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Mouse SNP Summary
Symbol
Name
ID
Rr5308
regulatory region 5308
MGI:6893530

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs236135076
MGI SNP Detail
ChrX:11748011 Gm52427 within coordinates of
Rr5308 1990 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs260275514
MGI SNP Detail
ChrX:11748038 Gm52427 within coordinates of
Rr5308 1963 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228838021
MGI SNP Detail
ChrX:11748057 Gm52427 within coordinates of
Rr5308 1944 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs245725508
MGI SNP Detail
ChrX:11748063 Gm52427 within coordinates of
Rr5308 1938 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A G G A A G
rs215310007
MGI SNP Detail
ChrX:11748068 Gm52427 within coordinates of
Rr5308 1933 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230730295
MGI SNP Detail
ChrX:11748213 Gm52427 within coordinates of
Rr5308 1788 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs250504320
MGI SNP Detail
ChrX:11748216 Gm52427 within coordinates of
Rr5308 1785 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs212941828
MGI SNP Detail
ChrX:11748525 Gm52427 within coordinates of
Rr5308 1476 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs234581541
MGI SNP Detail
ChrX:11748592 Gm52427 within coordinates of
Rr5308 1409 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs255118855
MGI SNP Detail
ChrX:11748602 Gm52427 within coordinates of
Rr5308 1399 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs216701514
MGI SNP Detail
ChrX:11748676 Gm52427 within coordinates of
Rr5308 1325 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs234739868
MGI SNP Detail
ChrX:11748973 Gm52427 within coordinates of
Rr5308 1028 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs252754408
MGI SNP Detail
ChrX:11748974 Gm52427 within coordinates of
Rr5308 1027 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs224307778
MGI SNP Detail
ChrX:11749029 Gm52427 within coordinates of
Rr5308 972 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs246925424
MGI SNP Detail
ChrX:11749034 Gm52427 within coordinates of
Rr5308 967 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs257288383
MGI SNP Detail
ChrX:11749060 Gm52427 within coordinates of
Rr5308 941 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A G A A A A
rs221273952
MGI SNP Detail
ChrX:11749107 Gm52427 within coordinates of
Rr5308 894 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236203514
MGI SNP Detail
ChrX:11749129 Gm52427 within coordinates of
Rr5308 872 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T G T T T T T T T T T T T T
rs260139147
MGI SNP Detail
ChrX:11749166 Gm52427 within coordinates of
Rr5308 835 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs228711182
MGI SNP Detail
ChrX:11749170 Gm52427 within coordinates of
Rr5308 831 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs240412977
MGI SNP Detail
ChrX:11749172 Gm52427 within coordinates of
Rr5308 829 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs265595511
MGI SNP Detail
ChrX:11749240 Gm52427 within coordinates of
Rr5308 761 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230645171
MGI SNP Detail
ChrX:11749305 Gm52427 within coordinates of
Rr5308 696 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs254817997
MGI SNP Detail
ChrX:11749325 Gm52427 within coordinates of
Rr5308 676 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs212627850
MGI SNP Detail
ChrX:11749448 Gm52427 within coordinates of
Rr5308 553 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs224007450
MGI SNP Detail
ChrX:11749459 Gm52427 within coordinates of
Rr5308 542 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs248715628
MGI SNP Detail
ChrX:11749465 Gm52427 within coordinates of
Rr5308 536 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A G A A A G A A A A A A G A A A A A A A G A A A A
rs216576873
MGI SNP Detail
ChrX:11749594 Gm52427 within coordinates of
Rr5308 407 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs234627879
MGI SNP Detail
ChrX:11749610 Gm52427 within coordinates of
Rr5308 391 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A G A A A A A A G A A A A A A G G A A G G
rs252262105
MGI SNP Detail
ChrX:11749624 Gm52427 within coordinates of
Rr5308 377 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs215098541
MGI SNP Detail
ChrX:11749647 Gm52427 within coordinates of
Rr5308 354 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs237102851
MGI SNP Detail
ChrX:11749715 Gm52427 within coordinates of
Rr5308 286 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs262057578
MGI SNP Detail
ChrX:11750026 Gm52427 within coordinates of
Rr5308 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs221886762
MGI SNP Detail
ChrX:11750029 Gm52427 within coordinates of
Rr5308 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230158648
MGI SNP Detail
ChrX:11750096 Gm52427 within coordinates of
Rr5308 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T C T T T C T T T T T T C T T T T T T T C T T T T
rs253301245
MGI SNP Detail
ChrX:11750170 Gm52427 within coordinates of
Rr5308 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C
rs222204422
MGI SNP Detail
ChrX:11750194 Gm52427 within coordinates of
Rr5308 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C G C C C G C C C C C C G C C C C C C C C C C C C
rs240274629
MGI SNP Detail
ChrX:11750341 Gm52427 within coordinates of
Rr5308 141 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs263373989
MGI SNP Detail
ChrX:11750491 Gm52427 within coordinates of
Rr5308 291 bp distal
Rr9069 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A G A A A G A A A A A A G A A A A A A A G A A A A
rs223580471
MGI SNP Detail
ChrX:11750667 Gm52427 within coordinates of
Rr5308 467 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242794400
MGI SNP Detail
ChrX:11750735 Gm52427 within coordinates of
Rr5308 535 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs264774010
MGI SNP Detail
ChrX:11750759 Gm52427 within coordinates of
Rr5308 559 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs223874343
MGI SNP Detail
ChrX:11750812 Gm52427 within coordinates of
Rr5308 612 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248597844
MGI SNP Detail
ChrX:11750873 Gm52427 within coordinates of
Rr5308 673 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260422629
MGI SNP Detail
ChrX:11750874 Gm52427 within coordinates of
Rr5308 674 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs228035266
MGI SNP Detail
ChrX:11750883 Gm52427 within coordinates of
Rr5308 683 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs257073999
MGI SNP Detail
ChrX:11750976 Gm52427 within coordinates of
Rr5308 776 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs214787797
MGI SNP Detail
ChrX:11751024 Gm52427 within coordinates of
Rr5308 824 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs238023087
MGI SNP Detail
ChrX:11751081 Gm52427 within coordinates of
Rr5308 881 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249829163
MGI SNP Detail
ChrX:11751115 Gm52427 within coordinates of
Rr5308 915 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs212969955
MGI SNP Detail
ChrX:11751183 Gm52427 within coordinates of
Rr5308 983 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G
rs230032756
MGI SNP Detail
ChrX:11751263 Gm52427 within coordinates of
Rr5308 1063 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253358594
MGI SNP Detail
ChrX:11751567 Gm52427 within coordinates of
Rr5308 1367 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222083835
MGI SNP Detail
ChrX:11751802 Gm52427 within coordinates of
Rr5308 1602 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs238991185
MGI SNP Detail
ChrX:11751845 Gm52427 within coordinates of
Rr5308 1645 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A G A A A G A A A A A A G A A A A A A A G A A A A
rs263048816
MGI SNP Detail
ChrX:11751854 Gm52427 within coordinates of
Rr5308 1654 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs223852167
MGI SNP Detail
ChrX:11751863 Gm52427 within coordinates of
Rr5308 1663 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246400883
MGI SNP Detail
ChrX:11751875 Gm52427 within coordinates of
Rr5308 1675 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs262137933
MGI SNP Detail
ChrX:11751892 Gm52427 within coordinates of
Rr5308 1692 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs217880464
MGI SNP Detail
ChrX:11751897 Gm52427 within coordinates of
Rr5308 1697 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs242449633
MGI SNP Detail
ChrX:11751912 Gm52427 within coordinates of
Rr5308 1712 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260471247
MGI SNP Detail
ChrX:11752038 Gm52427 within coordinates of
Rr5308 1838 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227907038
MGI SNP Detail
ChrX:11752042 Gm52427 within coordinates of
Rr5308 1842 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252187705
MGI SNP Detail
ChrX:11752055 Gm52427 within coordinates of
Rr5308 1855 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs265255075
MGI SNP Detail
ChrX:11752118 Gm52427 within coordinates of
Rr5308 1918 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs229669163
MGI SNP Detail
ChrX:11752159 Gm52427 within coordinates of
Rr5308 1959 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs254196839
MGI SNP Detail
ChrX:11752160 Gm52427 within coordinates of
Rr5308 1960 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
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Showing SNP(s) 1 - 67 of 67

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory

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