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Mouse SNP Summary
Symbol
Name
ID
Rr370968
regulatory region 370968
MGI:7667080

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs215613313
MGI SNP Detail
Alliance Variant
Chr1:21022628 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 1983 bp upstream
Rr408349 within coordinates of
SNP A/G/T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T T T T T T G T T T T T A T T
rs235472979
MGI SNP Detail
Alliance Variant
Chr1:21022631 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 1980 bp upstream
Rr408349 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C
rs255290857
MGI SNP Detail
Alliance Variant
Chr1:21022663 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 1948 bp upstream
Rr408349 within coordinates of
SNP G/T G T T T T T G T T T T T T T T T T G T T T T T T T T G G T T T T T T T T T T T T T T T
rs108837770
MGI SNP Detail
Alliance Variant
Chr1:21022665 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 1946 bp upstream
Rr408349 within coordinates of
SNP G G G G
rs583244843
MGI SNP Detail
Alliance Variant
Chr1:21022674 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 1937 bp upstream
Rr408349 within coordinates of
SNP A/G/T A A A A A A A A A A A A A A A A T A A G A A A A A A A A G A A A A A A A A A A A A
rs32249232
MGI SNP Detail
Alliance Variant
Chr1:21022776 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 1835 bp upstream
SNP A/G G G A A
rs256435760
MGI SNP Detail
Alliance Variant
Chr1:21022783 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 1828 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C
rs222293466
MGI SNP Detail
Alliance Variant
Chr1:21022810 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 1801 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs238574080
MGI SNP Detail
Alliance Variant
Chr1:21022918 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 1693 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs257272591
MGI SNP Detail
Alliance Variant
Chr1:21022920 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 1691 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs31136430
MGI SNP Detail
Alliance Variant
Chr1:21023001 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 1610 bp upstream
SNP A/T T A
rs251596974
MGI SNP Detail
Alliance Variant
Chr1:21023005 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 1606 bp upstream
SNP G/T T G
rs266254715
MGI SNP Detail
Alliance Variant
Chr1:21023074 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 1537 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs227992172
MGI SNP Detail
Alliance Variant
Chr1:21023078 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 1533 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs254499099
MGI SNP Detail
Alliance Variant
Chr1:21023090 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 1521 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs262522326
MGI SNP Detail
Alliance Variant
Chr1:21023091 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 1520 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs36523381
MGI SNP Detail
Alliance Variant
Chr1:21023106 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 1505 bp upstream
SNP A/G A A A A A A G A A A G A A G A
rs32656245
MGI SNP Detail
Alliance Variant
Chr1:21023127 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 1484 bp upstream
SNP C/T C T T T C T C T T C C T T C C
rs586576655
MGI SNP Detail
Alliance Variant
Chr1:21023190 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 1421 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs215603140
MGI SNP Detail
Alliance Variant
Chr1:21023202 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 1409 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235298122
MGI SNP Detail
Alliance Variant
Chr1:21023203 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 1408 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs261585737
MGI SNP Detail
Alliance Variant
Chr1:21023205 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 1406 bp upstream
SNP A/C A C
rs212241765
MGI SNP Detail
Alliance Variant
Chr1:21023286 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 1325 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs38419591
MGI SNP Detail
Alliance Variant
Chr1:21023302 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 1309 bp upstream
SNP C/T C C C C C C C C C C T C C C
rs235453154
MGI SNP Detail
Alliance Variant
Chr1:21023327 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 1284 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs261925343
MGI SNP Detail
Alliance Variant
Chr1:21023370 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 1241 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs223256732
MGI SNP Detail
Alliance Variant
Chr1:21023399 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 1212 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs36434851
MGI SNP Detail
Alliance Variant
Chr1:21023464 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 1147 bp upstream
SNP A/G A A A A A A A A A G A A A
rs581840326
MGI SNP Detail
Alliance Variant
Chr1:21023471 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 1140 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs232248076
MGI SNP Detail
Alliance Variant
Chr1:21023480 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 1131 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs251434533
MGI SNP Detail
Alliance Variant
Chr1:21023484 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 1127 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221480125
MGI SNP Detail
Alliance Variant
Chr1:21023490 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 1121 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs31910904
MGI SNP Detail
Alliance Variant
Chr1:21023492 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 1119 bp upstream
SNP A/C A C C
rs264595353
MGI SNP Detail
Alliance Variant
Chr1:21023517 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 1094 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C G C C C C
rs36549748
MGI SNP Detail
Alliance Variant
Chr1:21023524 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 1087 bp upstream
SNP A/T A A A A A A A A A A T A T A T
rs242627159
MGI SNP Detail
Alliance Variant
Chr1:21023538 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 1073 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs584843053
MGI SNP Detail
Alliance Variant
Chr1:21023691 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 920 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs587257482
MGI SNP Detail
Alliance Variant
Chr1:21023716 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 895 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T C T T T T
rs265132202
MGI SNP Detail
Alliance Variant
Chr1:21023745 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 866 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs36305224
MGI SNP Detail
Alliance Variant
Chr1:21023758 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 853 bp upstream
SNP C/T T T T T T T T T T C T T
rs581154440
MGI SNP Detail
Alliance Variant
Chr1:21023838 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 773 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C C C C C C C C G C C C C C C C C C C C C
rs226887703
MGI SNP Detail
Alliance Variant
Chr1:21023861 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 750 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246234163
MGI SNP Detail
Alliance Variant
Chr1:21023881 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 730 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs259718010
MGI SNP Detail
Alliance Variant
Chr1:21023888 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 723 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T C T T T T
rs228353243
MGI SNP Detail
Alliance Variant
Chr1:21023909 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 702 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs245035379
MGI SNP Detail
Alliance Variant
Chr1:21023936 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 675 bp upstream
SNP A/G G A
rs211761349
MGI SNP Detail
Alliance Variant
Chr1:21023941 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 670 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs37962242
MGI SNP Detail
Alliance Variant
Chr1:21023957 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 654 bp upstream
SNP A/G G G G G G G G G A G
rs36964488
MGI SNP Detail
Alliance Variant
Chr1:21024002 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 609 bp upstream
SNP C/T C C C C C C C C C T C C C
rs250688600
MGI SNP Detail
Alliance Variant
Chr1:21024069 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 542 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs36866246
MGI SNP Detail
Alliance Variant
Chr1:21024118 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 493 bp upstream
SNP A/C C C C C C C A C C C C C C
rs232779861
MGI SNP Detail
Alliance Variant
Chr1:21024126 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 485 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251383524
MGI SNP Detail
Alliance Variant
Chr1:21024176 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 435 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216117572
MGI SNP Detail
Alliance Variant
Chr1:21024264 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 347 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs239682759
MGI SNP Detail
Alliance Variant
Chr1:21024267 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 344 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A A A A A A
rs264236519
MGI SNP Detail
Alliance Variant
Chr1:21024319 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 292 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220513105
MGI SNP Detail
Alliance Variant
Chr1:21024355 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 256 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs36522298
MGI SNP Detail
Alliance Variant
Chr1:21024375 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 236 bp upstream
SNP C/T C C C C C C C C T C C
rs257483080
MGI SNP Detail
Alliance Variant
Chr1:21024382 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 229 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220525145
MGI SNP Detail
Alliance Variant
Chr1:21024398 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 213 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs240811364
MGI SNP Detail
Alliance Variant
Chr1:21024411 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 200 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs260213369
MGI SNP Detail
Alliance Variant
Chr1:21024417 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 194 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228402057
MGI SNP Detail
Alliance Variant
Chr1:21024424 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 187 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs248138860
MGI SNP Detail
Alliance Variant
Chr1:21024432 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 179 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs258320769
MGI SNP Detail
Alliance Variant
Chr1:21024466 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 145 bp upstream
SNP A/G G A
rs228376255
MGI SNP Detail
Alliance Variant
Chr1:21024563 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 48 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227315850
MGI SNP Detail
Alliance Variant
Chr1:21024601 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 10 bp upstream
SNP C/T T C
rs36750127
MGI SNP Detail
Alliance Variant
Chr1:21024615 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 within coordinates of
SNP C/T T T T T T T C T T T T T T C T
rs217939819
MGI SNP Detail
Alliance Variant
Chr1:21024621 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 within coordinates of
SNP C/T C T
rs240111632
MGI SNP Detail
Alliance Variant
Chr1:21024659 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 within coordinates of
SNP A/G A G
rs581001535
MGI SNP Detail
Alliance Variant
Chr1:21024668 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T T C C C C T C C C C C T C T C C C C T T C C C
rs245844352
MGI SNP Detail
Alliance Variant
Chr1:21024727 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216567455
MGI SNP Detail
Alliance Variant
Chr1:21024730 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs37812319
MGI SNP Detail
Alliance Variant
Chr1:21024877 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 within coordinates of
SNP A/G G G G G G G G G G G G A G
rs261057934
MGI SNP Detail
Alliance Variant
Chr1:21024908 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs37782888
MGI SNP Detail
Alliance Variant
Chr1:21024969 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 within coordinates of
SNP G/T G G G G G G T G G G G G G G
rs252224477
MGI SNP Detail
Alliance Variant
Chr1:21024999 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 within coordinates of
SNP A/T T A
rs37607626
MGI SNP Detail
Alliance Variant
Chr1:21025002 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 within coordinates of
SNP A/G A A A A A A G A A A G A G A
rs38330958
MGI SNP Detail
Alliance Variant
Chr1:21025062 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 within coordinates of
SNP C/T C C C C C C T C C C T C C
rs240900514
MGI SNP Detail
Alliance Variant
Chr1:21025069 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs253825687
MGI SNP Detail
Alliance Variant
Chr1:21025143 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs36646829
MGI SNP Detail
Alliance Variant
Chr1:21025146 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 within coordinates of
SNP C/G C C C C C C G C C C G C C C C
rs36583688
MGI SNP Detail
Alliance Variant
Chr1:21025288 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 within coordinates of
SNP A/C C C C C C C A C C C A C C C C
rs261359526
MGI SNP Detail
Alliance Variant
Chr1:21025348 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A G A A A A A A G A A A A A A A G A A A A
rs228833866
MGI SNP Detail
Alliance Variant
Chr1:21025355 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G G G A G G G G
rs242779263
MGI SNP Detail
Alliance Variant
Chr1:21025368 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs255962403
MGI SNP Detail
Alliance Variant
Chr1:21025403 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs226783659
MGI SNP Detail
Alliance Variant
Chr1:21025446 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs36308947
MGI SNP Detail
Alliance Variant
Chr1:21025453 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 within coordinates of
SNP A/T T T T T T T A T T A T T T
rs38471118
MGI SNP Detail
Alliance Variant
Chr1:21025532 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 within coordinates of
SNP C/T C C C C C C T C C C C C C C C
rs233778719
MGI SNP Detail
Alliance Variant
Chr1:21025539 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs37340728
MGI SNP Detail
Alliance Variant
Chr1:21025600 Efhc1 Coding-Synonymous
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 within coordinates of
SNP C/T C C C C C C T C C T T C C C
rs212220145
MGI SNP Detail
Alliance Variant
Chr1:21025632 Efhc1 Coding-NonSynonymous
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G
rs237419846
MGI SNP Detail
Alliance Variant
Chr1:21025646 Efhc1 Coding-Synonymous
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs36970268
MGI SNP Detail
Alliance Variant
Chr1:21025666 Efhc1 Coding-Synonymous
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 within coordinates of
SNP C/G G G G G G G G G G C G G G
rs245032036
MGI SNP Detail
Alliance Variant
Chr1:21025740 Efhc1 Coding-NonSynonymous
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs214482499
MGI SNP Detail
Alliance Variant
Chr1:21025853 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 within coordinates of
SNP A/C/T C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C T
rs36632978
MGI SNP Detail
Alliance Variant
Chr1:21025864 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 within coordinates of
SNP C/T C C C C C C T C C C T C C T C
rs253998702
MGI SNP Detail
Alliance Variant
Chr1:21025883 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs226512451
MGI SNP Detail
Alliance Variant
Chr1:21025890 Efhc1 Intron
Efhc1 Noncoding-Transcript-Variant
Gm51618 within coordinates of
Rr370968 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
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Showing SNP(s) 1 - 100 of 198

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory