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Mouse SNP Summary
Symbol
Name
ID 		Rr89360
regulatory region 89360
MGI:6977582

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Showing SNP(s) 1 - 58 of 58

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs257076809
MGI SNP Detail		 Chr4:48178612 Rr89360 1989 bp proximal
Stx17 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228022048
MGI SNP Detail		 Chr4:48178668 Rr89360 1933 bp proximal
Stx17 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs255940632
MGI SNP Detail		 Chr4:48178838 Rr89360 1763 bp proximal
Stx17 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs213511814
MGI SNP Detail		 Chr4:48178915 Rr89360 1686 bp proximal
Stx17 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs240556218
MGI SNP Detail		 Chr4:48178924 Rr89360 1677 bp proximal
Stx17 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs245004305
MGI SNP Detail		 Chr4:48178971 Rr89360 1630 bp proximal
Stx17 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs217299592
MGI SNP Detail		 Chr4:48178979 Rr89360 1622 bp proximal
Stx17 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs31767249
MGI SNP Detail		 Chr4:48179231 Rr89360 1370 bp proximal
Stx17 within coordinates of
 SNP A/G A A G G A G
rs265952324
MGI SNP Detail		 Chr4:48179239 Rr89360 1362 bp proximal
Stx17 within coordinates of
 SNP A/T T A
rs211891089
MGI SNP Detail		 Chr4:48179244 Rr89360 1357 bp proximal
Stx17 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs27783175
MGI SNP Detail		 Chr4:48179360 Rr89360 1241 bp proximal
Stx17 within coordinates of
 SNP C/T C C T C C C T C C C T T C C T C C
rs262526850
MGI SNP Detail		 Chr4:48179402 Rr89360 1199 bp proximal
Stx17 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs222778125
MGI SNP Detail		 Chr4:48179550 Rr89360 1051 bp proximal
Stx17 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249173875
MGI SNP Detail		 Chr4:48179636 Rr89360 965 bp proximal
Stx17 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs252973021
MGI SNP Detail		 Chr4:48179709 Rr89360 892 bp proximal
Stx17 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs223800482
MGI SNP Detail		 Chr4:48179718 Rr89360 883 bp proximal
Stx17 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs32807687
MGI SNP Detail		 Chr4:48179730 Rr89360 871 bp proximal
Stx17 within coordinates of
 SNP A/G A A G G G
rs31878416
MGI SNP Detail		 Chr4:48179732 Rr89360 869 bp proximal
Stx17 within coordinates of
 SNP A/G A A G A A
rs228574047
MGI SNP Detail		 Chr4:48179803 Rr89360 798 bp proximal
Stx17 within coordinates of
 SNP C/G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T C T T T G
rs244502927
MGI SNP Detail		 Chr4:48179931 Rr89360 670 bp proximal
Stx17 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs265006252
MGI SNP Detail		 Chr4:48179952 Rr89360 649 bp proximal
Stx17 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27783174
MGI SNP Detail		 Chr4:48179954 Rr89360 647 bp proximal
Stx17 within coordinates of
 SNP A/G A A G A A A G A A A G G A A G A A
rs244969021
MGI SNP Detail		 Chr4:48179974 Rr89360 627 bp proximal
Stx17 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27783173
MGI SNP Detail		 Chr4:48180111 Rr89360 490 bp proximal
Stx17 within coordinates of
 SNP A/G A G G G G G G G G G G A G G
rs27783172
MGI SNP Detail		 Chr4:48180138 Rr89360 463 bp proximal
Stx17 within coordinates of
 SNP C/T C C T C T T T T C T T T C C T C C T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs243020477
MGI SNP Detail		 Chr4:48180140 Rr89360 461 bp proximal
Stx17 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs212035622
MGI SNP Detail		 Chr4:48180211 Rr89360 390 bp proximal
Stx17 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238908031
MGI SNP Detail		 Chr4:48180345 Rr89360 256 bp proximal
Stx17 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs256991428
MGI SNP Detail		 Chr4:48180970 Rr104912 within coordinates of
Rr89360 within coordinates of
Stx17 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27783171
MGI SNP Detail		 Chr4:48181072 Rr104912 within coordinates of
Rr89360 72 bp distal
Stx17 within coordinates of
 SNP C/T C C T C C C T C C C T T C C T C C
rs235003606
MGI SNP Detail		 Chr4:48181083 Rr104912 within coordinates of
Rr89360 83 bp distal
Stx17 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs253035365
MGI SNP Detail		 Chr4:48181088 Rr104912 within coordinates of
Rr89360 88 bp distal
Stx17 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs223489097
MGI SNP Detail		 Chr4:48181116 Rr104912 within coordinates of
Rr89360 116 bp distal
Stx17 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242092557
MGI SNP Detail		 Chr4:48181118 Rr104912 within coordinates of
Rr89360 118 bp distal
Stx17 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs250795994
MGI SNP Detail		 Chr4:48181154 Rr104912 within coordinates of
Rr89360 154 bp distal
Stx17 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220952539
MGI SNP Detail		 Chr4:48181181 Rr104912 within coordinates of
Rr89360 181 bp distal
Stx17 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs27783170
MGI SNP Detail		 Chr4:48181259 Rr104912 within coordinates of
Rr89360 259 bp distal
Stx17 within coordinates of
 SNP A/C C C A C C A C C C A A C C A C C
rs262534084
MGI SNP Detail		 Chr4:48181288 Rr104912 within coordinates of
Rr89360 288 bp distal
Stx17 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215441010
MGI SNP Detail		 Chr4:48181391 Rr104912 within coordinates of
Rr89360 391 bp distal
Stx17 within coordinates of
 SNP C/G C G
rs27783169
MGI SNP Detail		 Chr4:48181579 Rr104912 within coordinates of
Rr89360 579 bp distal
Stx17 within coordinates of
 SNP C/T C C T C C C T C C C T T C C T C C
rs259651160
MGI SNP Detail		 Chr4:48181627 Rr104912 within coordinates of
Rr89360 627 bp distal
Stx17 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227962532
MGI SNP Detail		 Chr4:48181829 Rr104912 within coordinates of
Rr89360 829 bp distal
Stx17 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27783168
MGI SNP Detail		 Chr4:48182025 Rr104912 within coordinates of
Rr89360 1025 bp distal
Stx17 within coordinates of
 SNP A/G G G G G G G G G G G G G G A G
rs212176573
MGI SNP Detail		 Chr4:48182040 Rr104912 within coordinates of
Rr89360 1040 bp distal
Stx17 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs230919849
MGI SNP Detail		 Chr4:48182071 Rr104912 within coordinates of
Rr89360 1071 bp distal
Stx17 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs255077633
MGI SNP Detail		 Chr4:48182299 Rr89360 1299 bp distal
Stx17 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27871445
MGI SNP Detail		 Chr4:48182384 Rr89360 1384 bp distal
Stx17 within coordinates of
 SNP A/T T T A T T T A T T T A A T T A T T
rs233765563
MGI SNP Detail		 Chr4:48182501 Rr89360 1501 bp distal
Stx17 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27871444
MGI SNP Detail		 Chr4:48182519 Rr89360 1519 bp distal
Stx17 within coordinates of
 SNP A/G A A A A G A A A G G A A A A
rs27871443
MGI SNP Detail		 Chr4:48182595 Rr89360 1595 bp distal
Stx17 within coordinates of
 SNP C/T T T T T T T T T T T T C T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs235579035
MGI SNP Detail		 Chr4:48182599 Rr89360 1599 bp distal
Stx17 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27871442
MGI SNP Detail		 Chr4:48182822 Rr89360 1822 bp distal
Stx17 within coordinates of
 SNP A/G G G A G G G A G G G A A G G A G G
rs220539927
MGI SNP Detail		 Chr4:48182837 Rr89360 1837 bp distal
Stx17 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237353342
MGI SNP Detail		 Chr4:48182853 Rr89360 1853 bp distal
Stx17 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs262212549
MGI SNP Detail		 Chr4:48182862 Rr89360 1862 bp distal
Stx17 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs248579831
MGI SNP Detail		 Chr4:48182887 Rr89360 1887 bp distal
Stx17 within coordinates of
 SNP C/T T C
rs219360666
MGI SNP Detail		 Chr4:48182889 Rr89360 1889 bp distal
Stx17 within coordinates of
 SNP A/C A C
rs27871441
MGI SNP Detail		 Chr4:48182957 Rr89360 1957 bp distal
Stx17 within coordinates of
 SNP C/T C C T C C C T C C C T T C C T C C
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Showing SNP(s) 1 - 58 of 58
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory