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Mouse SNP Summary
Symbol
Name
ID
Rr5074
regulatory region 5074
MGI:6893296

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Showing SNP(s) 1 - 66 of 66

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs252474860
MGI SNP Detail
ChrX:98176404 Rr5074 1997 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214412257
MGI SNP Detail
ChrX:98176425 Rr5074 1976 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231111284
MGI SNP Detail
ChrX:98176469 Rr5074 1932 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs29084867
MGI SNP Detail
ChrX:98176486 Rr5074 1915 bp proximal
SNP A/G G G G G G G G G G G G G G G A
rs214974328
MGI SNP Detail
ChrX:98176510 Rr5074 1891 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234905251
MGI SNP Detail
ChrX:98176530 Rr5074 1871 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs260492174
MGI SNP Detail
ChrX:98176535 Rr5074 1866 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs31844145
MGI SNP Detail
ChrX:98176560 Rr5074 1841 bp proximal
SNP A/G G G G G G A G G G G G G G G
rs241686353
MGI SNP Detail
ChrX:98176619 Rr5074 1782 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31844144
MGI SNP Detail
ChrX:98176658 Rr5074 1743 bp proximal
SNP C/T T T T T T C T T T T T T T T
rs219665119
MGI SNP Detail
ChrX:98176737 Rr5074 1664 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs241326754
MGI SNP Detail
ChrX:98176878 Rr5074 1523 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A
rs585293301
MGI SNP Detail
ChrX:98176919 Rr5074 1482 bp proximal
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs259338583
MGI SNP Detail
ChrX:98177091 Rr5074 1310 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs229386235
MGI SNP Detail
ChrX:98177137 Rr5074 1264 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs242127269
MGI SNP Detail
ChrX:98177160 Rr5074 1241 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs263963310
MGI SNP Detail
ChrX:98177166 Rr5074 1235 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs229048902
MGI SNP Detail
ChrX:98177170 Rr5074 1231 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249138832
MGI SNP Detail
ChrX:98177273 Rr5074 1128 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29084866
MGI SNP Detail
ChrX:98177349 Rr5074 1052 bp proximal
SNP C/T C C C C C C T C C C T C C T C
rs224973422
MGI SNP Detail
ChrX:98177386 Rr5074 1015 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs245690945
MGI SNP Detail
ChrX:98177469 Rr5074 932 bp proximal
SNP C/G/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs214835426
MGI SNP Detail
ChrX:98177613 Rr5074 788 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs29084865
MGI SNP Detail
ChrX:98177665 Rr5074 736 bp proximal
SNP C/T T T T T T T C T T T C T T C T
rs258925057
MGI SNP Detail
ChrX:98177689 Rr5074 712 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs213138247
MGI SNP Detail
ChrX:98177760 Rr5074 641 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs236573921
MGI SNP Detail
ChrX:98177809 Rr5074 592 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs258266450
MGI SNP Detail
ChrX:98177812 Rr5074 589 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs29084864
MGI SNP Detail
ChrX:98177844 Rr5074 557 bp proximal
SNP A/G/T A A A A A A A A A A A A A A A A A A A G A G G A A A A G A A A A A G A A A A A A T A A A A A A A G A A A
rs235122791
MGI SNP Detail
ChrX:98178131 Rr5074 270 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29084303
MGI SNP Detail
ChrX:98178152 Rr5074 249 bp proximal
SNP G/T G G G G G G G G G G G G G G T
rs31843313
MGI SNP Detail
ChrX:98178166 Rr5074 235 bp proximal
SNP A/G A A A A A A G A A A A A A A A
rs247673405
MGI SNP Detail
ChrX:98178232 Rr5074 169 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs264900922
MGI SNP Detail
ChrX:98178237 Rr5074 164 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs221365266
MGI SNP Detail
ChrX:98178294 Rr5074 107 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T
rs243838447
MGI SNP Detail
ChrX:98178313 Rr5074 88 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs262693717
MGI SNP Detail
ChrX:98178325 Rr5074 76 bp proximal
SNP A/C/T C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs225276051
MGI SNP Detail
ChrX:98178328 Rr5074 73 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs245928591
MGI SNP Detail
ChrX:98178376 Rr5074 25 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs256884664
MGI SNP Detail
ChrX:98178390 Rr5074 11 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs582570766
MGI SNP Detail
ChrX:98178402 Rr5074 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs228918152
MGI SNP Detail
ChrX:98178469 Rr5074 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31843312
MGI SNP Detail
ChrX:98178482 Rr5074 within coordinates of
SNP C/T C C C C C C T C C C C C C C C
rs212974863
MGI SNP Detail
ChrX:98178537 Rr5074 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs234997430
MGI SNP Detail
ChrX:98178550 Rr5074 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs256604596
MGI SNP Detail
ChrX:98178574 Rr5074 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29084302
MGI SNP Detail
ChrX:98178710 Rr5074 110 bp distal
Rr8874 within coordinates of
SNP A/G A A A A A A A A A A G A A G A
rs235187675
MGI SNP Detail
ChrX:98178751 Rr5074 151 bp distal
Rr8874 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs253194632
MGI SNP Detail
ChrX:98178959 Rr5074 359 bp distal
Rr8874 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223544386
MGI SNP Detail
ChrX:98178999 Rr5074 399 bp distal
Rr8874 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs242157471
MGI SNP Detail
ChrX:98179064 Rr5074 464 bp distal
Rr8874 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256495931
MGI SNP Detail
ChrX:98179112 Rr5074 512 bp distal
Rr8874 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs220316532
MGI SNP Detail
ChrX:98179162 Rr5074 562 bp distal
Rr8874 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C
rs256187853
MGI SNP Detail
ChrX:98179220 Rr5074 620 bp distal
Rr8874 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs219250829
MGI SNP Detail
ChrX:98179250 Rr5074 650 bp distal
Rr8874 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T
rs240031411
MGI SNP Detail
ChrX:98179260 Rr5074 660 bp distal
Rr8874 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs257180564
MGI SNP Detail
ChrX:98179489 Cpgi22850 within coordinates of
Rr406150 within coordinates of
Rr5074 889 bp distal
Rr8874 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T
rs233598304
MGI SNP Detail
ChrX:98179522 Cpgi22850 within coordinates of
Rr406150 within coordinates of
Rr5074 922 bp distal
Rr8874 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs249748014
MGI SNP Detail
ChrX:98179526 Cpgi22850 within coordinates of
Rr406150 within coordinates of
Rr5074 926 bp distal
Rr8874 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs261756307
MGI SNP Detail
ChrX:98179592 Cpgi22850 within coordinates of
Rr406150 within coordinates of
Rr5074 992 bp distal
Rr8874 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G
rs227867913
MGI SNP Detail
ChrX:98179688 Cpgi22850 within coordinates of
Rr406150 within coordinates of
Rr5074 1088 bp distal
Rr8874 within coordinates of
Tssr161599 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs251260486
MGI SNP Detail
ChrX:98179761 Cpgi22850 within coordinates of
Efnb1 within coordinates of
Rr5074 1161 bp distal
Rr8874 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs213936268
MGI SNP Detail
ChrX:98179861 Cpgi22850 within coordinates of
Efnb1 within coordinates of
Rr5074 1261 bp distal
Rr8874 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs228238994
MGI SNP Detail
ChrX:98180130 Cpgi22850 within coordinates of
Efnb1 within coordinates of
Rr5074 1530 bp distal
Rr8874 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs246890434
MGI SNP Detail
ChrX:98180167 Cpgi22850 within coordinates of
Efnb1 within coordinates of
Rr5074 1567 bp distal
Rr8874 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs217769714
MGI SNP Detail
ChrX:98180230 Cpgi22850 within coordinates of
Efnb1 within coordinates of
Rr5074 1630 bp distal
Rr8874 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 66 of 66

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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory