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Mouse SNP Summary
Symbol
Name
ID 		Rr390657
regulatory region 390657
MGI:7686769

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs48136817
MGI SNP Detail		 Chr15:41765851 Rr390657 1936 bp upstream
 SNP G/T G G T G
rs49965443
MGI SNP Detail		 Chr15:41765887 Rr390657 1900 bp upstream
 SNP A/G A A G A
rs212858830
MGI SNP Detail		 Chr15:41765952 Rr390657 1835 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs583395287
MGI SNP Detail		 Chr15:41765982 Rr390657 1805 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs586762829
MGI SNP Detail		 Chr15:41765987 Rr390657 1800 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs50434971
MGI SNP Detail		 Chr15:41766021 Rr390657 1766 bp upstream
 SNP T T T
rs48920650
MGI SNP Detail		 Chr15:41766063 Rr390657 1724 bp upstream
 SNP A A A A A
rs50992632
MGI SNP Detail		 Chr15:41766064 Rr390657 1723 bp upstream
 SNP A/C A A C A
rs234677682
MGI SNP Detail		 Chr15:41766069 Rr390657 1718 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs51254557
MGI SNP Detail		 Chr15:41766082 Rr390657 1705 bp upstream
 SNP T T T
rs47829651
MGI SNP Detail		 Chr15:41766108 Rr390657 1679 bp upstream
 SNP A/G A A G A
rs48886498
MGI SNP Detail		 Chr15:41766115 Rr390657 1672 bp upstream
 SNP C/T T T C T
rs256201337
MGI SNP Detail		 Chr15:41766187 Rr390657 1600 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs47827191
MGI SNP Detail		 Chr15:41766191 Rr390657 1596 bp upstream
 SNP A/C A A C A
rs45776751
MGI SNP Detail		 Chr15:41766207 Rr390657 1580 bp upstream
 SNP C/T T T C T
rs265557751
MGI SNP Detail		 Chr15:41766229 Rr390657 1558 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs46905017
MGI SNP Detail		 Chr15:41766240 Rr390657 1547 bp upstream
 SNP A/C C C A C
rs240971677
MGI SNP Detail		 Chr15:41766254 Rr390657 1533 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs580649830
MGI SNP Detail		 Chr15:41766300 Rr390657 1487 bp upstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs260173148
MGI SNP Detail		 Chr15:41766319 Rr390657 1468 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G T G G G G G G G G G G G G
rs51232459
MGI SNP Detail		 Chr15:41766330 Rr390657 1457 bp upstream
 SNP A/G G G A G
rs48857385
MGI SNP Detail		 Chr15:41766333 Rr390657 1454 bp upstream
 SNP A/G G G A G
rs262558176
MGI SNP Detail		 Chr15:41766363 Rr390657 1424 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs229871541
MGI SNP Detail		 Chr15:41766372 Rr390657 1415 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs47015889
MGI SNP Detail		 Chr15:41766439 Rr390657 1348 bp upstream
 SNP A/T A A T A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs214996685
MGI SNP Detail		 Chr15:41766450 Rr390657 1337 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs234568548
MGI SNP Detail		 Chr15:41766453 Rr390657 1334 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs247759886
MGI SNP Detail		 Chr15:41766455 Rr390657 1332 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs45674704
MGI SNP Detail		 Chr15:41766472 Rr390657 1315 bp upstream
 SNP C/T T T C T
rs51257096
MGI SNP Detail		 Chr15:41766503 Rr390657 1284 bp upstream
 SNP C/T T T C T
rs261571495
MGI SNP Detail		 Chr15:41766537 Rr390657 1250 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G G G G G G G G C G G G G G G G G G G G G
rs222528772
MGI SNP Detail		 Chr15:41766549 Rr390657 1238 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239110408
MGI SNP Detail		 Chr15:41766634 Rr390657 1153 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs585149528
MGI SNP Detail		 Chr15:41766672 Rr390657 1115 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs251318946
MGI SNP Detail		 Chr15:41766690 Rr390657 1097 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs586990137
MGI SNP Detail		 Chr15:41766755 Rr390657 1032 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33215637
MGI SNP Detail		 Chr15:41766790 Rr390657 997 bp upstream
 SNP A/G G A G A G G A
rs241004217
MGI SNP Detail		 Chr15:41766792 Rr390657 995 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs581359637
MGI SNP Detail		 Chr15:41766821 Rr390657 966 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253258138
MGI SNP Detail		 Chr15:41766822 Rr390657 965 bp upstream
 SNP A/G A G
rs260012135
MGI SNP Detail		 Chr15:41766883 Rr390657 904 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218233404
MGI SNP Detail		 Chr15:41766946 Rr390657 841 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs242498853
MGI SNP Detail		 Chr15:41766979 Rr390657 808 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T T T T T T T T G T T T T T T T T T T T T
rs265178097
MGI SNP Detail		 Chr15:41767015 Rr390657 772 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C T C C C C
rs231246177
MGI SNP Detail		 Chr15:41767075 Rr390657 712 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs257682988
MGI SNP Detail		 Chr15:41767098 Rr390657 689 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs258802843
MGI SNP Detail		 Chr15:41767099 Rr390657 688 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs227777386
MGI SNP Detail		 Chr15:41767113 Rr390657 674 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs48782024
MGI SNP Detail		 Chr15:41767126 Rr390657 661 bp upstream
 SNP C/T T C C T C
rs49482568
MGI SNP Detail		 Chr15:41767155 Rr390657 632 bp upstream
 SNP A/G A G G A G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs236102423
MGI SNP Detail		 Chr15:41767172 Rr390657 615 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs249750937
MGI SNP Detail		 Chr15:41767220 Rr390657 567 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C T C C C C
rs51812450
MGI SNP Detail		 Chr15:41767257 Rr390657 530 bp upstream
 SNP C/T T C C T C
rs49929091
MGI SNP Detail		 Chr15:41767262 Rr390657 525 bp upstream
 SNP A/C/T T C C A C
rs45642945
MGI SNP Detail		 Chr15:41767263 Rr390657 524 bp upstream
 SNP G/T G T T G T
rs51988488
MGI SNP Detail		 Chr15:41767284 Rr390657 503 bp upstream
 SNP A/C/T T C C A C
rs50101018
MGI SNP Detail		 Chr15:41767289 Rr390657 498 bp upstream
 SNP G/T T G G T G
rs253383503
MGI SNP Detail		 Chr15:41767330 Rr390657 457 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220605643
MGI SNP Detail		 Chr15:41767365 Rr390657 422 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C T C C C C
rs52013197
MGI SNP Detail		 Chr15:41767366 Rr390657 421 bp upstream
 SNP A/G G A A G A
rs48001218
MGI SNP Detail		 Chr15:41767377 Rr390657 410 bp upstream
 SNP C/T C T T C T
rs46648704
MGI SNP Detail		 Chr15:41767412 Rr390657 375 bp upstream
 SNP A/G A G G A G
rs49338168
MGI SNP Detail		 Chr15:41767437 Rr390657 350 bp upstream
 SNP C/T C T T C T
rs260249710
MGI SNP Detail		 Chr15:41767501 Rr390657 286 bp upstream
 SNP A/C/T A A A A A A A A A A A A A A A A A A A A A A C A A A A T A A A A A A A A A A A A C A A A A A A A A A A A A
rs227857997
MGI SNP Detail		 Chr15:41767510 Rr390657 277 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A A A A A A A A C A A A A A A A A A A A A
rs47199845
MGI SNP Detail		 Chr15:41767527 Rr390657 260 bp upstream
 SNP C/T T C C T C
rs46663779
MGI SNP Detail		 Chr15:41767546 Rr390657 241 bp upstream
 SNP A/G A G G A G
rs50845610
MGI SNP Detail		 Chr15:41767552 Rr390657 235 bp upstream
 SNP G/T G T T G T
rs51868760
MGI SNP Detail		 Chr15:41767594 Rr390657 193 bp upstream
 SNP A/T A T T A T
rs50362822
MGI SNP Detail		 Chr15:41767628 Rr390657 159 bp upstream
 SNP A/G G G A
rs108929949
MGI SNP Detail		 Chr15:41767634 Rr390657 153 bp upstream
 SNP A/T A T T
rs48430422
MGI SNP Detail		 Chr15:41767686 Rr390657 101 bp upstream
 SNP A/T A T T
rs245280934
MGI SNP Detail		 Chr15:41767704 Rr390657 83 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215897898
MGI SNP Detail		 Chr15:41767717 Rr390657 70 bp upstream
 SNP A/G G G G A G A G G A G G G G G G G A A G G A G G A A A A G G G G G A G A G A A A G G G G G A G G A G G G G G
rs47332271
MGI SNP Detail		 Chr15:41767729 Rr390657 58 bp upstream
 SNP C/T C T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs253237809
MGI SNP Detail		 Chr15:41767746 Rr390657 41 bp upstream
 SNP C/T T T T C T C T T C T T T T T T T C C T T C T C C C C C T T T T T C C C T C C C T T T T T C T T C C T T T T
rs212292299
MGI SNP Detail		 Chr15:41767761 Rr390657 26 bp upstream
 SNP A/G A A A G A G A A G A A A A A A A G G A A G A A G G G G A A A A A G A G A G G G A A A A A G A A G A A A A A
rs253380466
MGI SNP Detail		 Chr15:41767824 Rr390657 within coordinates of
 SNP C/T C T
rs216737019
MGI SNP Detail		 Chr15:41767840 Rr390657 within coordinates of
 SNP A/G G A
rs50255154
MGI SNP Detail		 Chr15:41767859 Rr390657 within coordinates of
 SNP C/T C T
rs253978817
MGI SNP Detail		 Chr15:41767877 Rr390657 within coordinates of
 SNP A/G A A A G A G G G G A A A G G G G G G G A G G A G G G G A A A G A G G G A G G G A A G A G G G G G G G A A G
rs223049540
MGI SNP Detail		 Chr15:41767891 Rr390657 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243084920
MGI SNP Detail		 Chr15:41767917 Rr390657 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264271836
MGI SNP Detail		 Chr15:41767977 Rr390657 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs46085280
MGI SNP Detail		 Chr15:41768043 Rr390657 within coordinates of
 SNP C/T T C
rs45753272
MGI SNP Detail		 Chr15:41768068 Rr390657 within coordinates of
 SNP A/T A T T A T
rs46444104
MGI SNP Detail		 Chr15:41768095 Rr390657 within coordinates of
 SNP C/T T T T C T
rs230827630
MGI SNP Detail		 Chr15:41768117 Rr390657 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs49388063
MGI SNP Detail		 Chr15:41768132 Rr390657 within coordinates of
 SNP A/G A G G A G
rs46551461
MGI SNP Detail		 Chr15:41768155 Rr390657 within coordinates of
 SNP A/G G A A G A
rs45802573
MGI SNP Detail		 Chr15:41768173 Rr390657 within coordinates of
 SNP A/C A C C A C
rs212106065
MGI SNP Detail		 Chr15:41768202 Rr390657 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A A A A
rs237316249
MGI SNP Detail		 Chr15:41768205 Rr390657 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G A G G G G
rs48179656
MGI SNP Detail		 Chr15:41768238 Rr390657 within coordinates of
 SNP A/G A G G
rs215361710
MGI SNP Detail		 Chr15:41768267 Rr390657 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C
rs51129578
MGI SNP Detail		 Chr15:41768268 Rr390657 within coordinates of
 SNP C/G G C C G C
rs253874754
MGI SNP Detail		 Chr15:41768269 Rr390657 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A A A A
rs222938472
MGI SNP Detail		 Chr15:41768412 Rr390657 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs50346163
MGI SNP Detail		 Chr15:41768423 Rr390657 within coordinates of
 SNP C/T T C C
rs225750657
MGI SNP Detail		 Chr15:41768443 Rr390657 within coordinates of
 SNP C/T T C
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Showing SNP(s) 1 - 100 of 247
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory