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Mouse SNP Summary
Symbol
Name
ID 		Gm55682
predicted gene, 55682
MGI:6847831

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs241528991
MGI SNP Detail		 Chr1:87341022 Gigyf2 within coordinates of
Gm55682 1955 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs247053431
MGI SNP Detail		 Chr1:87341034 Gigyf2 within coordinates of
Gm55682 1943 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217336861
MGI SNP Detail		 Chr1:87341035 Gigyf2 within coordinates of
Gm55682 1942 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230103020
MGI SNP Detail		 Chr1:87341112 Gigyf2 within coordinates of
Gm55682 1865 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs249056757
MGI SNP Detail		 Chr1:87341121 Gigyf2 within coordinates of
Gm55682 1856 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs219544709
MGI SNP Detail		 Chr1:87341174 Gigyf2 within coordinates of
Gm55682 1803 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs236848750
MGI SNP Detail		 Chr1:87341207 Gigyf2 within coordinates of
Gm55682 1770 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262813558
MGI SNP Detail		 Chr1:87341281 Gigyf2 within coordinates of
Gm55682 1696 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs224868212
MGI SNP Detail		 Chr1:87341282 Gigyf2 within coordinates of
Gm55682 1695 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs250055966
MGI SNP Detail		 Chr1:87341314 Gigyf2 within coordinates of
Gm55682 1663 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261254159
MGI SNP Detail		 Chr1:87341478 Gigyf2 within coordinates of
Gm55682 1499 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs217864279
MGI SNP Detail		 Chr1:87341518 Gigyf2 within coordinates of
Gm55682 1459 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs237780257
MGI SNP Detail		 Chr1:87341567 Gigyf2 within coordinates of
Gm55682 1410 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs257311058
MGI SNP Detail		 Chr1:87341613 Gigyf2 within coordinates of
Gm55682 1364 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs223589749
MGI SNP Detail		 Chr1:87341807 Gigyf2 within coordinates of
Gm55682 1170 bp downstream
 SNP C/T T C
rs230944529
MGI SNP Detail		 Chr1:87341825 Gigyf2 within coordinates of
Gm55682 1152 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs246188392
MGI SNP Detail		 Chr1:87341826 Gigyf2 within coordinates of
Gm55682 1151 bp downstream
 SNP C/T T C
rs47855523
MGI SNP Detail		 Chr1:87342066 Gigyf2 within coordinates of
Gm55682 911 bp downstream
 SNP C/G G G G G G G G G G G G G G C G
rs232635639
MGI SNP Detail		 Chr1:87342077 Gigyf2 within coordinates of
Gm55682 900 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247041250
MGI SNP Detail		 Chr1:87342090 Gigyf2 within coordinates of
Gm55682 887 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs580723717
MGI SNP Detail		 Chr1:87342094 Gigyf2 within coordinates of
Gm55682 883 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs583215432
MGI SNP Detail		 Chr1:87342107 Gigyf2 within coordinates of
Gm55682 870 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217625944
MGI SNP Detail		 Chr1:87342126 Gigyf2 within coordinates of
Gm55682 851 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230048054
MGI SNP Detail		 Chr1:87342137 Gigyf2 within coordinates of
Gm55682 840 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243171294
MGI SNP Detail		 Chr1:87342148 Gigyf2 within coordinates of
Gm55682 829 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs50744200
MGI SNP Detail		 Chr1:87342154 Gigyf2 within coordinates of
Gm55682 823 bp downstream
 SNP C/T C C C C C C T C C C C C C C C
rs49873138
MGI SNP Detail		 Chr1:87342172 Gigyf2 within coordinates of
Gm55682 805 bp downstream
 SNP A/G G G G G G G A G G G A G G A G
rs258825555
MGI SNP Detail		 Chr1:87342177 Gigyf2 within coordinates of
Gm55682 800 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224984474
MGI SNP Detail		 Chr1:87342180 Gigyf2 within coordinates of
Gm55682 797 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs235468033
MGI SNP Detail		 Chr1:87342182 Gigyf2 within coordinates of
Gm55682 795 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255235262
MGI SNP Detail		 Chr1:87342188 Gigyf2 within coordinates of
Gm55682 789 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218166975
MGI SNP Detail		 Chr1:87342276 Gigyf2 within coordinates of
Gm55682 701 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs237719304
MGI SNP Detail		 Chr1:87342289 Gigyf2 within coordinates of
Gm55682 688 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257204815
MGI SNP Detail		 Chr1:87342332 Gigyf2 within coordinates of
Gm55682 645 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223040390
MGI SNP Detail		 Chr1:87342382 Gigyf2 within coordinates of
Gm55682 595 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs50850235
MGI SNP Detail		 Chr1:87342430 Gigyf2 within coordinates of
Gm55682 547 bp downstream
 SNP A/G A A A A A A A A A A G A A G A
rs587331030
MGI SNP Detail		 Chr1:87342662 Gigyf2 within coordinates of
Gm55682 315 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T G T T T T
rs581628535
MGI SNP Detail		 Chr1:87342664 Gigyf2 within coordinates of
Gm55682 313 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T G T G T T
rs263477425
MGI SNP Detail		 Chr1:87342773 Gigyf2 within coordinates of
Gm55682 204 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs233426333
MGI SNP Detail		 Chr1:87342792 Gigyf2 within coordinates of
Gm55682 185 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs246981916
MGI SNP Detail		 Chr1:87342799 Gigyf2 within coordinates of
Gm55682 178 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs260224907
MGI SNP Detail		 Chr1:87343072 Gigyf2 within coordinates of
Gm55682 1 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs223819390
MGI SNP Detail		 Chr1:87343147 Gigyf2 within coordinates of
Gm55682 76 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243439617
MGI SNP Detail		 Chr1:87343239 Gigyf2 within coordinates of
Gm55682 168 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs214250456
MGI SNP Detail		 Chr1:87343310 Gigyf2 within coordinates of
Gm55682 239 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs230970757
MGI SNP Detail		 Chr1:87343338 Gigyf2 within coordinates of
Gm55682 267 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs584993800
MGI SNP Detail		 Chr1:87343389 Gigyf2 within coordinates of
Gm55682 318 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs587239179
MGI SNP Detail		 Chr1:87343406 Gigyf2 within coordinates of
Gm55682 335 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C
rs578738565
MGI SNP Detail		 Chr1:87343450 Gigyf2 within coordinates of
Gm55682 379 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs257476053
MGI SNP Detail		 Chr1:87343496 Gigyf2 within coordinates of
Gm55682 425 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs256482520
MGI SNP Detail		 Chr1:87343518 Gigyf2 within coordinates of
Gm55682 447 bp upstream
 SNP A/C A C
rs216994887
MGI SNP Detail		 Chr1:87343526 Gigyf2 within coordinates of
Gm55682 455 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs235416276
MGI SNP Detail		 Chr1:87343612 Gigyf2 within coordinates of
Gm55682 541 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A A A C A A A A A A A C A A A A
rs220177484
MGI SNP Detail		 Chr1:87343886 Gigyf2 within coordinates of
Gm55682 815 bp upstream
 SNP C/T T C
rs211968869
MGI SNP Detail		 Chr1:87343941 Gigyf2 within coordinates of
Gm55682 870 bp upstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs230542085
MGI SNP Detail		 Chr1:87343946 Gigyf2 within coordinates of
Gm55682 875 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs48305255
MGI SNP Detail		 Chr1:87343987 Gigyf2 within coordinates of
Gm55682 916 bp upstream
 SNP C/T T T T T T T T T T T T T T C T
rs222735026
MGI SNP Detail		 Chr1:87344107 Gigyf2 within coordinates of
Gm55682 1036 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs244834410
MGI SNP Detail		 Chr1:87344182 Gigyf2 within coordinates of
Gm55682 1111 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs263210168
MGI SNP Detail		 Chr1:87344217 Gigyf2 within coordinates of
Gm55682 1146 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225562498
MGI SNP Detail		 Chr1:87344230 Gigyf2 within coordinates of
Gm55682 1159 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241361194
MGI SNP Detail		 Chr1:87344278 Gigyf2 within coordinates of
Gm55682 1207 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260112104
MGI SNP Detail		 Chr1:87344302 Gigyf2 within coordinates of
Gm55682 1231 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs581871038
MGI SNP Detail		 Chr1:87344359 Gigyf2 within coordinates of
Gm55682 1288 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs584349992
MGI SNP Detail		 Chr1:87344364 Gigyf2 within coordinates of
Gm55682 1293 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs241669214
MGI SNP Detail		 Chr1:87344417 Gigyf2 within coordinates of
Gm55682 1346 bp upstream
 SNP A/T A T
rs223734477
MGI SNP Detail		 Chr1:87344464 Gigyf2 within coordinates of
Gm55682 1393 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs237028854
MGI SNP Detail		 Chr1:87344496 Gigyf2 within coordinates of
Gm55682 1425 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262589075
MGI SNP Detail		 Chr1:87344500 Gigyf2 within coordinates of
Gm55682 1429 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs231250312
MGI SNP Detail		 Chr1:87344556 Gigyf2 within coordinates of
Gm55682 1485 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252375764
MGI SNP Detail		 Chr1:87344568 Gigyf2 within coordinates of
Gm55682 1497 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs51653465
MGI SNP Detail		 Chr1:87344730 Gigyf2 within coordinates of
Gm55682 1659 bp upstream
 SNP A/G A A A A A G A A A G A G A
rs228636554
MGI SNP Detail		 Chr1:87344897 Gigyf2 within coordinates of
Gm55682 1826 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs248992057
MGI SNP Detail		 Chr1:87345013 Gigyf2 within coordinates of
Gm55682 1942 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
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Showing SNP(s) 1 - 74 of 74
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory
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