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Mouse SNP Summary
Symbol
Name
ID
Rr379340
regulatory region 379340
MGI:7675452

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Showing SNP(s) 1 - 81 of 81

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs251246973
MGI SNP Detail
Chr6:50582179 Rr379340 1997 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G G
rs30850940
MGI SNP Detail
Chr6:50582239 Rr379340 1937 bp upstream
SNP C/T C C T T T
rs239400155
MGI SNP Detail
Chr6:50582240 Rr379340 1936 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs582716385
MGI SNP Detail
Chr6:50582325 Rr379340 1851 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs52350777
MGI SNP Detail
Chr6:50582374 Rr379340 1802 bp upstream
SNP C/T T C C
rs264301451
MGI SNP Detail
Chr6:50582379 Rr379340 1797 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs220648919
MGI SNP Detail
Chr6:50582409 Rr379340 1767 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C T C C T C C C C C C T T T C C C C C C C C C C C C C C
rs238094942
MGI SNP Detail
Chr6:50582479 Rr379340 1697 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs30410929
MGI SNP Detail
Chr6:50582488 Rr379340 1688 bp upstream
SNP C/T C C T T T
rs220394834
MGI SNP Detail
Chr6:50582509 Rr379340 1667 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs240865179
MGI SNP Detail
Chr6:50582525 Rr379340 1651 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G C G C C G G G C C G C G G G C G G C C C G C G G G G G G G C G G C C
rs263836366
MGI SNP Detail
Chr6:50582529 Rr379340 1647 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs234370248
MGI SNP Detail
Chr6:50582546 Rr379340 1630 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs254996220
MGI SNP Detail
Chr6:50582556 Rr379340 1620 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C A C C C C
rs266065193
MGI SNP Detail
Chr6:50582576 Rr379340 1600 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs223300430
MGI SNP Detail
Chr6:50582583 Rr379340 1593 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs242901199
MGI SNP Detail
Chr6:50582617 Rr379340 1559 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T G G G G G G G T G G G G
rs30665102
MGI SNP Detail
Chr6:50582621 Rr379340 1555 bp upstream
SNP A/C C C A A A
rs50906409
MGI SNP Detail
Chr6:50582632 Rr379340 1544 bp upstream
SNP C/T C C C T
rs231871975
MGI SNP Detail
Chr6:50582647 Rr379340 1529 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs30756036
MGI SNP Detail
Chr6:50582663 Rr379340 1513 bp upstream
SNP A/G G G A A A
rs216671878
MGI SNP Detail
Chr6:50582664 Rr379340 1512 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs578527944
MGI SNP Detail
Chr6:50582690 Rr379340 1486 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs581782847
MGI SNP Detail
Chr6:50582691 Rr379340 1485 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C C
rs585429590
MGI SNP Detail
Chr6:50582693 Rr379340 1483 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs579864074
MGI SNP Detail
Chr6:50582694 Rr379340 1482 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs241874313
MGI SNP Detail
Chr6:50582711 Rr379340 1465 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A A
rs260794398
MGI SNP Detail
Chr6:50582738 Rr379340 1438 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T
rs219994639
MGI SNP Detail
Chr6:50582751 Rr379340 1425 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs230852204
MGI SNP Detail
Chr6:50582771 Rr379340 1405 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C C C C A C C C C C C C A C C C C
rs251401196
MGI SNP Detail
Chr6:50582812 Rr379340 1364 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs220331367
MGI SNP Detail
Chr6:50582825 Rr379340 1351 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A A A C A A A A A A A C A A A A
rs240609933
MGI SNP Detail
Chr6:50582854 Rr379340 1322 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs586189074
MGI SNP Detail
Chr6:50582883 Rr379340 1293 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G A G G G G G G A G G G G G G G A G G
rs580162664
MGI SNP Detail
Chr6:50582896 Rr379340 1280 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T A T T T T T T T T T T T
rs583884921
MGI SNP Detail
Chr6:50582931 Rr379340 1245 bp upstream
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs587443438
MGI SNP Detail
Chr6:50583171 Rr379340 1005 bp upstream
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs107963786
MGI SNP Detail
Chr6:50583259 Rr379340 917 bp upstream
SNP A/G A G G
rs579553861
MGI SNP Detail
Chr6:50583335 Rr379340 841 bp upstream
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs582931643
MGI SNP Detail
Chr6:50583372 Rr379340 804 bp upstream
SNP C/T T T T C C C C C T C C C C C C C T T T T C T C C C T T C T C T C C T T T C T C C C C C C C C
rs108552511
MGI SNP Detail
Chr6:50583502 Rr379340 674 bp upstream
SNP A/G A G G
rs47338378
MGI SNP Detail
Chr6:50583527 Rr379340 649 bp upstream
SNP C C C C
rs46036112
MGI SNP Detail
Chr6:50583635 Rr379340 541 bp upstream
SNP C C C
rs587116092
MGI SNP Detail
Chr6:50583648 Rr379340 528 bp upstream
SNP A/G A A A A A A A A A A A A G A A A A A A A A A A A A A A A G A A A A A A
rs584589369
MGI SNP Detail
Chr6:50583705 Rr379340 471 bp upstream
SNP C/T C C C C C C C C C C C C T C C C C C C C C C C C C C C C T C C T
rs587448673
MGI SNP Detail
Chr6:50583971 Rr379340 205 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T
rs581285423
MGI SNP Detail
Chr6:50584173 Rr379340 3 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs584907493
MGI SNP Detail
Chr6:50584221 Rr379340 within coordinates of
SNP G/T T T T T T G T T T T T T T G G T T G T T T T G T T G T G T T T G G G T T T T T G T T T T T T G
rs579169958
MGI SNP Detail
Chr6:50584304 Rr379340 within coordinates of
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs581845668
MGI SNP Detail
Chr6:50584306 Rr379340 within coordinates of
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs226194579
MGI SNP Detail
Chr6:50584418 Rr379340 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G A G G G G G G G A G G G G
rs584236836
MGI SNP Detail
Chr6:50584492 Rr379340 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs578365573
MGI SNP Detail
Chr6:50584557 Rr379340 within coordinates of
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs29711964
MGI SNP Detail
Chr6:50584565 Rr379340 within coordinates of
SNP A/C C C C C C C C C C C A C C A C
rs52138197
MGI SNP Detail
Chr6:50584576 Rr379340 within coordinates of
SNP A/C A C
rs108852082
MGI SNP Detail
Chr6:50584591 Rr379340 within coordinates of
SNP A A A
rs29711965
MGI SNP Detail
Chr6:50584600 Rr379340 within coordinates of
SNP A/C C C C C C C C C C C C C C A C
rs582363329
MGI SNP Detail
Chr6:50584622 Rr379340 within coordinates of
SNP C/G C C C C C C C C C C C C C C G C C G C C C C G C C C G C C C C G C C C C C C C C C C
rs29711969
MGI SNP Detail
Chr6:50584635 Rr379340 within coordinates of
SNP A/C C C C C C C C C C C C C C C A
rs29711971
MGI SNP Detail
Chr6:50584686 Rr379340 within coordinates of
SNP G/T G T T T G T T T T T T T T T G
rs46617076
MGI SNP Detail
Chr6:50584705 Rr379340 within coordinates of
SNP A/G G G A A A A A G A A A A A A A G G A A A A A A A A A A A A G A A A A A A A A A A A G A A A A A A A A
rs108909795
MGI SNP Detail
Chr6:50584728 Rr379340 within coordinates of
SNP C C C
rs585780947
MGI SNP Detail
Chr6:50584792 Rr379340 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs579087603
MGI SNP Detail
Chr6:50584828 Rr379340 within coordinates of
SNP A/C C C C A A A A A C A A A A A A A C C C C A C A A A C A A C C C A A C A A A A C A A A A A C C
rs582368385
MGI SNP Detail
Chr6:50584843 Rr379340 within coordinates of
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs585980516
MGI SNP Detail
Chr6:50584846 Rr379340 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C A A C C C C C C A C C A C A C C C C C C C A C C C C
rs580338595
MGI SNP Detail
Chr6:50584979 Rr379340 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T
rs582952540
MGI SNP Detail
Chr6:50585529 Rr379340 within coordinates of
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs52382961
MGI SNP Detail
Chr6:50585534 Rr379340 within coordinates of
SNP C/T T C C T
rs52143745
MGI SNP Detail
Chr6:50585545 Rr379340 within coordinates of
SNP C/G G C C
rs579580073
MGI SNP Detail
Chr6:50585552 Rr379340 within coordinates of
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs52174074
MGI SNP Detail
Chr6:50585553 Rr379340 within coordinates of
SNP T T T T
rs583590282
MGI SNP Detail
Chr6:50585561 Rr379340 within coordinates of
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs52122711
MGI SNP Detail
Chr6:50585562 Rr379340 within coordinates of
SNP T T T T T
rs52410521
MGI SNP Detail
Chr6:50585576 Rr379340 within coordinates of
SNP C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs586949572
MGI SNP Detail
Chr6:50585622 Gm4782 within coordinates of
Rr379340 within coordinates of
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs50239782
MGI SNP Detail
Chr6:50587685 Rr379340 1732 bp downstream
SNP G/T T T T G G G G G T G G G G G G G T T T G G G G T G G T T G G G G G G T G G G T G G T T
rs242840537
MGI SNP Detail
Chr6:50587688 Rr379340 1735 bp downstream
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs50017010
MGI SNP Detail
Chr6:50587689 Rr379340 1736 bp downstream
SNP C/G G G G C C C C C G C C C C C C C G G G C C C C G C C G C C C C C C G C C C G C C G G
rs583588613
MGI SNP Detail
Chr6:50587859 Rr379340 1906 bp downstream
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
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Showing SNP(s) 1 - 81 of 81

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory

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