4:150530690 Gm52709 within coordinates of
Rere Intron
Rr377422 within coordinates of
 SNP T T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
RF/J
RIIIS/J
SEA/GnJ
SM/J
SPRET/EiJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs48323316
MGI SNP Detail
Alliance Variant		 Chr4:150530754 Gm52709 within coordinates of
Rere Intron
Rr377422 within coordinates of
 SNP G G G
rs32687903
MGI SNP Detail
Alliance Variant		 Chr4:150530807 Gm52709 within coordinates of
Rere Intron
Rr377422 within coordinates of
 SNP A/G A A G A G G A G G A G A G A G G
rs32688666
MGI SNP Detail
Alliance Variant		 Chr4:150530914 Gm52709 within coordinates of
Rere Intron
Rr377422 within coordinates of
 SNP A/T A A A A A A T A A A A A A A A
rs32688668
MGI SNP Detail
Alliance Variant		 Chr4:150531102 Gm52709 within coordinates of
Rere Intron
Rr377422 within coordinates of
 SNP C/G C C C C C C C C C C G C C C C
rs32688671
MGI SNP Detail
Alliance Variant		 Chr4:150531134 Gm52709 within coordinates of
Rere Intron
Rr377422 within coordinates of
Rr605301 within coordinates of
 SNP C/T T T T T T T C T T T C T T C T
rs32238081
MGI SNP Detail
Alliance Variant		 Chr4:150531521 Gm52709 within coordinates of
Rere Intron
Rr377422 within coordinates of
Rr605301 within coordinates of
 SNP C/T C C C T C T T T T T T T T T T T T
rs32181265
MGI SNP Detail
Alliance Variant		 Chr4:150531622 Gm52709 within coordinates of
Rere Intron
Rr377422 within coordinates of
 SNP C/T T T C T C C C C C C C C C C C C
rs32683109
MGI SNP Detail
Alliance Variant		 Chr4:150531647 Gm52709 within coordinates of
Rere Intron
Rr377422 within coordinates of
 SNP A/G A A A A A A A A A A G A A G A
rs32386224
MGI SNP Detail
Alliance Variant		 Chr4:150531904 Gm52709 within coordinates of
Rere Intron
Rr377422 within coordinates of
 SNP A/G A G G
rs32683112
MGI SNP Detail
Alliance Variant		 Chr4:150532048 Gm52709 within coordinates of
Rere Intron
Rr605302 within coordinates of
 SNP C/T C C C C C C C C C C T C C T C
rs32217422
MGI SNP Detail
Alliance Variant		 Chr4:150532077 Gm52709 within coordinates of
Rere Intron
Rr605302 within coordinates of
 SNP A/T T T T A T A A A T A A A T A A T A
rs108682245
MGI SNP Detail
Alliance Variant		 Chr4:150532290 Gm52709 within coordinates of
Rere Intron
Rr605302 within coordinates of
 SNP A/C A A A C
rs32683976
MGI SNP Detail
Alliance Variant		 Chr4:150532330 Gm52709 within coordinates of
Rere Intron
 SNP C/T C C C T C T T C T T C T C C T T C T T
rs32623152
MGI SNP Detail
Alliance Variant		 Chr4:150532428 Gm52709 within coordinates of
Rere Intron
 SNP G/T G T G G
rs32683978
MGI SNP Detail
Alliance Variant		 Chr4:150532441 Gm52709 within coordinates of
Rere Intron
 SNP A/T T T T T T T A T T T T T T T T
rs32683981
MGI SNP Detail
Alliance Variant		 Chr4:150532538 Gm52709 within coordinates of
Rere Intron
 SNP A/G A A A A A A A G A A A G G A A G A
rs108427817
MGI SNP Detail
Alliance Variant		 Chr4:150532588 Gm52709 within coordinates of
Rere Intron
 SNP A/G G G G A
rs32684804
MGI SNP Detail
Alliance Variant		 Chr4:150532875 Gm52709 within coordinates of
Rere Intron
 SNP A/T A A A A A A A A A A T A A A
rs32684807
MGI SNP Detail
Alliance Variant		 Chr4:150533098 Gm52709 within coordinates of
Rere Intron
 SNP G/T G G G G G G T G G G G G G G G
rs32684809
MGI SNP Detail
Alliance Variant		 Chr4:150533207 Gm52709 within coordinates of
Rere Intron
 SNP A/G A A A A A A G A A A A A A A A
rs32684811
MGI SNP Detail
Alliance Variant		 Chr4:150533310 Gm52709 within coordinates of
Rere Intron
 SNP A/G G G G G G G G G G G A G G G G
rs32684813
MGI SNP Detail
Alliance Variant		 Chr4:150533692 Gm52709 within coordinates of
Rere Intron
 SNP A/G G G G G G G A G G G A G G A G
rs32685676
MGI SNP Detail
Alliance Variant		 Chr4:150533942 Gm52709 within coordinates of
Rere Intron
 SNP C/T C C C C C C T C C C C C C C C
rs32772393
MGI SNP Detail
Alliance Variant		 Chr4:150534044 Gm52709 within coordinates of
Rere Intron
 SNP A/T A A T T T
rs32685679
MGI SNP Detail
Alliance Variant		 Chr4:150534115 Gm52709 within coordinates of
Rere Intron
 SNP A/T T T T T T T A T T T T T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
RF/J
RIIIS/J
SEA/GnJ
SM/J
SPRET/EiJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs32165986
MGI SNP Detail
Alliance Variant		 Chr4:150534349 Gm52709 within coordinates of
Rere Intron
 SNP A/G A G A G G G
rs32519053
MGI SNP Detail
Alliance Variant		 Chr4:150534421 Gm52709 within coordinates of
Rere Intron
 SNP A/T A A A T A T T A A T T A T A T T A T T
rs32685683
MGI SNP Detail
Alliance Variant		 Chr4:150534496 Gm52709 within coordinates of
Rere Intron
 SNP A/T T T T T T T A T T T T T T T T
rs32346392
MGI SNP Detail
Alliance Variant		 Chr4:150534842 Gm52709 within coordinates of
Rere Intron
 SNP G/T G G T G T G G G G G G G G G G G G
rs32686526
MGI SNP Detail
Alliance Variant		 Chr4:150534909 Gm52709 within coordinates of
Rere Intron
 SNP C/T T T T T T T C T T T T T T T T
rs32686528
MGI SNP Detail
Alliance Variant		 Chr4:150534933 Gm52709 within coordinates of
Rere Intron
 SNP C/T C C C C C C C C C C T C C T C
rs32686531
MGI SNP Detail
Alliance Variant		 Chr4:150535112 Gm52709 within coordinates of
Rere Intron
 SNP G/T T T T T T T G T T T G T T G T
rs32687434
MGI SNP Detail
Alliance Variant		 Chr4:150535244 Gm52709 within coordinates of
Rere Intron
 SNP A/G G G G G G G G G G G A G G A G
rs32687436
MGI SNP Detail
Alliance Variant		 Chr4:150535426 Gm52709 within coordinates of
Rere Intron
 SNP A/T A A A A A A T A A A T A A T A
rs32687439
MGI SNP Detail
Alliance Variant		 Chr4:150535439 Gm52709 within coordinates of
Rere Intron
 SNP A/G A A A A A A G A A A A A A A A
rs32907200
MGI SNP Detail
Alliance Variant		 Chr4:150536062 Gm52709 within coordinates of
Rere Intron
 SNP A/G G G G A A A
rs32687441
MGI SNP Detail
Alliance Variant		 Chr4:150536164 Gm52709 within coordinates of
Rere Intron
 SNP G/T T T G G G G G G G T G G G
rs32687443
MGI SNP Detail
Alliance Variant		 Chr4:150536275 Gm52709 within coordinates of
Rere Intron
 SNP C/T C C C C C C C C C C T C C T C
rs32305427
MGI SNP Detail
Alliance Variant		 Chr4:150536289 Gm52709 within coordinates of
Rere Intron
 SNP C/T T T C C C C C T C C C T C C C C C C C
rs32688497
MGI SNP Detail
Alliance Variant		 Chr4:150536482 Gm52709 within coordinates of
Rere Intron
 SNP C/T C C T C T C C C C C C C C C C C
rs32688500
MGI SNP Detail
Alliance Variant		 Chr4:150536520 Gm52709 within coordinates of
Rere Intron
 SNP A/G G G G G G G A G G G G G G G G
rs32688503
MGI SNP Detail
Alliance Variant		 Chr4:150536546 Gm52709 within coordinates of
Rere Intron
 SNP C/T C C C C C C C C C C T C C T C
rs50452439
MGI SNP Detail
Alliance Variant		 Chr4:150536879 Gm52709 within coordinates of
Rere Intron
 SNP C/T T C
rs32689236
MGI SNP Detail
Alliance Variant		 Chr4:150537052 Gm52709 within coordinates of
Rere Intron
 SNP A/T A A A A A A T A A A T A A T A
rs32678569
MGI SNP Detail
Alliance Variant		 Chr4:150537072 Gm52709 within coordinates of
Rere Intron
 SNP A/G A A G G G G G A G G A G G G G G G G
rs32689240
MGI SNP Detail
Alliance Variant		 Chr4:150537177 Gm52709 within coordinates of
Rere Intron
 SNP C/T T T T T T T C T T T C T T C T
rs32683094
MGI SNP Detail
Alliance Variant		 Chr4:150537493 Gm52709 within coordinates of
Rere Intron
 SNP A/G G G G G G G G G G G A G G A G
rs3695426
MGI SNP Detail
Alliance Variant		 Chr4:150537664 Gm52709 within coordinates of
Rere Intron
 SNP A/C C A C A C C C C C C C C C C C C
rs32683099
MGI SNP Detail
Alliance Variant		 Chr4:150537807 Gm52709 within coordinates of
Rere Intron
 SNP C/G C C C C C C C C C C G C C G C
rs32683102
MGI SNP Detail
Alliance Variant		 Chr4:150537903 Gm52709 within coordinates of
Rere Intron
 SNP C/T T T C T C C T T C C T C T C C T C C
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Showing SNP(s) 1 - 100 of 198
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory
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