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Mouse SNP Summary
Symbol
Name
ID
Rr6306
regulatory region 6306
MGI:6894528

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs580315218
MGI SNP Detail
ChrX:102621471 Ftx within coordinates of
Rr6306 1783 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs582994441
MGI SNP Detail
ChrX:102621487 Ftx within coordinates of
Rr6306 1767 bp proximal
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs217122518
MGI SNP Detail
ChrX:102621561 Ftx within coordinates of
Rr6306 1693 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T G T G G T T T T G T G T T T G T T T T T T G T T T T T T T G T T T T
rs237781020
MGI SNP Detail
ChrX:102621577 Ftx within coordinates of
Rr6306 1677 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T
rs260005121
MGI SNP Detail
ChrX:102621580 Ftx within coordinates of
Rr6306 1674 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A A A A A A A T A A A A A A A A A A
rs219494353
MGI SNP Detail
ChrX:102621652 Ftx within coordinates of
Rr6306 1602 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs31825954
MGI SNP Detail
ChrX:102621670 Ftx within coordinates of
Rr6306 1584 bp proximal
SNP A/T T T T T T T A T T T T T T T T
rs31825093
MGI SNP Detail
ChrX:102621738 Ftx within coordinates of
Rr6306 1516 bp proximal
SNP C/T T T T T T T C T T T T T T T T
rs217991942
MGI SNP Detail
ChrX:102621873 Ftx within coordinates of
Rr6306 1381 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs232200456
MGI SNP Detail
ChrX:102621874 Ftx within coordinates of
Rr6306 1380 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs257473834
MGI SNP Detail
ChrX:102621903 Ftx within coordinates of
Rr6306 1351 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31825092
MGI SNP Detail
ChrX:102621939 Ftx within coordinates of
Rr6306 1315 bp proximal
SNP G/T T T T T G T T T T T T T T
rs31825091
MGI SNP Detail
ChrX:102621963 Ftx within coordinates of
Rr6306 1291 bp proximal
SNP A/C A A A A A A C A A A A A A A A
rs31825090
MGI SNP Detail
ChrX:102622020 Ftx within coordinates of
Rr6306 1234 bp proximal
SNP A/C C C C C C A C C C C C C C
rs222452106
MGI SNP Detail
ChrX:102622026 Ftx within coordinates of
Rr6306 1228 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29081620
MGI SNP Detail
ChrX:102622056 Ftx within coordinates of
Rr6306 1198 bp proximal
SNP A/G G G G G G G G G G G A G G G G
rs237798635
MGI SNP Detail
ChrX:102622085 Ftx within coordinates of
Rr6306 1169 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs585463562
MGI SNP Detail
ChrX:102622109 Ftx within coordinates of
Rr6306 1145 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs579748524
MGI SNP Detail
ChrX:102622145 Ftx within coordinates of
Rr6306 1109 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255811068
MGI SNP Detail
ChrX:102622161 Ftx within coordinates of
Rr6306 1093 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs226299896
MGI SNP Detail
ChrX:102622221 Ftx within coordinates of
Rr6306 1033 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs31825089
MGI SNP Detail
ChrX:102622229 Ftx within coordinates of
Rr6306 1025 bp proximal
SNP A/G G G G G G G A G G G G G G G G
rs31825088
MGI SNP Detail
ChrX:102622322 Ftx within coordinates of
Rr6306 932 bp proximal
SNP C/T C C C C C C T C C C C C C C C
rs232054792
MGI SNP Detail
ChrX:102622333 Ftx within coordinates of
Rr6306 921 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs31825087
MGI SNP Detail
ChrX:102622370 Ftx within coordinates of
Rr6306 884 bp proximal
SNP C/T C C C C C C T C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29081619
MGI SNP Detail
ChrX:102622371 Ftx within coordinates of
Rr6306 883 bp proximal
SNP C/T C C C C C C C C C C T C C C C
rs217891652
MGI SNP Detail
ChrX:102622413 Ftx within coordinates of
Rr6306 841 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228661407
MGI SNP Detail
ChrX:102622430 Ftx within coordinates of
Rr6306 824 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243272634
MGI SNP Detail
ChrX:102622463 Ftx within coordinates of
Rr6306 791 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212241213
MGI SNP Detail
ChrX:102622527 Ftx within coordinates of
Rr6306 727 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C
rs232230333
MGI SNP Detail
ChrX:102622540 Ftx within coordinates of
Rr6306 714 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C
rs262042033
MGI SNP Detail
ChrX:102622558 Ftx within coordinates of
Rr6306 696 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217355702
MGI SNP Detail
ChrX:102622574 Ftx within coordinates of
Rr6306 680 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs240383003
MGI SNP Detail
ChrX:102622589 Ftx within coordinates of
Rr6306 665 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs261107829
MGI SNP Detail
ChrX:102622595 Ftx within coordinates of
Rr6306 659 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223010692
MGI SNP Detail
ChrX:102622652 Ftx within coordinates of
Rr6306 602 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs238343730
MGI SNP Detail
ChrX:102622654 Ftx within coordinates of
Rr6306 600 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs249406908
MGI SNP Detail
ChrX:102622753 Ftx within coordinates of
Rr6306 501 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs31825086
MGI SNP Detail
ChrX:102622832 Ftx within coordinates of
Rr6306 422 bp proximal
SNP C/T T T T T T C T T T T T T T T
rs242763132
MGI SNP Detail
ChrX:102623170 Ftx within coordinates of
Rr6306 84 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs265621994
MGI SNP Detail
ChrX:102623241 Ftx within coordinates of
Rr6306 13 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs231629204
MGI SNP Detail
ChrX:102623262 Ftx within coordinates of
Rr6306 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs251194653
MGI SNP Detail
ChrX:102623275 Ftx within coordinates of
Rr6306 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs258967527
MGI SNP Detail
ChrX:102623286 Ftx within coordinates of
Rr6306 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs224255049
MGI SNP Detail
ChrX:102623288 Ftx within coordinates of
Rr6306 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242182990
MGI SNP Detail
ChrX:102623433 Ftx within coordinates of
Rr6306 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs31825085
MGI SNP Detail
ChrX:102623468 Ftx within coordinates of
Rr6306 within coordinates of
SNP A/G G G G G G G A G G G G G G G G
rs31825084
MGI SNP Detail
ChrX:102623501 Ftx within coordinates of
Rr6306 within coordinates of
SNP A/G A A A A A A G A A A A A A A A
rs250788734
MGI SNP Detail
ChrX:102623556 Ftx within coordinates of
Rr6306 43 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217214366
MGI SNP Detail
ChrX:102623565 Ftx within coordinates of
Rr6306 52 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs31824323
MGI SNP Detail
ChrX:102623588 Ftx within coordinates of
Rr6306 75 bp distal
SNP C/T C C C C C C T C C C C C C C C
rs264454528
MGI SNP Detail
ChrX:102623701 Ftx within coordinates of
Rr6306 188 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29081618
MGI SNP Detail
ChrX:102623714 Ftx within coordinates of
Rr6306 201 bp distal
SNP A/C A A C A A A C C A A C A A C A
rs231035255
MGI SNP Detail
ChrX:102623727 Ftx within coordinates of
Rr6306 214 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs583368902
MGI SNP Detail
ChrX:102623737 Ftx within coordinates of
Rr6306 224 bp distal
SNP A/C/G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G G G G G G G G G G G G G G C G G G
rs249856125
MGI SNP Detail
ChrX:102623832 Ftx within coordinates of
Rr6306 319 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220090315
MGI SNP Detail
ChrX:102623833 Ftx within coordinates of
Rr6306 320 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs245645705
MGI SNP Detail
ChrX:102623837 Ftx within coordinates of
Rr6306 324 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs29081617
MGI SNP Detail
ChrX:102623844 Ftx within coordinates of
Rr6306 331 bp distal
SNP A/T A A A A A A A A A T A A T A
rs223832086
MGI SNP Detail
ChrX:102623879 Ftx within coordinates of
Rr6306 366 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs248039643
MGI SNP Detail
ChrX:102623910 Ftx within coordinates of
Rr6306 397 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29081616
MGI SNP Detail
ChrX:102623986 Ftx within coordinates of
Rr6306 473 bp distal
SNP C/T C C C C C C C C C C T C C T C
rs29081615
MGI SNP Detail
ChrX:102624114 Ftx within coordinates of
Rr6306 601 bp distal
SNP A/G G G G G G G G G G G A G G A G
rs235774788
MGI SNP Detail
ChrX:102624200 Ftx within coordinates of
Rr6306 687 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs256108979
MGI SNP Detail
ChrX:102624378 Ftx within coordinates of
Rr6306 865 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs231086170
MGI SNP Detail
ChrX:102624424 Ftx within coordinates of
Rr6306 911 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs255539376
MGI SNP Detail
ChrX:102624449 Ftx within coordinates of
Rr6306 936 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs263716113
MGI SNP Detail
ChrX:102624476 Ftx within coordinates of
Rr6306 963 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs232265960
MGI SNP Detail
ChrX:102624482 Ftx within coordinates of
Rr6306 969 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C C C C A C C C C C C C A C C C C
rs29081614
MGI SNP Detail
ChrX:102624631 Ftx within coordinates of
Rr6306 1118 bp distal
SNP A/G G G G G G G A G G G G G G G G
rs217026034
MGI SNP Detail
ChrX:102624734 Ftx within coordinates of
Rr6306 1221 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs31824322
MGI SNP Detail
ChrX:102624985 Ftx within coordinates of
Rr6306 1472 bp distal
SNP C/G C C C C G C C C C
rs243787369
MGI SNP Detail
ChrX:102625171 Ftx within coordinates of
Rr6306 1658 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs214623304
MGI SNP Detail
ChrX:102625257 Ftx within coordinates of
Rr6306 1744 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs31824321
MGI SNP Detail
ChrX:102625292 Ftx within coordinates of
Rr6306 1779 bp distal
SNP C/T C C C C C C T C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs31824320
MGI SNP Detail
ChrX:102625374 Ftx within coordinates of
Rr6306 1861 bp distal
SNP C/G C C C C C C G C C C C C C C C
rs29081163
MGI SNP Detail
ChrX:102625393 Ftx within coordinates of
Rr6306 1880 bp distal
SNP A/G G G G G G G G G G G A G G A G
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Showing SNP(s) 1 - 77 of 77

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory

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