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Mouse SNP Summary
Symbol
Name
ID 		Rr5276
regulatory region 5276
MGI:6893498

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Showing SNP(s) 1 - 64 of 64

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs264964496
MGI SNP Detail		 ChrX:11228238 Gm39495 within coordinates of
Rr5276 1962 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs223896592
MGI SNP Detail		 ChrX:11228312 Gm39495 within coordinates of
Rr5276 1888 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs248507895
MGI SNP Detail		 ChrX:11228334 Gm39495 within coordinates of
Rr5276 1866 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs33563092
MGI SNP Detail		 ChrX:11228424 Gm39495 within coordinates of
Rr5276 1776 bp proximal
 SNP C/G G G G G G G G G G C G G C G
rs33563815
MGI SNP Detail		 ChrX:11228472 Gm39495 within coordinates of
Rr5276 1728 bp proximal
 SNP A/G A A A A A A A A A A G A A G A
rs256978958
MGI SNP Detail		 ChrX:11228487 Gm39495 within coordinates of
Rr5276 1713 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs214575588
MGI SNP Detail		 ChrX:11228549 Gm39495 within coordinates of
Rr5276 1651 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs33563817
MGI SNP Detail		 ChrX:11228556 Gm39495 within coordinates of
Rr5276 1644 bp proximal
 SNP G/T T T T T T T T T T G T G G T
rs256227768
MGI SNP Detail		 ChrX:11228676 Gm39495 within coordinates of
Rr5276 1524 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217971933
MGI SNP Detail		 ChrX:11228679 Gm39495 within coordinates of
Rr5276 1521 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs230050480
MGI SNP Detail		 ChrX:11228691 Gm39495 within coordinates of
Rr5276 1509 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C C
rs33563820
MGI SNP Detail		 ChrX:11228756 Gm39495 within coordinates of
Rr5276 1444 bp proximal
 SNP C/T C C C C C C C C C T C T C
rs222012046
MGI SNP Detail		 ChrX:11228776 Gm39495 within coordinates of
Rr5276 1424 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs246579953
MGI SNP Detail		 ChrX:11228862 Gm39495 within coordinates of
Rr5276 1338 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs265553911
MGI SNP Detail		 ChrX:11228886 Gm39495 within coordinates of
Rr5276 1314 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs223733601
MGI SNP Detail		 ChrX:11228959 Gm39495 within coordinates of
Rr5276 1241 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A T A A A A A A T A A A A A A A A A A A A
rs246312122
MGI SNP Detail		 ChrX:11228972 Gm39495 within coordinates of
Rr5276 1228 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs262143164
MGI SNP Detail		 ChrX:11229031 Gm39495 within coordinates of
Rr5276 1169 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs33563823
MGI SNP Detail		 ChrX:11229033 Gm39495 within coordinates of
Rr5276 1167 bp proximal
 SNP A/G G G G G G G G G G A G G A G
rs33564666
MGI SNP Detail		 ChrX:11229087 Gm39495 within coordinates of
Rr5276 1113 bp proximal
 SNP C/G G G G G G G G G G C G G C G
rs260334496
MGI SNP Detail		 ChrX:11229112 Gm39495 within coordinates of
Rr5276 1088 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G A G G G
rs227833248
MGI SNP Detail		 ChrX:11229235 Gm39495 within coordinates of
Rr5276 965 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs252025956
MGI SNP Detail		 ChrX:11229520 Gm39495 within coordinates of
Rr5276 680 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs214844835
MGI SNP Detail		 ChrX:11229561 Gm39495 within coordinates of
Rr5276 639 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs229794330
MGI SNP Detail		 ChrX:11229666 Gm39495 within coordinates of
Rr5276 534 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs33564669
MGI SNP Detail		 ChrX:11229724 Gm39495 within coordinates of
Rr5276 476 bp proximal
 SNP C/T C C C C C C C C C T C T C
rs578740076
MGI SNP Detail		 ChrX:11229743 Gm39495 within coordinates of
Rr5276 457 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T
rs212048946
MGI SNP Detail		 ChrX:11229777 Gm39495 within coordinates of
Rr5276 423 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs235214128
MGI SNP Detail		 ChrX:11229822 Gm39495 within coordinates of
Rr5276 378 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs252609168
MGI SNP Detail		 ChrX:11229947 Gm39495 within coordinates of
Rr5276 253 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs216770287
MGI SNP Detail		 ChrX:11230486 Rr5276 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G
rs33564671
MGI SNP Detail		 ChrX:11230605 Rr5276 within coordinates of
 SNP C/T T T T T C C T
rs241137643
MGI SNP Detail		 ChrX:11230645 Rr5276 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs258838126
MGI SNP Detail		 ChrX:11230688 Rr5276 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs223311729
MGI SNP Detail		 ChrX:11230913 Rr5276 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs243493940
MGI SNP Detail		 ChrX:11231009 Rr5276 9 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250666631
MGI SNP Detail		 ChrX:11231281 Rr5276 281 bp distal
Rr9041 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218395361
MGI SNP Detail		 ChrX:11231291 Rr5276 291 bp distal
Rr9041 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243155006
MGI SNP Detail		 ChrX:11231309 Rr5276 309 bp distal
Rr9041 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33565724
MGI SNP Detail		 ChrX:11231366 Rr5276 366 bp distal
Rr9041 within coordinates of
 SNP C/T C C C C C C C C C T C C T C
rs33565727
MGI SNP Detail		 ChrX:11231604 Rr5276 604 bp distal
Rr9041 within coordinates of
 SNP C/T C C C C C C C C C C C C T C
rs33565730
MGI SNP Detail		 ChrX:11231690 Rr5276 690 bp distal
Rr9041 within coordinates of
 SNP A/G G G G G G G G G G A G G A G
rs581031164
MGI SNP Detail		 ChrX:11231769 Rr5276 769 bp distal
Rr9041 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247378272
MGI SNP Detail		 ChrX:11231884 Rr5276 884 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C A C C C C A C A C C C C C C C A C C C
rs262672928
MGI SNP Detail		 ChrX:11231926 Rr5276 926 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C G C C C C C C C C C C C C
rs578943328
MGI SNP Detail		 ChrX:11231957 Rr5276 957 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs229887227
MGI SNP Detail		 ChrX:11232008 Rr5276 1008 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C C C C C T C C C C C C C C C C C
rs249668260
MGI SNP Detail		 ChrX:11232057 Rr5276 1057 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs211981932
MGI SNP Detail		 ChrX:11232060 Rr5276 1060 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs229108451
MGI SNP Detail		 ChrX:11232079 Rr5276 1079 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs246703362
MGI SNP Detail		 ChrX:11232259 Rr5276 1259 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs215877368
MGI SNP Detail		 ChrX:11232285 Rr5276 1285 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs33565732
MGI SNP Detail		 ChrX:11232357 Rr5276 1357 bp distal
 SNP G/T G G G G G G G G T G T G
rs262920166
MGI SNP Detail		 ChrX:11232396 Rr5276 1396 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs214954684
MGI SNP Detail		 ChrX:11232397 Rr5276 1397 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs33566685
MGI SNP Detail		 ChrX:11232510 Rr5276 1510 bp distal
 SNP A/T T T T T T T T T T A T T A T
rs250606476
MGI SNP Detail		 ChrX:11232627 Rr5276 1627 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs218428237
MGI SNP Detail		 ChrX:11232690 Rr5276 1690 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs243005579
MGI SNP Detail		 ChrX:11232763 Rr5276 1763 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs254847428
MGI SNP Detail		 ChrX:11232870 Rr5276 1870 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs225614716
MGI SNP Detail		 ChrX:11232887 Rr5276 1887 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs244784220
MGI SNP Detail		 ChrX:11232889 Rr5276 1889 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs265184382
MGI SNP Detail		 ChrX:11232893 Rr5276 1893 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs229434869
MGI SNP Detail		 ChrX:11232926 Rr5276 1926 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
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Showing SNP(s) 1 - 64 of 64
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory
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