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Mouse SNP Summary
Symbol
Name
ID
Rr370936
regulatory region 370936
MGI:7667048

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs258083758
MGI SNP Detail
Alliance Variant
Chr1:17139823 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 1901 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216536032
MGI SNP Detail
Alliance Variant
Chr1:17139849 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 1875 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs580178628
MGI SNP Detail
Alliance Variant
Chr1:17139869 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 1855 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs582830940
MGI SNP Detail
Alliance Variant
Chr1:17139888 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 1836 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs237618281
MGI SNP Detail
Alliance Variant
Chr1:17139992 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 1732 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263211687
MGI SNP Detail
Alliance Variant
Chr1:17140050 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 1674 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222471578
MGI SNP Detail
Alliance Variant
Chr1:17140069 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 1655 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs32153622
MGI SNP Detail
Alliance Variant
Chr1:17140073 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 1651 bp upstream
SNP G/T T T T T T T T T T G T T G
rs32154415
MGI SNP Detail
Alliance Variant
Chr1:17140095 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 1629 bp upstream
SNP C/T C C C C C C C C C T C C C
rs249322360
MGI SNP Detail
Alliance Variant
Chr1:17140126 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 1598 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs32154418
MGI SNP Detail
Alliance Variant
Chr1:17140187 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 1537 bp upstream
SNP C/T C C C C C C T C C C T C C C C
rs32154421
MGI SNP Detail
Alliance Variant
Chr1:17140215 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 1509 bp upstream
SNP C/T C C C C C C T C C C T C C C
rs262702440
MGI SNP Detail
Alliance Variant
Chr1:17140221 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 1503 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs231999765
MGI SNP Detail
Alliance Variant
Chr1:17140250 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 1474 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T
rs32155064
MGI SNP Detail
Alliance Variant
Chr1:17140278 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 1446 bp upstream
SNP C/T C C C C C T C C C T C C C
rs32155067
MGI SNP Detail
Alliance Variant
Chr1:17140304 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 1420 bp upstream
SNP G/T T T T T T T G T T T G T T T T
rs32155070
MGI SNP Detail
Alliance Variant
Chr1:17140332 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 1392 bp upstream
SNP C/T T T T T T C T T T C T T
rs242341154
MGI SNP Detail
Alliance Variant
Chr1:17140371 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 1353 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212966028
MGI SNP Detail
Alliance Variant
Chr1:17140382 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 1342 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225671043
MGI SNP Detail
Alliance Variant
Chr1:17140391 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 1333 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C T C C C C
rs256739645
MGI SNP Detail
Alliance Variant
Chr1:17140399 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 1325 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216212387
MGI SNP Detail
Alliance Variant
Chr1:17140451 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 1273 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T C T T T T
rs241404931
MGI SNP Detail
Alliance Variant
Chr1:17140452 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 1272 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C T C C C C
rs254231903
MGI SNP Detail
Alliance Variant
Chr1:17140458 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 1266 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A T A A A A A A A A A A A A A A T A A A A
rs216466403
MGI SNP Detail
Alliance Variant
Chr1:17140465 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 1259 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs236165969
MGI SNP Detail
Alliance Variant
Chr1:17140574 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 1150 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A
rs249236028
MGI SNP Detail
Alliance Variant
Chr1:17140622 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 1102 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32155073
MGI SNP Detail
Alliance Variant
Chr1:17140677 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 1047 bp upstream
SNP A/C C C C C C C A C C C A C C C C
rs32147876
MGI SNP Detail
Alliance Variant
Chr1:17140703 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 1021 bp upstream
SNP A/C C C C C C C A C C C A C C C C
rs262431870
MGI SNP Detail
Alliance Variant
Chr1:17140746 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 978 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs224214110
MGI SNP Detail
Alliance Variant
Chr1:17140764 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 960 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs32147879
MGI SNP Detail
Alliance Variant
Chr1:17140786 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 938 bp upstream
SNP G/T G G G G G G T G G G G T G
rs258855943
MGI SNP Detail
Alliance Variant
Chr1:17140788 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 936 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs32147882
MGI SNP Detail
Alliance Variant
Chr1:17140795 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 929 bp upstream
SNP C/T T T T T T T C T T T C T T T
rs236068440
MGI SNP Detail
Alliance Variant
Chr1:17140822 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 902 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs254662940
MGI SNP Detail
Alliance Variant
Chr1:17140936 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 788 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A A A A A A A A C A A A A A A A A A A A A
rs32148705
MGI SNP Detail
Alliance Variant
Chr1:17140959 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 765 bp upstream
SNP C/T C C C C C T C C C T C C C C
rs32148708
MGI SNP Detail
Alliance Variant
Chr1:17141023 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 701 bp upstream
SNP C/T C C C C C T C C C T C C C
rs32148711
MGI SNP Detail
Alliance Variant
Chr1:17141237 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 487 bp upstream
SNP C/T C C C C C C T C C T C C C
rs232765063
MGI SNP Detail
Alliance Variant
Chr1:17141249 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 475 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs248233041
MGI SNP Detail
Alliance Variant
Chr1:17141252 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 472 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs217694184
MGI SNP Detail
Alliance Variant
Chr1:17141255 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 469 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236127228
MGI SNP Detail
Alliance Variant
Chr1:17141260 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 464 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243328122
MGI SNP Detail
Alliance Variant
Chr1:17141280 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 444 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs212683839
MGI SNP Detail
Alliance Variant
Chr1:17141348 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 376 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A A A A A A
rs237623768
MGI SNP Detail
Alliance Variant
Chr1:17141383 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 341 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G G G G G G G G G C G G G G
rs257592523
MGI SNP Detail
Alliance Variant
Chr1:17141402 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 322 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs32149494
MGI SNP Detail
Alliance Variant
Chr1:17141417 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 307 bp upstream
SNP C/G G G G G G G C G G G C G G C G
rs32149497
MGI SNP Detail
Alliance Variant
Chr1:17141467 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 257 bp upstream
SNP A/C C C C C C C A C C A C A C
rs585903421
MGI SNP Detail
Alliance Variant
Chr1:17141498 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 226 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs252512860
MGI SNP Detail
Alliance Variant
Chr1:17141561 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 163 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T G G G G G G G T G G G G
rs222566399
MGI SNP Detail
Alliance Variant
Chr1:17141582 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 142 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs235780410
MGI SNP Detail
Alliance Variant
Chr1:17141588 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 136 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs254757095
MGI SNP Detail
Alliance Variant
Chr1:17141591 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 133 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs222785058
MGI SNP Detail
Alliance Variant
Chr1:17141597 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 127 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs32149500
MGI SNP Detail
Alliance Variant
Chr1:17141614 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 110 bp upstream
SNP C/T C C C C C C C C C C C T C
rs32149503
MGI SNP Detail
Alliance Variant
Chr1:17141666 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 58 bp upstream
SNP C/T T T T T T T T T T T T T T C T
rs32150316
MGI SNP Detail
Alliance Variant
Chr1:17141685 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 39 bp upstream
SNP G/T G G G T G T G G T G G G
rs248393382
MGI SNP Detail
Alliance Variant
Chr1:17141723 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 1 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs32150319
MGI SNP Detail
Alliance Variant
Chr1:17141771 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 within coordinates of
SNP C/T C C C C C C C C C C C T C
rs224462750
MGI SNP Detail
Alliance Variant
Chr1:17141781 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs32150322
MGI SNP Detail
Alliance Variant
Chr1:17141819 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 within coordinates of
SNP C/T C C C C C T C C C
rs32151135
MGI SNP Detail
Alliance Variant
Chr1:17141894 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 within coordinates of
SNP C/T C C C C C C C C C T C
rs229655718
MGI SNP Detail
Alliance Variant
Chr1:17141906 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs32151138
MGI SNP Detail
Alliance Variant
Chr1:17141926 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 within coordinates of
SNP C/T C C C C C C T C C C T C C C C
rs215321259
MGI SNP Detail
Alliance Variant
Chr1:17141966 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G G G G G G G G G A G G G G
rs32151141
MGI SNP Detail
Alliance Variant
Chr1:17142133 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 within coordinates of
SNP G/T G G G G G G G G G G G G G T G
rs32151874
MGI SNP Detail
Alliance Variant
Chr1:17142179 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 within coordinates of
SNP C/G G G G G G G C G G G C G G G G
rs217320465
MGI SNP Detail
Alliance Variant
Chr1:17142197 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs579590349
MGI SNP Detail
Alliance Variant
Chr1:17142280 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs229866174
MGI SNP Detail
Alliance Variant
Chr1:17142284 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs582809032
MGI SNP Detail
Alliance Variant
Chr1:17142314 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs248836435
MGI SNP Detail
Alliance Variant
Chr1:17142323 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs586741043
MGI SNP Detail
Alliance Variant
Chr1:17142326 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs222266089
MGI SNP Detail
Alliance Variant
Chr1:17142327 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A A G A A A A A A G A A A A A A A A A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs244338200
MGI SNP Detail
Alliance Variant
Chr1:17142333 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 within coordinates of
SNP A/G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T G T T T T T T T A T T T T
rs262928350
MGI SNP Detail
Alliance Variant
Chr1:17142337 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs583402478
MGI SNP Detail
Alliance Variant
Chr1:17142350 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C C C C A C C C C C C C A C C C C
rs587373592
MGI SNP Detail
Alliance Variant
Chr1:17142370 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G G G G G G A G G G G G G A G G G G G G G G G G G G
rs581141963
MGI SNP Detail
Alliance Variant
Chr1:17142372 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C C C C C C T C C C C C C T C C C C C C C C C C C C
rs585142842
MGI SNP Detail
Alliance Variant
Chr1:17142385 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225064863
MGI SNP Detail
Alliance Variant
Chr1:17142390 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A A A C A A A A A A A C A A A A
rs581570049
MGI SNP Detail
Alliance Variant
Chr1:17142399 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 within coordinates of
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs584167558
MGI SNP Detail
Alliance Variant
Chr1:17142403 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs578343673
MGI SNP Detail
Alliance Variant
Chr1:17142404 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 within coordinates of
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs242103764
MGI SNP Detail
Alliance Variant
Chr1:17142407 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T G T T T T T T T T T T T T
rs261547938
MGI SNP Detail
Alliance Variant
Chr1:17142421 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T A T T T A T T T A
rs582379644
MGI SNP Detail
Alliance Variant
Chr1:17142441 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C C C C C C T C C C C C C T C C C C C C C T C C C C
rs224615125
MGI SNP Detail
Alliance Variant
Chr1:17142463 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 within coordinates of
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs584538469
MGI SNP Detail
Alliance Variant
Chr1:17142467 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 within coordinates of
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs579034368
MGI SNP Detail
Alliance Variant
Chr1:17142468 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 within coordinates of
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs582212688
MGI SNP Detail
Alliance Variant
Chr1:17142517 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs586361784
MGI SNP Detail
Alliance Variant
Chr1:17142527 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs580501428
MGI SNP Detail
Alliance Variant
Chr1:17142530 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs582781216
MGI SNP Detail
Alliance Variant
Chr1:17142556 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs585657688
MGI SNP Detail
Alliance Variant
Chr1:17142568 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs579551892
MGI SNP Detail
Alliance Variant
Chr1:17142587 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs583520950
MGI SNP Detail
Alliance Variant
Chr1:17142590 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 within coordinates of
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs585715585
MGI SNP Detail
Alliance Variant
Chr1:17142592 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 within coordinates of
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs238338263
MGI SNP Detail
Alliance Variant
Chr1:17142751 Gm28376 within coordinates of
Jph1 Intron
Jph1 Noncoding-Transcript-Variant
Rr370936 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C C
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Showing SNP(s) 1 - 100 of 136

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory

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