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Mouse SNP Summary
Symbol
Name
ID
Rr5052
regulatory region 5052
MGI:6893274

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Showing SNP(s) 1 - 53 of 53

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs579803181
MGI SNP Detail
ChrX:97724228 Ophn1 within coordinates of
Rr5052 1973 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228755677
MGI SNP Detail
ChrX:97724332 Ophn1 within coordinates of
Rr5052 1869 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs108658987
MGI SNP Detail
ChrX:97724366 Ophn1 within coordinates of
Rr5052 1835 bp proximal
SNP C/T C T
rs251845920
MGI SNP Detail
ChrX:97724372 Ophn1 within coordinates of
Rr5052 1829 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214300572
MGI SNP Detail
ChrX:97724407 Ophn1 within coordinates of
Rr5052 1794 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs108004827
MGI SNP Detail
ChrX:97724492 Ophn1 within coordinates of
Rr5052 1709 bp proximal
SNP C/T T C
rs238789295
MGI SNP Detail
ChrX:97724547 Ophn1 within coordinates of
Rr5052 1654 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs108210669
MGI SNP Detail
ChrX:97724564 Ophn1 within coordinates of
Rr5052 1637 bp proximal
SNP A/T T T A
rs217456708
MGI SNP Detail
ChrX:97724589 Ophn1 within coordinates of
Rr5052 1612 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs234516107
MGI SNP Detail
ChrX:97724656 Ophn1 within coordinates of
Rr5052 1545 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs252555340
MGI SNP Detail
ChrX:97724663 Ophn1 within coordinates of
Rr5052 1538 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs221285672
MGI SNP Detail
ChrX:97724707 Ophn1 within coordinates of
Rr5052 1494 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243978548
MGI SNP Detail
ChrX:97724830 Ophn1 within coordinates of
Rr5052 1371 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs257797187
MGI SNP Detail
ChrX:97724918 Ophn1 within coordinates of
Rr5052 1283 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs222072095
MGI SNP Detail
ChrX:97724937 Ophn1 within coordinates of
Rr5052 1264 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs241030001
MGI SNP Detail
ChrX:97724977 Ophn1 within coordinates of
Rr5052 1224 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs258767258
MGI SNP Detail
ChrX:97725077 Ophn1 within coordinates of
Rr5052 1124 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs229058687
MGI SNP Detail
ChrX:97725218 Ophn1 within coordinates of
Rr5052 983 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs583220513
MGI SNP Detail
ChrX:97725341 Ophn1 within coordinates of
Rr5052 860 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs31846648
MGI SNP Detail
ChrX:97725390 Ophn1 within coordinates of
Rr5052 811 bp proximal
SNP A/G A A A A A A G A A A A A G A
rs264938984
MGI SNP Detail
ChrX:97725522 Ophn1 within coordinates of
Rr5052 679 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs227957447
MGI SNP Detail
ChrX:97725582 Ophn1 within coordinates of
Rr5052 619 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs256594455
MGI SNP Detail
ChrX:97725718 Ophn1 within coordinates of
Rr5052 483 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G G
rs214315824
MGI SNP Detail
ChrX:97725862 Ophn1 within coordinates of
Rr5052 339 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A A A A A T A A A A A A A A A A A A
rs227883980
MGI SNP Detail
ChrX:97725967 Ophn1 within coordinates of
Rr5052 234 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs245368459
MGI SNP Detail
ChrX:97725994 Ophn1 within coordinates of
Rr5052 207 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T C C T T T T C T T T T C C T T T T T T C T T T T T T T C C T T T
rs217345566
MGI SNP Detail
ChrX:97726012 Ophn1 within coordinates of
Rr5052 189 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs586615437
MGI SNP Detail
ChrX:97726098 Ophn1 within coordinates of
Rr5052 103 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238726729
MGI SNP Detail
ChrX:97726121 Ophn1 within coordinates of
Rr5052 80 bp proximal
SNP C/T T C
rs234556210
MGI SNP Detail
ChrX:97726444 Ophn1 within coordinates of
Rr5052 within coordinates of
Rr8080 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs249025119
MGI SNP Detail
ChrX:97726495 Ophn1 within coordinates of
Rr5052 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs213113200
MGI SNP Detail
ChrX:97726580 Ophn1 within coordinates of
Rr5052 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A T A T T A A A A T A A A A T A A A A A A T A A A A A T T A A A
rs234592844
MGI SNP Detail
ChrX:97726609 Ophn1 within coordinates of
Rr5052 9 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs262382017
MGI SNP Detail
ChrX:97726776 Ophn1 within coordinates of
Rr5052 176 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs222578573
MGI SNP Detail
ChrX:97726881 Ophn1 within coordinates of
Rr5052 281 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs241229516
MGI SNP Detail
ChrX:97727009 Ophn1 within coordinates of
Rr5052 409 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs252519431
MGI SNP Detail
ChrX:97727345 Ophn1 within coordinates of
Rr5052 745 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223138282
MGI SNP Detail
ChrX:97727403 Ophn1 within coordinates of
Rr5052 803 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241796104
MGI SNP Detail
ChrX:97727409 Ophn1 within coordinates of
Rr5052 809 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs261808257
MGI SNP Detail
ChrX:97727435 Ophn1 within coordinates of
Rr5052 835 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29084664
MGI SNP Detail
ChrX:97727822 Ophn1 within coordinates of
Rr5052 1222 bp distal
SNP A/G G G G G G G A G G G A G G A G
rs244494526
MGI SNP Detail
ChrX:97727826 Ophn1 within coordinates of
Rr5052 1226 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs265140340
MGI SNP Detail
ChrX:97728048 Ophn1 within coordinates of
Rr5052 1448 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs227916968
MGI SNP Detail
ChrX:97728134 Ophn1 within coordinates of
Rr5052 1534 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs245578287
MGI SNP Detail
ChrX:97728166 Ophn1 within coordinates of
Rr5052 1566 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C T C C C C C C C C C C C
rs259945717
MGI SNP Detail
ChrX:97728257 Ophn1 within coordinates of
Rr5052 1657 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228463675
MGI SNP Detail
ChrX:97728441 Ophn1 within coordinates of
Rr5052 1841 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs254289866
MGI SNP Detail
ChrX:97728488 Ophn1 within coordinates of
Rr5052 1888 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C T C C C C C C T C C C C C C C C C C
rs212239824
MGI SNP Detail
ChrX:97728489 Ophn1 within coordinates of
Rr5052 1889 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239162927
MGI SNP Detail
ChrX:97728494 Ophn1 within coordinates of
Rr5052 1894 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T C T T T T T T C T T T T T T T T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs251428448
MGI SNP Detail
ChrX:97728496 Ophn1 within coordinates of
Rr5052 1896 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs214012409
MGI SNP Detail
ChrX:97728524 Ophn1 within coordinates of
Rr5052 1924 bp distal
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs585410867
MGI SNP Detail
ChrX:97728551 Ophn1 within coordinates of
Rr5052 1951 bp distal
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
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Showing SNP(s) 1 - 53 of 53

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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory

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