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Mouse SNP Summary
Symbol
Name
ID 		Rr196313
regulatory region 196313
MGI:7084535

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Showing SNP(s) 1 - 84 of 84

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs33758044
MGI SNP Detail		 Chr9:62318710 Rr196313 1891 bp proximal
 SNP C/T T T C T C C C C T C
rs29644083
MGI SNP Detail		 Chr9:62318775 Rr196313 1826 bp proximal
 SNP A/G G G G A A G G A G G G G G G G
rs263907823
MGI SNP Detail		 Chr9:62318806 Rr196313 1795 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29993189
MGI SNP Detail		 Chr9:62318821 Rr196313 1780 bp proximal
 SNP A/G A A A A G G A
rs39211241
MGI SNP Detail		 Chr9:62318854 Rr196313 1747 bp proximal
 SNP A/G A A A A A G A A
rs38269083
MGI SNP Detail		 Chr9:62318928 Rr196313 1673 bp proximal
 SNP A/G G G G A G
rs37554930
MGI SNP Detail		 Chr9:62318939 Rr196313 1662 bp proximal
 SNP A/T T T T T A T T T
rs244163546
MGI SNP Detail		 Chr9:62319068 Rr196313 1533 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215676003
MGI SNP Detail		 Chr9:62319116 Rr196313 1485 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs234946777
MGI SNP Detail		 Chr9:62319147 Rr196313 1454 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30195497
MGI SNP Detail		 Chr9:62319163 Rr196313 1438 bp proximal
 SNP A/G G G G A A G
rs38761527
MGI SNP Detail		 Chr9:62319190 Rr196313 1411 bp proximal
 SNP A/G G G G G G A G G G
rs236522215
MGI SNP Detail		 Chr9:62319214 Rr196313 1387 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239220928
MGI SNP Detail		 Chr9:62319339 Rr196313 1262 bp proximal
 SNP C/T T C
rs221911383
MGI SNP Detail		 Chr9:62319350 Rr196313 1251 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs37083958
MGI SNP Detail		 Chr9:62319352 Rr196313 1249 bp proximal
 SNP G/T T T T T T G T T T
rs51507417
MGI SNP Detail		 Chr9:62319368 Rr196313 1233 bp proximal
 SNP G G G G
rs29638705
MGI SNP Detail		 Chr9:62319411 Rr196313 1190 bp proximal
Rr201157 within coordinates of
 SNP C/T T C T T T
rs30441292
MGI SNP Detail		 Chr9:62319428 Rr196313 1173 bp proximal
Rr201157 within coordinates of
 SNP A/G G A G G
rs30336555
MGI SNP Detail		 Chr9:62319445 Rr196313 1156 bp proximal
Rr201157 within coordinates of
 SNP C/T T T C C C T T T T
rs29593968
MGI SNP Detail		 Chr9:62319502 Rr196313 1099 bp proximal
Rr201157 within coordinates of
 SNP A/T A T A A A
rs37907023
MGI SNP Detail		 Chr9:62319615 Rr196313 986 bp proximal
Rr201157 within coordinates of
 SNP C/T C C T T C C C C C
rs36883225
MGI SNP Detail		 Chr9:62319676 Rr196313 925 bp proximal
Rr201157 within coordinates of
 SNP C/T C C T T C C C C C
rs36628292
MGI SNP Detail		 Chr9:62319703 Rr196313 898 bp proximal
Rr201157 within coordinates of
 SNP C/G G G C
rs224902733
MGI SNP Detail		 Chr9:62319753 Rr196313 848 bp proximal
Rr201157 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs49354660
MGI SNP Detail		 Chr9:62319843 Rr196313 758 bp proximal
 SNP A/G G G G A
rs48209734
MGI SNP Detail		 Chr9:62319862 Rr196313 739 bp proximal
 SNP C C C C C C
rs49239935
MGI SNP Detail		 Chr9:62319955 Rr196313 646 bp proximal
 SNP G G G G G G
rs29836029
MGI SNP Detail		 Chr9:62319984 Rr196313 617 bp proximal
 SNP A/G G A G
rs50592991
MGI SNP Detail		 Chr9:62319997 Rr196313 604 bp proximal
 SNP T T T T T T
rs30226386
MGI SNP Detail		 Chr9:62320014 Rr196313 587 bp proximal
 SNP C/G C C G G C
rs47800814
MGI SNP Detail		 Chr9:62320093 Rr196313 508 bp proximal
 SNP G G G G G G
rs38627367
MGI SNP Detail		 Chr9:62320132 Rr196313 469 bp proximal
 SNP A/G A A A G A A A A A A A
rs48812606
MGI SNP Detail		 Chr9:62320151 Rr196313 450 bp proximal
 SNP A A A A
rs37686983
MGI SNP Detail		 Chr9:62320262 Rr196313 339 bp proximal
 SNP A/G A A A G G A A A A A
rs50129251
MGI SNP Detail		 Chr9:62320276 Rr196313 325 bp proximal
 SNP T T T T T T
rs30292749
MGI SNP Detail		 Chr9:62320304 Rr196313 297 bp proximal
 SNP A/G A A G G A
rs39271769
MGI SNP Detail		 Chr9:62320324 Rr196313 277 bp proximal
 SNP C/T C C C T T C C C C C
rs39792630
MGI SNP Detail		 Chr9:62320361 Rr196313 240 bp proximal
 SNP A/G A A A G G A A A A A A
rs49920711
MGI SNP Detail		 Chr9:62320384 Rr196313 217 bp proximal
 SNP A A A A A A
rs37584107
MGI SNP Detail		 Chr9:62320387 Rr196313 214 bp proximal
 SNP C/T T T C C T T T T T
rs36666480
MGI SNP Detail		 Chr9:62320431 Rr196313 170 bp proximal
 SNP A/G G G G A A G G G G G
rs219216803
MGI SNP Detail		 Chr9:62320451 Rr196313 150 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs46788896
MGI SNP Detail		 Chr9:62320505 Rr196313 96 bp proximal
 SNP A A A A A A
rs49773486
MGI SNP Detail		 Chr9:62320528 Rr196313 73 bp proximal
 SNP A A A A
rs50338061
MGI SNP Detail		 Chr9:62320533 Rr196313 68 bp proximal
 SNP T T T T
rs229456269
MGI SNP Detail		 Chr9:62320640 Rr196313 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs49796889
MGI SNP Detail		 Chr9:62320653 Rr196313 within coordinates of
 SNP T T T T T
rs36705601
MGI SNP Detail		 Chr9:62320775 Rr196313 within coordinates of
 SNP A/G G G G A A G G G G G G
rs231918224
MGI SNP Detail		 Chr9:62320852 Rr196313 52 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs251702080
MGI SNP Detail		 Chr9:62320890 Rr196313 90 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212294332
MGI SNP Detail		 Chr9:62320904 Rr196313 104 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs235537548
MGI SNP Detail		 Chr9:62320909 Rr196313 109 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs36754376
MGI SNP Detail		 Chr9:62320912 Rr196313 112 bp distal
 SNP A/T T T T A A T A T T T T
rs222711830
MGI SNP Detail		 Chr9:62320970 Rr196313 170 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs48980009
MGI SNP Detail		 Chr9:62320972 Rr196313 172 bp distal
 SNP C C C C C C
rs251805070
MGI SNP Detail		 Chr9:62320995 Rr196313 195 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs219277310
MGI SNP Detail		 Chr9:62320998 Rr196313 198 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs47752660
MGI SNP Detail		 Chr9:62321016 Rr196313 216 bp distal
 SNP T T T T T
rs261341427
MGI SNP Detail		 Chr9:62321021 Rr196313 221 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs39180403
MGI SNP Detail		 Chr9:62321082 Rr196313 282 bp distal
 SNP C/G C C C G G C C C C C
rs247015645
MGI SNP Detail		 Chr9:62321104 Rr196313 304 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs252805292
MGI SNP Detail		 Chr9:62321239 Rr196313 439 bp distal
Rr196314 within coordinates of
 SNP C/T C T
rs222494522
MGI SNP Detail		 Chr9:62321241 Rr196313 441 bp distal
Rr196314 within coordinates of
 SNP C/T C T
rs260932866
MGI SNP Detail		 Chr9:62321383 Rr196313 583 bp distal
Rr196314 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229598346
MGI SNP Detail		 Chr9:62321521 Rr196313 721 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29987310
MGI SNP Detail		 Chr9:62321526 Rr196313 726 bp distal
 SNP A/G G A G A A G
rs260148435
MGI SNP Detail		 Chr9:62321549 Rr196313 749 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs29790683
MGI SNP Detail		 Chr9:62321586 Rr196313 786 bp distal
 SNP A/C C A C A A C
rs33705686
MGI SNP Detail		 Chr9:62321625 Gm40523 within coordinates of
Rr196313 825 bp distal
 SNP C/G G G C G G C C C G G
rs237337489
MGI SNP Detail		 Chr9:62321688 Gm40523 within coordinates of
Rr196313 888 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254024366
MGI SNP Detail		 Chr9:62321691 Gm40523 within coordinates of
Rr196313 891 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29941095
MGI SNP Detail		 Chr9:62321892 Gm40523 within coordinates of
Rr196313 1092 bp distal
 SNP G/T G G T G G T G
rs29592260
MGI SNP Detail		 Chr9:62321978 Gm40523 within coordinates of
Rr1154 within coordinates of
Rr196313 1178 bp distal
 SNP C/T C C T C C T T T C C C
rs251938837
MGI SNP Detail		 Chr9:62322039 Gm40523 within coordinates of
Rr1154 within coordinates of
Rr196313 1239 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs30429922
MGI SNP Detail		 Chr9:62322048 Gm40523 within coordinates of
Rr1154 within coordinates of
Rr196313 1248 bp distal
 SNP C/G C C G C C C
rs236909995
MGI SNP Detail		 Chr9:62322049 Gm40523 within coordinates of
Rr1154 within coordinates of
Rr196313 1249 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs30192955
MGI SNP Detail		 Chr9:62322088 Gm40523 within coordinates of
Rr1154 within coordinates of
Rr196313 1288 bp distal
 SNP C/T C T C T T C
rs221259492
MGI SNP Detail		 Chr9:62322326 Gm40523 within coordinates of
Rr1154 within coordinates of
Rr196313 1526 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs249737976
MGI SNP Detail		 Chr9:62322409 Gm40523 within coordinates of
Rr1154 within coordinates of
Rr196313 1609 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs38719949
MGI SNP Detail		 Chr9:62322423 Gm40523 within coordinates of
Rr1154 within coordinates of
Rr196313 1623 bp distal
 SNP C/T T T C C C T T
rs220726293
MGI SNP Detail		 Chr9:62322458 Gm40523 within coordinates of
Rr1154 within coordinates of
Rr196313 1658 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240853175
MGI SNP Detail		 Chr9:62322527 Gm40523 within coordinates of
Rr1154 within coordinates of
Rr196313 1727 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260318310
MGI SNP Detail		 Chr9:62322577 Gm40523 within coordinates of
Rr1154 within coordinates of
Rr196313 1777 bp distal
 SNP G/T T T T G T T T T T T G G T T T T T T T T T G T T T G T T T T T T T G T T G G G T T T T G T G T T T G T
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Showing SNP(s) 1 - 84 of 84
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory