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Mouse SNP Summary
Symbol
Name
ID 		Rr388334
regulatory region 388334
MGI:7684446

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs232780409
MGI SNP Detail		 Chr13:43155413 Gm15809 within coordinates of
Gm61192 within coordinates of
Phactr1 within coordinates of
Rr388334 1983 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G G G G G G G G G G G G G G
rs252150754
MGI SNP Detail		 Chr13:43155511 Gm15809 within coordinates of
Gm61192 within coordinates of
Phactr1 within coordinates of
Rr388334 1885 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T T T T T T T T T T T T T T
rs222622244
MGI SNP Detail		 Chr13:43155553 Gm15809 within coordinates of
Gm61192 within coordinates of
Phactr1 within coordinates of
Rr388334 1843 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241335213
MGI SNP Detail		 Chr13:43156151 Gm15809 within coordinates of
Gm61192 within coordinates of
Phactr1 within coordinates of
Rr388334 1245 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G G G G G G G G G G G G G G
rs50255185
MGI SNP Detail		 Chr13:43156165 Gm15809 within coordinates of
Gm61192 within coordinates of
Phactr1 within coordinates of
Rr388334 1231 bp upstream
 SNP G/T G G G G G G G G G G G G G T
rs51074585
MGI SNP Detail		 Chr13:43156185 Gm15809 within coordinates of
Gm61192 within coordinates of
Phactr1 within coordinates of
Rr388334 1211 bp upstream
 SNP C/G G G G G G G C G G G G G G G
rs247728835
MGI SNP Detail		 Chr13:43156263 Gm15809 within coordinates of
Gm61192 within coordinates of
Phactr1 within coordinates of
Rr388334 1133 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs50435676
MGI SNP Detail		 Chr13:43156285 Gm15809 within coordinates of
Gm61192 within coordinates of
Phactr1 within coordinates of
Rr388334 1111 bp upstream
 SNP C/T C C C C C C T C C C C C C C C
rs49051709
MGI SNP Detail		 Chr13:43156300 Gm15809 within coordinates of
Gm61192 within coordinates of
Phactr1 within coordinates of
Rr388334 1096 bp upstream
 SNP A/G G A G G G A A G A A A G A
rs238741961
MGI SNP Detail		 Chr13:43156315 Gm15809 within coordinates of
Gm61192 within coordinates of
Phactr1 within coordinates of
Rr388334 1081 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255093531
MGI SNP Detail		 Chr13:43156334 Gm15809 within coordinates of
Gm61192 within coordinates of
Phactr1 within coordinates of
Rr388334 1062 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G G G G G G G G G A G G G G
rs232056294
MGI SNP Detail		 Chr13:43156351 Gm15809 within coordinates of
Gm61192 within coordinates of
Phactr1 within coordinates of
Rr388334 1045 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A G A A A A A A A A A A A A A A A A A A A
rs256988808
MGI SNP Detail		 Chr13:43156358 Gm15809 within coordinates of
Gm61192 within coordinates of
Phactr1 within coordinates of
Rr388334 1038 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A G A A A A A A A A A A A A A A A A A A A
rs264287428
MGI SNP Detail		 Chr13:43156390 Gm15809 within coordinates of
Gm61192 within coordinates of
Phactr1 within coordinates of
Rr388334 1006 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C A C C C C C C C C C C C C C C C C C C
rs233793692
MGI SNP Detail		 Chr13:43156404 Gm15809 within coordinates of
Gm61192 within coordinates of
Phactr1 within coordinates of
Rr388334 992 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G A G G G G G G G G G G G G G G G G G G
rs244195938
MGI SNP Detail		 Chr13:43156418 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 978 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G T G G G G G G G G G G G G G G G G G G G
rs581331934
MGI SNP Detail		 Chr13:43156447 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 949 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A A A A A A A A A A A A A A
rs583646202
MGI SNP Detail		 Chr13:43156472 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 924 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C C C C C C C C C C C C C C
rs29822256
MGI SNP Detail		 Chr13:43156481 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 915 bp upstream
 SNP G/T T T T G T T T G G G T G G G T G
rs232839090
MGI SNP Detail		 Chr13:43156506 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 890 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A A A A A A A A A A A A A A
rs244952772
MGI SNP Detail		 Chr13:43156523 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 873 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G G G G G G G G G G G G G G
rs214307086
MGI SNP Detail		 Chr13:43156535 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 861 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A A A A A A A A A A A A A A
rs238713770
MGI SNP Detail		 Chr13:43156540 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 856 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G G G G G G G G G G G G G G
rs29566085
MGI SNP Detail		 Chr13:43156547 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 849 bp upstream
 SNP C/G G G G C G G G C C G C C C G C
rs226971443
MGI SNP Detail		 Chr13:43156665 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 731 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs234522470
MGI SNP Detail		 Chr13:43156779 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 617 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C C C C C C C C C C C C C C
rs249211095
MGI SNP Detail		 Chr13:43156817 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 579 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A A A A A A A A A A A A A A
rs218180595
MGI SNP Detail		 Chr13:43156835 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 561 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G G G G G G G G G G G G G G
rs238779799
MGI SNP Detail		 Chr13:43156871 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 525 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T T T T T T T T T T T T T T
rs262545531
MGI SNP Detail		 Chr13:43156873 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 523 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A A A A A A A A A A A A A A A A
rs224789007
MGI SNP Detail		 Chr13:43156918 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 478 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244848804
MGI SNP Detail		 Chr13:43156926 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 470 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C C C C C C C C C C C C C C
rs266048343
MGI SNP Detail		 Chr13:43156937 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 459 bp upstream
 SNP A/C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C A C C C C C A C C C C C C C C C C C C C C A C C C C
rs232942082
MGI SNP Detail		 Chr13:43156961 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 435 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C C C C C C C C C T C C C C
rs29228984
MGI SNP Detail		 Chr13:43156995 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 401 bp upstream
 SNP A/G G G G A G G G A G A G A A A G A
rs29530602
MGI SNP Detail		 Chr13:43157248 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 148 bp upstream
 SNP A/G A G G
rs226406839
MGI SNP Detail		 Chr13:43157266 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 130 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C C C C C C C C C C C C A C C C C
rs244986499
MGI SNP Detail		 Chr13:43157276 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 120 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C C C C C C C C C T C C C C
rs216592630
MGI SNP Detail		 Chr13:43157295 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 101 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G G G G G G G G G A G G G G
rs221114300
MGI SNP Detail		 Chr13:43157339 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 57 bp upstream
 SNP A/T A T
rs232089566
MGI SNP Detail		 Chr13:43157352 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 44 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29764790
MGI SNP Detail		 Chr13:43157442 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 within coordinates of
 SNP C/T C C T T
rs219161650
MGI SNP Detail		 Chr13:43157458 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs234559999
MGI SNP Detail		 Chr13:43157471 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T T T T T T T T T C T T T T
rs249038094
MGI SNP Detail		 Chr13:43157484 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T T T T T T T T T C T T T T
rs212373263
MGI SNP Detail		 Chr13:43157489 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs232335472
MGI SNP Detail		 Chr13:43157559 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 within coordinates of
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs262155901
MGI SNP Detail		 Chr13:43157570 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G A G G G G G G G G G G G G G G A G G G G
rs30092673
MGI SNP Detail		 Chr13:43157588 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 within coordinates of
 SNP C/T C C T
rs587234824
MGI SNP Detail		 Chr13:43157596 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs248384507
MGI SNP Detail		 Chr13:43157602 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A A A A A A A A A A A A A A A
rs260658014
MGI SNP Detail		 Chr13:43157605 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G G G G G G G G G G G G G
rs237855668
MGI SNP Detail		 Chr13:43157659 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255781269
MGI SNP Detail		 Chr13:43157672 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs226438875
MGI SNP Detail		 Chr13:43157709 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A G A A
rs581449716
MGI SNP Detail		 Chr13:43157716 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs586648355
MGI SNP Detail		 Chr13:43157734 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs581125527
MGI SNP Detail		 Chr13:43157811 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 within coordinates of
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs584729581
MGI SNP Detail		 Chr13:43157813 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs238777593
MGI SNP Detail		 Chr13:43157819 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G
rs582481498
MGI SNP Detail		 Chr13:43157840 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 within coordinates of
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs584696373
MGI SNP Detail		 Chr13:43157854 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs579282828
MGI SNP Detail		 Chr13:43157862 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs582767575
MGI SNP Detail		 Chr13:43157876 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs585568050
MGI SNP Detail		 Chr13:43157943 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 within coordinates of
 SNP C/T C C T C C C C C C C T T C C C C C C C C C C C C C C C C
rs579740839
MGI SNP Detail		 Chr13:43157975 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 within coordinates of
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs33883349
MGI SNP Detail		 Chr13:43157981 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 within coordinates of
 SNP C/G C C C G G
rs228469994
MGI SNP Detail		 Chr13:43158043 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 within coordinates of
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs581960633
MGI SNP Detail		 Chr13:43158047 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 within coordinates of
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs243241322
MGI SNP Detail		 Chr13:43158067 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs212306035
MGI SNP Detail		 Chr13:43158072 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs232281063
MGI SNP Detail		 Chr13:43158074 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs257384269
MGI SNP Detail		 Chr13:43158077 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C C C C C C C C C C C C C
rs579826571
MGI SNP Detail		 Chr13:43158108 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs217466498
MGI SNP Detail		 Chr13:43158122 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs238271745
MGI SNP Detail		 Chr13:43158148 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G G G G G G G G G G G G G G
rs264408392
MGI SNP Detail		 Chr13:43158200 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs222349095
MGI SNP Detail		 Chr13:43158220 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs237690872
MGI SNP Detail		 Chr13:43158222 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29231936
MGI SNP Detail		 Chr13:43158309 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 within coordinates of
 SNP A/G A A A G G
rs33851184
MGI SNP Detail		 Chr13:43158319 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 9 bp downstream
 SNP A/G G G G A G A G A G A A A G A
rs245678723
MGI SNP Detail		 Chr13:43158420 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 110 bp downstream
Rr478223 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A A A A A A A A A A A A A A
rs263519522
MGI SNP Detail		 Chr13:43158435 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 125 bp downstream
Rr478223 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T T T T T T T T T T T T T T
rs231937071
MGI SNP Detail		 Chr13:43158450 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 140 bp downstream
Rr478223 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C C C C C C C C C C C C A C C C C
rs29552103
MGI SNP Detail		 Chr13:43158558 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 248 bp downstream
Rr478223 within coordinates of
 SNP C/G G G C C
rs258920903
MGI SNP Detail		 Chr13:43158573 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 263 bp downstream
Rr478223 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224333023
MGI SNP Detail		 Chr13:43158595 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 285 bp downstream
Rr478223 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs243181899
MGI SNP Detail		 Chr13:43158604 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 294 bp downstream
Rr478223 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C C C C C C C C C T C C C C
rs253951619
MGI SNP Detail		 Chr13:43158605 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 295 bp downstream
Rr478223 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226289639
MGI SNP Detail		 Chr13:43158610 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 300 bp downstream
Rr478223 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255439315
MGI SNP Detail		 Chr13:43158611 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 301 bp downstream
Rr478223 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217125353
MGI SNP Detail		 Chr13:43158638 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 328 bp downstream
Rr478223 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs29882597
MGI SNP Detail		 Chr13:43158697 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 387 bp downstream
Rr478223 within coordinates of
 SNP C/T T T C C
rs255074370
MGI SNP Detail		 Chr13:43158705 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 395 bp downstream
Rr478223 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217048424
MGI SNP Detail		 Chr13:43158711 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 401 bp downstream
Rr478223 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231121847
MGI SNP Detail		 Chr13:43158760 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 450 bp downstream
Rr478223 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249315585
MGI SNP Detail		 Chr13:43158789 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 479 bp downstream
Rr478223 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs219952176
MGI SNP Detail		 Chr13:43158839 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 529 bp downstream
Rr478223 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T T T T T T T T T C T T T T
rs235985091
MGI SNP Detail		 Chr13:43158842 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 532 bp downstream
Rr478223 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs263198436
MGI SNP Detail		 Chr13:43158854 Gm15809 within coordinates of
Phactr1 within coordinates of
Rr388334 544 bp downstream
Rr478223 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 100 of 152
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory