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Mouse SNP Summary
Symbol
Name
ID 		Gm56036
predicted gene, 56036
MGI:6848531

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Showing SNP(s) 1 - 42 of 42

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs240652234
MGI SNP Detail		 Chr6:52221039 Gm56036 1950 bp upstream
Hoxa11 within coordinates of
Rr146302 within coordinates of
Rr379359 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs260493474
MGI SNP Detail		 Chr6:52221179 Gm56036 1810 bp upstream
Hoxa11 within coordinates of
Rr146302 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G G G G G G G G C G G G G G G G G G G G G
rs227540625
MGI SNP Detail		 Chr6:52221186 Gm56036 1803 bp upstream
Hoxa11 within coordinates of
Rr146302 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T C T T T T
rs241511916
MGI SNP Detail		 Chr6:52221235 Gm56036 1754 bp upstream
Hoxa11 within coordinates of
Rr146302 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs249324644
MGI SNP Detail		 Chr6:52221238 Gm56036 1751 bp upstream
Hoxa11 within coordinates of
Rr146302 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs52449907
MGI SNP Detail		 Chr6:52221259 Gm56036 1730 bp upstream
Hoxa11 within coordinates of
Rr146302 within coordinates of
 SNP C/T T T C T
rs225230886
MGI SNP Detail		 Chr6:52221352 Gm56036 1637 bp upstream
Hoxa11 within coordinates of
Rr146302 within coordinates of
 SNP A/C C A
rs238452252
MGI SNP Detail		 Chr6:52221387 Gm56036 1602 bp upstream
Hoxa11 within coordinates of
Rr146302 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs257262902
MGI SNP Detail		 Chr6:52221392 Gm56036 1597 bp upstream
Hoxa11 within coordinates of
Rr146302 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs232567144
MGI SNP Detail		 Chr6:52221523 Gm56036 1466 bp upstream
Hoxa11 within coordinates of
Rr146302 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T C T T T T
rs250340506
MGI SNP Detail		 Chr6:52221678 Gm56036 1311 bp upstream
Hoxa11 within coordinates of
Rr146302 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs264503635
MGI SNP Detail		 Chr6:52221690 Gm56036 1299 bp upstream
Hoxa11 within coordinates of
Rr146302 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs234879267
MGI SNP Detail		 Chr6:52221695 Gm56036 1294 bp upstream
Hoxa11 within coordinates of
Rr146302 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T C T T T T
rs584998212
MGI SNP Detail		 Chr6:52221751 Gm56036 1238 bp upstream
Hoxa11 within coordinates of
Rr146302 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs243411320
MGI SNP Detail		 Chr6:52222106 Cpgi17436 within coordinates of
Gm56036 883 bp upstream
Hoxa11 within coordinates of
Hoxa11os within coordinates of
Rr146302 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A G A A A A A A A A A A A A A A G A A A A
rs212890524
MGI SNP Detail		 Chr6:52222991 Cpgi17436 within coordinates of
Gm56036 within coordinates of
Hoxa11os within coordinates of
Rr146302 within coordinates of
Tssr56520 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs225700804
MGI SNP Detail		 Chr6:52223155 Cpgi17436 within coordinates of
Gm56036 71 bp downstream
Hoxa11os within coordinates of
Rr146302 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs245440811
MGI SNP Detail		 Chr6:52223324 Cpgi17436 within coordinates of
Gm56036 240 bp downstream
Hoxa11os within coordinates of
Rr146302 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs215732752
MGI SNP Detail		 Chr6:52223334 Cpgi17436 within coordinates of
Gm56036 250 bp downstream
Hoxa11os within coordinates of
Rr146302 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs238340632
MGI SNP Detail		 Chr6:52223340 Cpgi17436 within coordinates of
Gm56036 256 bp downstream
Hoxa11os within coordinates of
Rr146302 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263666083
MGI SNP Detail		 Chr6:52223755 Gm56036 671 bp downstream
Gm56038 within coordinates of
Hoxa11os within coordinates of
Rr146302 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs218861991
MGI SNP Detail		 Chr6:52223813 Gm56036 729 bp downstream
Hoxa11os within coordinates of
Rr146302 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs30662372
MGI SNP Detail		 Chr6:52223814 Gm56036 730 bp downstream
Hoxa11os within coordinates of
Rr146302 within coordinates of
 SNP C/G G G C
rs249116941
MGI SNP Detail		 Chr6:52223818 Gm56036 734 bp downstream
Hoxa11os within coordinates of
Rr146302 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs219697360
MGI SNP Detail		 Chr6:52223898 Gm56036 814 bp downstream
Hoxa11os within coordinates of
Rr146302 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs238732811
MGI SNP Detail		 Chr6:52223922 Gm56036 838 bp downstream
Hoxa11os within coordinates of
Rr146302 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs251314494
MGI SNP Detail		 Chr6:52224033 Gm56036 949 bp downstream
Hoxa11os within coordinates of
Rr146302 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G G G G G G G G C G G G G G G G G G G G G
rs225348368
MGI SNP Detail		 Chr6:52224049 Gm56036 965 bp downstream
Hoxa11os within coordinates of
Rr146302 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs247504818
MGI SNP Detail		 Chr6:52224063 Gm56036 979 bp downstream
Hoxa11os within coordinates of
Rr146302 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs266200582
MGI SNP Detail		 Chr6:52224113 Gm56036 1029 bp downstream
Hoxa11os within coordinates of
Rr146302 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs227880654
MGI SNP Detail		 Chr6:52224156 Gm56036 1072 bp downstream
Hoxa11os within coordinates of
Rr146302 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C C C C A C C C C C C C A C C C C
rs237082449
MGI SNP Detail		 Chr6:52224221 Gm56036 1137 bp downstream
Hoxa11os within coordinates of
Rr146302 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs256617574
MGI SNP Detail		 Chr6:52224298 Gm56036 1214 bp downstream
Hoxa11os within coordinates of
Rr146302 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs30014640
MGI SNP Detail		 Chr6:52224321 Gm56036 1237 bp downstream
Hoxa11os within coordinates of
Rr146302 within coordinates of
 SNP A/G A G G A G A
rs245737803
MGI SNP Detail		 Chr6:52224422 Gm56036 1338 bp downstream
Gm56039 within coordinates of
Hoxa11os within coordinates of
Rr146302 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263153614
MGI SNP Detail		 Chr6:52224529 Gm56036 1445 bp downstream
Gm56039 within coordinates of
Hoxa11os within coordinates of
Rr146302 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs232750067
MGI SNP Detail		 Chr6:52224641 Gm56036 1557 bp downstream
Hoxa11os within coordinates of
Rr146302 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs253613150
MGI SNP Detail		 Chr6:52224957 Gm56036 1873 bp downstream
Hoxa11os within coordinates of
Rr146302 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs218824476
MGI SNP Detail		 Chr6:52224969 Gm56036 1885 bp downstream
Hoxa11os within coordinates of
Rr146302 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs229700693
MGI SNP Detail		 Chr6:52225013 Gm56036 1929 bp downstream
Hoxa11os within coordinates of
Rr146302 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs243349820
MGI SNP Detail		 Chr6:52225069 Gm56036 1985 bp downstream
Hoxa11os within coordinates of
Rr146302 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30565002
MGI SNP Detail		 Chr6:52225078 Gm56036 1994 bp downstream
Hoxa11os within coordinates of
Rr146302 within coordinates of
 SNP A/G G G A A G A G
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Showing SNP(s) 1 - 42 of 42
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory