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Mouse SNP Summary
Symbol
Name
ID 		Rr223960
regulatory region 223960
MGI:7112182

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Showing SNP(s) 1 - 53 of 53

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs583227258
MGI SNP Detail		 Chr10:92896040 Cfap54 within coordinates of
Rr223960 within coordinates of
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs387676419
MGI SNP Detail		 Chr10:92896432 Cfap54 within coordinates of
Rr223960 within coordinates of
 SNP C C C C C C C C C C
rs233133718
MGI SNP Detail		 Chr10:92896471 Cfap54 within coordinates of
Rr223960 3 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33881156
MGI SNP Detail		 Chr10:92896617 Cfap54 within coordinates of
Rr223960 149 bp distal
 SNP A/G A G A A A
rs258189945
MGI SNP Detail		 Chr10:92896662 Cfap54 within coordinates of
Rr223960 194 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs51326673
MGI SNP Detail		 Chr10:92896715 Cfap54 within coordinates of
Rr223960 247 bp distal
 SNP A/C C A A A A A A A A A A A C A A
rs244726928
MGI SNP Detail		 Chr10:92896732 Cfap54 within coordinates of
Rr223960 264 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs213883866
MGI SNP Detail		 Chr10:92896776 Cfap54 within coordinates of
Rr223960 308 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs237458311
MGI SNP Detail		 Chr10:92896798 Cfap54 within coordinates of
Rr223960 330 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G
rs249399632
MGI SNP Detail		 Chr10:92896819 Cfap54 within coordinates of
Rr223960 351 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs579435136
MGI SNP Detail		 Chr10:92896832 Cfap54 within coordinates of
Rr223960 364 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs219560608
MGI SNP Detail		 Chr10:92896865 Cfap54 within coordinates of
Rr223960 397 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs51468860
MGI SNP Detail		 Chr10:92896897 Cfap54 within coordinates of
Rr223960 429 bp distal
 SNP C/G C C C C C C C C C C C C C C G C C
rs253267309
MGI SNP Detail		 Chr10:92896900 Cfap54 within coordinates of
Rr223960 432 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs108750924
MGI SNP Detail		 Chr10:92896965 Cfap54 within coordinates of
Rr223960 497 bp distal
 SNP C C C
rs108237246
MGI SNP Detail		 Chr10:92896974 Cfap54 within coordinates of
Rr223960 506 bp distal
 SNP C C C
rs232475653
MGI SNP Detail		 Chr10:92897095 Cfap54 within coordinates of
Rr217502 within coordinates of
Rr223960 627 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs108003168
MGI SNP Detail		 Chr10:92897126 Cfap54 within coordinates of
Rr217502 within coordinates of
Rr223960 658 bp distal
 SNP T T T T T
rs48313054
MGI SNP Detail		 Chr10:92897208 Cfap54 within coordinates of
Rr223960 740 bp distal
 SNP A/G G G G G G G A G G G A G G A A
rs243828289
MGI SNP Detail		 Chr10:92897263 Cfap54 within coordinates of
Rr223960 795 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264388943
MGI SNP Detail		 Chr10:92897297 Cfap54 within coordinates of
Rr223960 829 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs49985027
MGI SNP Detail		 Chr10:92897477 Cfap54 within coordinates of
Rr223960 1009 bp distal
 SNP G G G G G
rs50225181
MGI SNP Detail		 Chr10:92897509 Cfap54 within coordinates of
Rr223960 1041 bp distal
 SNP A/G G G G G G G G A G G G G A G G A G A
rs46497746
MGI SNP Detail		 Chr10:92897554 Cfap54 within coordinates of
Rr223960 1086 bp distal
 SNP A A A A A
rs50855671
MGI SNP Detail		 Chr10:92897571 Cfap54 within coordinates of
Rr223960 1103 bp distal
 SNP C/T C C C C C T C C T T C T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs51463336
MGI SNP Detail		 Chr10:92897592 Cfap54 within coordinates of
Rr223960 1124 bp distal
 SNP A A A A A
rs255579559
MGI SNP Detail		 Chr10:92897604 Cfap54 within coordinates of
Rr223960 1136 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs46532193
MGI SNP Detail		 Chr10:92897661 Cfap54 within coordinates of
Rr223960 1193 bp distal
 SNP A/G G G G A G G G G A
rs51584877
MGI SNP Detail		 Chr10:92897675 Cfap54 within coordinates of
Rr223960 1207 bp distal
 SNP G G G G G G
rs50031834
MGI SNP Detail		 Chr10:92897681 Cfap54 within coordinates of
Rr223960 1213 bp distal
 SNP C C C C C C
rs46354145
MGI SNP Detail		 Chr10:92897704 Cfap54 within coordinates of
Rr223960 1236 bp distal
 SNP C/T T T T T T T T C T T T T C T T C T C
rs247626698
MGI SNP Detail		 Chr10:92897748 Cfap54 within coordinates of
Rr223960 1280 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs49856468
MGI SNP Detail		 Chr10:92897782 Cfap54 within coordinates of
Rr223960 1314 bp distal
 SNP A/T A A A A A A A A A A A A A A A T A A
rs48473921
MGI SNP Detail		 Chr10:92897835 Cfap54 within coordinates of
Rr223960 1367 bp distal
 SNP A A A A A
rs45688955
MGI SNP Detail		 Chr10:92897906 Cfap54 within coordinates of
Rr223960 1438 bp distal
 SNP C/T C C C C C C C T C C C C T C C T C T
rs50582976
MGI SNP Detail		 Chr10:92897978 Cfap54 within coordinates of
Rr223960 1510 bp distal
 SNP C/T C C C C C C C T C C C C T C C T C T
rs47353439
MGI SNP Detail		 Chr10:92898008 Cfap54 within coordinates of
Rr223960 1540 bp distal
 SNP C/T T T T T T T T C T T T T C T T C T C
rs45941899
MGI SNP Detail		 Chr10:92898021 Cfap54 within coordinates of
Rr223960 1553 bp distal
 SNP A/G A A A A A A G A A A G A A A G
rs253491182
MGI SNP Detail		 Chr10:92898035 Cfap54 within coordinates of
Rr223960 1567 bp distal
 SNP C/T C T
rs47237489
MGI SNP Detail		 Chr10:92898068 Cfap54 within coordinates of
Rr223960 1600 bp distal
 SNP A/G G G G G G A G G G G A G G A A A
rs239973871
MGI SNP Detail		 Chr10:92898071 Cfap54 within coordinates of
Rr223960 1603 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs45993558
MGI SNP Detail		 Chr10:92898101 Cfap54 within coordinates of
Rr223960 1633 bp distal
 SNP A/G G G G G G G G G G G A G G G G
rs48440094
MGI SNP Detail		 Chr10:92898149 Cfap54 within coordinates of
Rr223960 1681 bp distal
 SNP A/G G G G G G G G A G G G G A G G A G A
rs47517757
MGI SNP Detail		 Chr10:92898154 Cfap54 within coordinates of
Rr223960 1686 bp distal
 SNP C C C C
rs584272703
MGI SNP Detail		 Chr10:92898164 Cfap54 within coordinates of
Rr223960 1696 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs220041696
MGI SNP Detail		 Chr10:92898222 Cfap54 within coordinates of
Rr223960 1754 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs238436714
MGI SNP Detail		 Chr10:92898242 Cfap54 within coordinates of
Rr223960 1774 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262430598
MGI SNP Detail		 Chr10:92898248 Cfap54 within coordinates of
Rr223960 1780 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs50087539
MGI SNP Detail		 Chr10:92898263 Cfap54 within coordinates of
Rr223960 1795 bp distal
 SNP C C C C C C
rs47855697
MGI SNP Detail		 Chr10:92898316 Cfap54 within coordinates of
Rr223960 1848 bp distal
 SNP C/T C C C C C C C T C C C C C C C T C T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs47422704
MGI SNP Detail		 Chr10:92898383 Cfap54 within coordinates of
Rr223960 1915 bp distal
 SNP T T T T T
rs52000157
MGI SNP Detail		 Chr10:92898388 Cfap54 within coordinates of
Rr223960 1920 bp distal
 SNP C/T C C C C C C C T C C C C T C C T C T
rs247539208
MGI SNP Detail		 Chr10:92898420 Cfap54 within coordinates of
Rr223960 1952 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
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Showing SNP(s) 1 - 53 of 53
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory
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