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Mouse SNP Summary
Symbol
Name
ID 		Rr180860
regulatory region 180860
MGI:7069082

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Showing SNP(s) 1 - 69 of 69

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs263052255
MGI SNP Detail		 Chr8:3556263 Mcoln1 within coordinates of
Rr180860 1938 bp proximal
 SNP C/T T T T C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C T C C C T C C C C C C C C C C C C
rs232852982
MGI SNP Detail		 Chr8:3556411 Mcoln1 within coordinates of
Rr180860 1790 bp proximal
 SNP C/G G G G C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C C C C G C C C G C C C C C C C C C C C C
rs253793885
MGI SNP Detail		 Chr8:3556445 Mcoln1 within coordinates of
Rr180860 1756 bp proximal
 SNP A/G G G G A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A G A A A G A A A A A A A G A A A A
rs266115329
MGI SNP Detail		 Chr8:3556449 Mcoln1 within coordinates of
Rr180860 1752 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs227601440
MGI SNP Detail		 Chr8:3556564 Mcoln1 within coordinates of
Rr180860 1637 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs243003481
MGI SNP Detail		 Chr8:3556574 Mcoln1 within coordinates of
Rr180860 1627 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs213627565
MGI SNP Detail		 Chr8:3556578 Mcoln1 within coordinates of
Rr180860 1623 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs232169384
MGI SNP Detail		 Chr8:3556629 Mcoln1 within coordinates of
Rr180860 1572 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs245353219
MGI SNP Detail		 Chr8:3556656 Mcoln1 within coordinates of
Rr180860 1545 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs216893060
MGI SNP Detail		 Chr8:3556749 Mcoln1 within coordinates of
Rr180860 1452 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs32942622
MGI SNP Detail		 Chr8:3556854 Mcoln1 within coordinates of
Rr180860 1347 bp proximal
 SNP C/T T T C C C
rs261098371
MGI SNP Detail		 Chr8:3556880 Mcoln1 within coordinates of
Rr180860 1321 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220377133
MGI SNP Detail		 Chr8:3556950 Mcoln1 within coordinates of
Rr180860 1251 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs231009935
MGI SNP Detail		 Chr8:3556965 Mcoln1 within coordinates of
Rr180860 1236 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251523584
MGI SNP Detail		 Chr8:3556989 Mcoln1 within coordinates of
Rr180860 1212 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs220654959
MGI SNP Detail		 Chr8:3557040 Mcoln1 within coordinates of
Rr180860 1161 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G
rs32978580
MGI SNP Detail		 Chr8:3557083 Mcoln1 within coordinates of
Rr180860 1118 bp proximal
 SNP C/T C C T T
rs265427180
MGI SNP Detail		 Chr8:3557368 Mcoln1 within coordinates of
Rr180860 833 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs224746845
MGI SNP Detail		 Chr8:3557482 Mcoln1 within coordinates of
Rr180860 719 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs249911525
MGI SNP Detail		 Chr8:3557623 Mcoln1 within coordinates of
Rr180860 578 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs264310666
MGI SNP Detail		 Chr8:3557684 Mcoln1 within coordinates of
Rr180860 517 bp proximal
 SNP G/T G G G T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T T T T G T T T G T T T T T T T T T T T T
rs223344782
MGI SNP Detail		 Chr8:3557698 Mcoln1 within coordinates of
Rr180860 503 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs583336505
MGI SNP Detail		 Chr8:3557750 Mcoln1 within coordinates of
Rr180860 451 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs586426827
MGI SNP Detail		 Chr8:3557752 Mcoln1 within coordinates of
Rr180860 449 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs242975903
MGI SNP Detail		 Chr8:3557764 Mcoln1 within coordinates of
Rr180860 437 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs255325319
MGI SNP Detail		 Chr8:3557864 Mcoln1 within coordinates of
Rr180860 337 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs226085389
MGI SNP Detail		 Chr8:3557876 Mcoln1 within coordinates of
Rr180860 325 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs252324776
MGI SNP Detail		 Chr8:3557879 Mcoln1 within coordinates of
Rr180860 322 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs217324626
MGI SNP Detail		 Chr8:3557901 Mcoln1 within coordinates of
Rr180860 300 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33895697
MGI SNP Detail		 Chr8:3557926 Mcoln1 within coordinates of
Rr180860 275 bp proximal
 SNP A/G A G
rs581149009
MGI SNP Detail		 Chr8:3557933 Mcoln1 within coordinates of
Rr180860 268 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs584242593
MGI SNP Detail		 Chr8:3557985 Mcoln1 within coordinates of
Rr180860 216 bp proximal
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs260346710
MGI SNP Detail		 Chr8:3558082 Mcoln1 within coordinates of
Rr180860 119 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs32701382
MGI SNP Detail		 Chr8:3558176 Mcoln1 within coordinates of
Rr180860 25 bp proximal
 SNP A/C C A A A A A A C A A A A A A C A
rs46322104
MGI SNP Detail		 Chr8:3558187 Mcoln1 within coordinates of
Rr180860 14 bp proximal
 SNP C/T C C C C C C C C C C C C C T C
rs251493841
MGI SNP Detail		 Chr8:3558191 Mcoln1 within coordinates of
Rr180860 10 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32845873
MGI SNP Detail		 Chr8:3558253 Mcoln1 within coordinates of
Rr180860 within coordinates of
 SNP G/T T G G G
rs234399423
MGI SNP Detail		 Chr8:3558255 Mcoln1 within coordinates of
Rr180860 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258320488
MGI SNP Detail		 Chr8:3558265 Mcoln1 within coordinates of
Rr180860 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs224719715
MGI SNP Detail		 Chr8:3558307 Mcoln1 within coordinates of
Rr180860 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs49752738
MGI SNP Detail		 Chr8:3558315 Mcoln1 within coordinates of
Rr180860 within coordinates of
 SNP A/G G G G G G G A G G G G G G G G
rs264068874
MGI SNP Detail		 Chr8:3558380 Mcoln1 within coordinates of
Rr180860 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217786099
MGI SNP Detail		 Chr8:3558390 Mcoln1 within coordinates of
Rr180860 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs13463014
MGI SNP Detail		 Chr8:3558393 Mcoln1 within coordinates of
Rr180860 within coordinates of
 SNP A/G A G G G G G G A G G G G G G A G
rs32810417
MGI SNP Detail		 Chr8:3558468 Mcoln1 within coordinates of
Rr180860 68 bp distal
 SNP A/G A G G G
rs226047757
MGI SNP Detail		 Chr8:3558520 Mcoln1 within coordinates of
Rr180860 120 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs247714093
MGI SNP Detail		 Chr8:3558582 Mcoln1 within coordinates of
Rr180860 182 bp distal
 SNP A/G G G G A A A A A A A A A A A A A A A A G A A G A A A A G A G A A A A A A G G G A G A A A A A A A G A A G G
rs45964826
MGI SNP Detail		 Chr8:3558777 Mcoln1 within coordinates of
Rr180860 377 bp distal
 SNP C/T C C C C C C T C C C C C C C C
rs234127623
MGI SNP Detail		 Chr8:3558944 Mcoln1 within coordinates of
Rr180860 544 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254799966
MGI SNP Detail		 Chr8:3558962 Mcoln1 within coordinates of
Rr180860 562 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs50936928
MGI SNP Detail		 Chr8:3558988 Mcoln1 within coordinates of
Rr180860 588 bp distal
 SNP A/G G G G G G G A G G G G G G G G
rs225175131
MGI SNP Detail		 Chr8:3559006 Mcoln1 within coordinates of
Rr180860 606 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs245252184
MGI SNP Detail		 Chr8:3559017 Mcoln1 within coordinates of
Rr180860 617 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs214710955
MGI SNP Detail		 Chr8:3559332 Mcoln1 within coordinates of
Rr180860 932 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs234258422
MGI SNP Detail		 Chr8:3559455 Mcoln1 within coordinates of
Rr180860 1055 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs32778410
MGI SNP Detail		 Chr8:3559497 Gm63958 within coordinates of
Mcoln1 within coordinates of
Rr180860 1097 bp distal
 SNP A/G A G G G
rs33055209
MGI SNP Detail		 Chr8:3559542 Gm63958 within coordinates of
Mcoln1 within coordinates of
Rr180860 1142 bp distal
 SNP A/G G A A A
rs241657882
MGI SNP Detail		 Chr8:3559602 Gm63958 within coordinates of
Mcoln1 within coordinates of
Rr180860 1202 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs260656209
MGI SNP Detail		 Chr8:3559638 Gm63958 within coordinates of
Mcoln1 within coordinates of
Rr180860 1238 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217752775
MGI SNP Detail		 Chr8:3559696 Gm63958 within coordinates of
Mcoln1 within coordinates of
Rr180860 1296 bp distal
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs236502682
MGI SNP Detail		 Chr8:3559699 Gm63958 within coordinates of
Mcoln1 within coordinates of
Rr180860 1299 bp distal
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs249478443
MGI SNP Detail		 Chr8:3559756 Gm63958 within coordinates of
Mcoln1 within coordinates of
Rr180860 1356 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33521727
MGI SNP Detail		 Chr8:3559801 Gm63958 within coordinates of
Mcoln1 within coordinates of
Rr180860 1401 bp distal
 SNP A/G A G G G A G G G G A G
rs33409753
MGI SNP Detail		 Chr8:3559891 Gm63958 within coordinates of
Mcoln1 within coordinates of
Rr180860 1491 bp distal
 SNP C/T C T T T
rs47364705
MGI SNP Detail		 Chr8:3559932 Gm63958 within coordinates of
Mcoln1 within coordinates of
Rr180860 1532 bp distal
 SNP A/G A G G G G G G G G G G G G G G
rs233122679
MGI SNP Detail		 Chr8:3559982 Gm63958 within coordinates of
Mcoln1 within coordinates of
Rr180860 1582 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs251394706
MGI SNP Detail		 Chr8:3559985 Gm63958 within coordinates of
Mcoln1 within coordinates of
Rr180860 1585 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256140127
MGI SNP Detail		 Chr8:3560024 Gm63958 within coordinates of
Mcoln1 within coordinates of
Rr180860 1624 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs225143035
MGI SNP Detail		 Chr8:3560300 Gm63958 within coordinates of
Mcoln1 within coordinates of
Rr180860 1900 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
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Showing SNP(s) 1 - 69 of 69
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory