About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID 		Rr392356
regulatory region 392356
MGI:7688468

<< first < prev1 next > last >>
Showing SNP(s) 1 - 75 of 75

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs238548874
MGI SNP Detail		 Chr17:17667025 Lix1 within coordinates of
Rr392356 1698 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256725053
MGI SNP Detail		 Chr17:17667083 Lix1 within coordinates of
Rr392356 1640 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs224222441
MGI SNP Detail		 Chr17:17667116 Lix1 within coordinates of
Rr392356 1607 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A C A A A A
rs248654036
MGI SNP Detail		 Chr17:17667123 Lix1 within coordinates of
Rr392356 1600 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs217907922
MGI SNP Detail		 Chr17:17667176 Lix1 within coordinates of
Rr392356 1547 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs108812681
MGI SNP Detail		 Chr17:17667258 Lix1 within coordinates of
Rr392356 1465 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs252407017
MGI SNP Detail		 Chr17:17667341 Lix1 within coordinates of
Rr392356 1382 bp upstream
 SNP A/G G G G G A G G G G G G G G G G G G G G G G A G G G A G G G A G G A G G G A G G G G G G G A G G G G G G G G
rs215371994
MGI SNP Detail		 Chr17:17667478 Lix1 within coordinates of
Rr392356 1245 bp upstream
 SNP C/T C C C C C C C C C C C C C C C T T T C C C T C C C C T C C C C C C C C C C T T C C C C C C C C C C C C
rs231451445
MGI SNP Detail		 Chr17:17667557 Lix1 within coordinates of
Rr392356 1166 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33757304
MGI SNP Detail		 Chr17:17667566 Lix1 within coordinates of
Rr392356 1157 bp upstream
 SNP C/T C T C T C C C C C T C
rs212434817
MGI SNP Detail		 Chr17:17667572 Lix1 within coordinates of
Rr392356 1151 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs107842378
MGI SNP Detail		 Chr17:17667637 Lix1 within coordinates of
Rr392356 1086 bp upstream
 SNP A/G G A
rs263916098
MGI SNP Detail		 Chr17:17667690 Lix1 within coordinates of
Rr392356 1033 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C T T T C C C T C C C C T C C C C C C C C C C T C C C C C C C C C C C C
rs225200392
MGI SNP Detail		 Chr17:17667705 Lix1 within coordinates of
Rr392356 1018 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240321170
MGI SNP Detail		 Chr17:17667733 Lix1 within coordinates of
Rr392356 990 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G A A A G G G A G G G G A G G G G G G G G G G A G G G G G G G G G G G G
rs258396829
MGI SNP Detail		 Chr17:17667747 Lix1 within coordinates of
Rr392356 976 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs220082688
MGI SNP Detail		 Chr17:17667822 Lix1 within coordinates of
Rr392356 901 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs238520664
MGI SNP Detail		 Chr17:17667844 Lix1 within coordinates of
Rr392356 879 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs256494925
MGI SNP Detail		 Chr17:17667924 Lix1 within coordinates of
Rr392356 799 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33756403
MGI SNP Detail		 Chr17:17667970 Lix1 within coordinates of
Rr392356 753 bp upstream
 SNP C/G G G G G C G G G G G G G C G
rs248354122
MGI SNP Detail		 Chr17:17668039 Lix1 within coordinates of
Rr392356 684 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs107609681
MGI SNP Detail		 Chr17:17668162 Lix1 within coordinates of
Rr392356 561 bp upstream
 SNP G/T G T
rs33756402
MGI SNP Detail		 Chr17:17668170 Lix1 within coordinates of
Rr392356 553 bp upstream
 SNP C/T C C T C C C C T C C C C C C
rs223643361
MGI SNP Detail		 Chr17:17668268 Lix1 within coordinates of
Rr392356 455 bp upstream
 SNP A/G G A
rs584998574
MGI SNP Detail		 Chr17:17668381 Lix1 within coordinates of
Rr392356 342 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs578930467
MGI SNP Detail		 Chr17:17668438 Lix1 within coordinates of
Rr392356 285 bp upstream
 SNP A/C A A A A A A A A A A A A A A A C C C A A A C A A A A C A A A A A A A A A A A C C A A A A A A A C A A A A
rs256487059
MGI SNP Detail		 Chr17:17668459 Lix1 within coordinates of
Rr392356 264 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A T A A A A
rs582935273
MGI SNP Detail		 Chr17:17668481 Lix1 within coordinates of
Rr392356 242 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T C T T T T
rs47485878
MGI SNP Detail		 Chr17:17668614 Lix1 within coordinates of
Rr392356 109 bp upstream
 SNP A/C A A C
rs225521772
MGI SNP Detail		 Chr17:17668797 Lix1 within coordinates of
Rr392356 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33756401
MGI SNP Detail		 Chr17:17668924 Lix1 within coordinates of
Rr392356 within coordinates of
 SNP A/G A A G A A G A A A A A G A
rs212202357
MGI SNP Detail		 Chr17:17668975 Lix1 within coordinates of
Rr392356 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A G G G A A A G A A A A G A A A A A A A A A A A G G A A A A A A A G A A A A
rs235271543
MGI SNP Detail		 Chr17:17669001 Lix1 within coordinates of
Rr392356 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs254246435
MGI SNP Detail		 Chr17:17669075 Lix1 within coordinates of
Rr392356 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A T T T A A A T A A A A T A A A A A A A A A A A T T A A A A A A A T A A A A
rs217609307
MGI SNP Detail		 Chr17:17669118 Lix1 within coordinates of
Rr392356 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238127332
MGI SNP Detail		 Chr17:17669175 Lix1 within coordinates of
Rr392356 within coordinates of
Tssr142794 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T C C C T T T C T T T T C T T T T T T T T T T T C C T T T T T T T C T T T T
rs262620372
MGI SNP Detail		 Chr17:17669230 Lix1 within coordinates of
Rr392356 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C T T T C C C T C C C C T C C C C C C C C C C C T T C C C C C C C T C C C C
rs220045969
MGI SNP Detail		 Chr17:17669256 Lix1 within coordinates of
Rr392356 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs231472689
MGI SNP Detail		 Chr17:17669314 Lix1 within coordinates of
Rr392356 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T
rs250104827
MGI SNP Detail		 Chr17:17669336 Lix1 within coordinates of
Rr392356 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs217822942
MGI SNP Detail		 Chr17:17669592 Lix1 within coordinates of
Rr392356 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250771421
MGI SNP Detail		 Chr17:17669726 Lix1 within coordinates of
Rr392356 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G
rs108120431
MGI SNP Detail		 Chr17:17669825 Lix1 within coordinates of
Rr392356 within coordinates of
 SNP C/T C T
rs225213754
MGI SNP Detail		 Chr17:17669946 Lix1 within coordinates of
Rr392356 93 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C
rs245045133
MGI SNP Detail		 Chr17:17669994 Lix1 within coordinates of
Rr392356 141 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs256217338
MGI SNP Detail		 Chr17:17670100 Lix1 within coordinates of
Rr392356 247 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T G G G T T T G T T T T G T T T T T G T T T T T G G T T T T T T T G T T T T
rs225487959
MGI SNP Detail		 Chr17:17670101 Lix1 within coordinates of
Rr392356 248 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243191774
MGI SNP Detail		 Chr17:17670102 Lix1 within coordinates of
Rr392356 249 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254062413
MGI SNP Detail		 Chr17:17670144 Lix1 within coordinates of
Rr392356 291 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs233908000
MGI SNP Detail		 Chr17:17670149 Lix1 within coordinates of
Rr392356 296 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs259285226
MGI SNP Detail		 Chr17:17670177 Lix1 within coordinates of
Rr392356 324 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C T
rs217246345
MGI SNP Detail		 Chr17:17670215 Lix1 within coordinates of
Rr392356 362 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs578444245
MGI SNP Detail		 Chr17:17670235 Lix1 within coordinates of
Rr392356 382 bp downstream
 SNP A/G A A A A A A A A A A A A A A G G G A A A G A A A A G A A A A A G A A A A A G A A A A A A A A A A A
rs232627259
MGI SNP Detail		 Chr17:17670334 Lix1 within coordinates of
Rr392356 481 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs108209798
MGI SNP Detail		 Chr17:17670410 Lix1 within coordinates of
Rr392356 557 bp downstream
 SNP C/G G C
rs213956710
MGI SNP Detail		 Chr17:17670514 Lix1 within coordinates of
Rr392356 661 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230993738
MGI SNP Detail		 Chr17:17670539 Lix1 within coordinates of
Rr392356 686 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs250158690
MGI SNP Detail		 Chr17:17670540 Lix1 within coordinates of
Rr392356 687 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs211851689
MGI SNP Detail		 Chr17:17670544 Lix1 within coordinates of
Rr392356 691 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A
rs239962954
MGI SNP Detail		 Chr17:17670564 Lix1 within coordinates of
Rr392356 711 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263639657
MGI SNP Detail		 Chr17:17670573 Lix1 within coordinates of
Rr392356 720 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs224944710
MGI SNP Detail		 Chr17:17670602 Lix1 within coordinates of
Rr392356 749 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs247836993
MGI SNP Detail		 Chr17:17670603 Lix1 within coordinates of
Rr392356 750 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs250466073
MGI SNP Detail		 Chr17:17670807 Lix1 within coordinates of
Rr392356 954 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A
rs219237852
MGI SNP Detail		 Chr17:17670816 Lix1 within coordinates of
Rr392356 963 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs236585780
MGI SNP Detail		 Chr17:17670830 Lix1 within coordinates of
Rr392356 977 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T
rs108475674
MGI SNP Detail		 Chr17:17670889 Lix1 within coordinates of
Rr392356 1036 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs235187018
MGI SNP Detail		 Chr17:17671354 Lix1 within coordinates of
Rr392356 1501 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs247508537
MGI SNP Detail		 Chr17:17671369 Lix1 within coordinates of
Rr392356 1516 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs265743907
MGI SNP Detail		 Chr17:17671524 Lix1 within coordinates of
Rr392356 1671 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231988213
MGI SNP Detail		 Chr17:17671559 Lix1 within coordinates of
Rr392356 1706 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs246029307
MGI SNP Detail		 Chr17:17671564 Lix1 within coordinates of
Rr392356 1711 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A G G G A A A G A A A A G A A A A A A A A A A A G G A A A A A A A G A A A A
rs214004821
MGI SNP Detail		 Chr17:17671568 Lix1 within coordinates of
Rr392356 1715 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs225200835
MGI SNP Detail		 Chr17:17671639 Lix1 within coordinates of
Rr392356 1786 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T C C C T T T C T T T T C T T T T T T T T T T T C T T T T T T T T C T T T T
rs108672315
MGI SNP Detail		 Chr17:17671718 Lix1 within coordinates of
Rr392356 1865 bp downstream
 SNP A/G G G G G A G G G G G G G G G G G G G G A G A G G G A G G G A G G A G G G A G G G G G G G A G G G G G G G G
<< first < prev1 next > last >>
Showing SNP(s) 1 - 75 of 75
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory