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Mouse SNP Summary
Symbol
Name
ID 		Rr393555
regulatory region 393555
MGI:7689667

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs258301549
MGI SNP Detail		 Chr18:37748349 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 1974 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C C C C C C C T C C C C C C C C C C C C C C T C C C C
rs214053250
MGI SNP Detail		 Chr18:37748356 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 1967 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A G A A A A
rs239168588
MGI SNP Detail		 Chr18:37748396 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 1927 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C
rs249076178
MGI SNP Detail		 Chr18:37748407 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 1916 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs212761338
MGI SNP Detail		 Chr18:37748418 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 1905 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T C T T T T
rs234129453
MGI SNP Detail		 Chr18:37748503 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 1820 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T T T T T T T G T T T T T T T T T T T T T T G T T T T
rs253168324
MGI SNP Detail		 Chr18:37748533 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 1790 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G C G G G G G G G G G G G G G G C G G G G
rs220699470
MGI SNP Detail		 Chr18:37748582 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 1741 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T C T T T T
rs238376383
MGI SNP Detail		 Chr18:37748600 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 1723 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs261819522
MGI SNP Detail		 Chr18:37748613 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 1710 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A G A A A A
rs223174424
MGI SNP Detail		 Chr18:37748621 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 1702 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C G C C C C C C C C C C C C C C G C C C C
rs243725749
MGI SNP Detail		 Chr18:37748660 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 1663 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C T C C C C
rs256331998
MGI SNP Detail		 Chr18:37748740 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 1583 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A G A A A A A A A A A A A A A G A A A
rs219115166
MGI SNP Detail		 Chr18:37748751 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 1572 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T A T T T T T T T T T T T T T A T T T
rs242226937
MGI SNP Detail		 Chr18:37748759 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 1564 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs261572543
MGI SNP Detail		 Chr18:37748769 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 1554 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs232545371
MGI SNP Detail		 Chr18:37748776 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 1547 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T C T T T T
rs253274123
MGI SNP Detail		 Chr18:37748781 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 1542 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265089144
MGI SNP Detail		 Chr18:37748785 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 1538 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231116255
MGI SNP Detail		 Chr18:37748789 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 1534 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs585117985
MGI SNP Detail		 Chr18:37748801 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 1522 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G A G G G G
rs587505280
MGI SNP Detail		 Chr18:37748821 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 1502 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T C T T T T
rs242482647
MGI SNP Detail		 Chr18:37748835 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 1488 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A G A A A A
rs213025275
MGI SNP Detail		 Chr18:37748847 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 1476 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs234190268
MGI SNP Detail		 Chr18:37748873 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 1450 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs247288192
MGI SNP Detail		 Chr18:37748895 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 1428 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T A T T T T T T T T T T T T T T A T T T T
rs215187395
MGI SNP Detail		 Chr18:37748914 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 1409 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A T A A A A A A A A A A A A A A T A A A A
rs240992314
MGI SNP Detail		 Chr18:37749011 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 1312 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs256809980
MGI SNP Detail		 Chr18:37749037 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 1286 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A G A A A A
rs222742830
MGI SNP Detail		 Chr18:37749039 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 1284 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C T C C C C
rs234281647
MGI SNP Detail		 Chr18:37749068 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 1255 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T G T T T T T T T T T T T T T T G T T T T
rs250211417
MGI SNP Detail		 Chr18:37749069 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 1254 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G C G G G G G G G G G G G G G G C G G G G
rs222414106
MGI SNP Detail		 Chr18:37749070 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 1253 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T A T T T T T T T T T T T T T T A T T T T
rs242285407
MGI SNP Detail		 Chr18:37749071 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 1252 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A T A A A A A A A A A A A A A A T A A A A
rs255503056
MGI SNP Detail		 Chr18:37749163 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 1160 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C
rs224602523
MGI SNP Detail		 Chr18:37749194 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 1129 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T
rs249611411
MGI SNP Detail		 Chr18:37749219 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 1104 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T
rs262540299
MGI SNP Detail		 Chr18:37749220 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 1103 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G
rs581348689
MGI SNP Detail		 Chr18:37749232 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 1091 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A C A A A A A A A A A A A A A A C A A A A
rs231274761
MGI SNP Detail		 Chr18:37749303 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 1020 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G A G G G G
rs235907022
MGI SNP Detail		 Chr18:37749320 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 1003 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T G T T T T T T T T T T T T T T G T T T T
rs254792902
MGI SNP Detail		 Chr18:37749326 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 997 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C T C C C C
rs228629836
MGI SNP Detail		 Chr18:37749329 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 994 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C A C C C C C C C C C C C C C C A C C C C
rs247342674
MGI SNP Detail		 Chr18:37749337 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 986 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A C A A A A A A A A A A A A A A C A A A A
rs216009416
MGI SNP Detail		 Chr18:37749373 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 950 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs584985520
MGI SNP Detail		 Chr18:37749379 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 944 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C T C C C C
rs232401168
MGI SNP Detail		 Chr18:37749384 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 939 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T
rs255240699
MGI SNP Detail		 Chr18:37749400 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 923 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs214690984
MGI SNP Detail		 Chr18:37749417 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 906 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T A T T T T T T T T T T T T T T A T T T T
rs229683942
MGI SNP Detail		 Chr18:37749419 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 904 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs250079398
MGI SNP Detail		 Chr18:37749425 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 898 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T G T T T T T T T T T T T T T T G T T T T
rs216500184
MGI SNP Detail		 Chr18:37749433 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 890 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G A G G G G
rs236144736
MGI SNP Detail		 Chr18:37749449 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 874 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs255571311
MGI SNP Detail		 Chr18:37749455 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 868 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A G A A A A
rs224541743
MGI SNP Detail		 Chr18:37749509 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 814 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C A C C C C C C C C C C C C C C A C C C C
rs246688040
MGI SNP Detail		 Chr18:37749533 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 790 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262219532
MGI SNP Detail		 Chr18:37749568 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 755 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T C T T T T
rs223800679
MGI SNP Detail		 Chr18:37749581 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 742 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G A G G G G
rs235973395
MGI SNP Detail		 Chr18:37749600 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 723 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C T C C C C
rs254679746
MGI SNP Detail		 Chr18:37749611 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 712 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T C T T T T
rs228696530
MGI SNP Detail		 Chr18:37749624 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 699 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G T G G G G G G G G G G G G G G T G G G G
rs241730650
MGI SNP Detail		 Chr18:37749629 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 694 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A G A A A A
rs263245053
MGI SNP Detail		 Chr18:37749640 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 683 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A G A A A A
rs232948367
MGI SNP Detail		 Chr18:37749646 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 677 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G A G G G G
rs250549768
MGI SNP Detail		 Chr18:37749655 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 668 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A G A A A A
rs215144775
MGI SNP Detail		 Chr18:37749672 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 651 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A G A A A A
rs224162231
MGI SNP Detail		 Chr18:37749705 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 618 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G A G G G G
rs244003157
MGI SNP Detail		 Chr18:37749718 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 605 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C
rs216381678
MGI SNP Detail		 Chr18:37749730 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 593 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs236005533
MGI SNP Detail		 Chr18:37749767 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 556 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs262778538
MGI SNP Detail		 Chr18:37749838 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 485 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G
rs216372773
MGI SNP Detail		 Chr18:37749849 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 474 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A
rs241468852
MGI SNP Detail		 Chr18:37749881 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 442 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs257327536
MGI SNP Detail		 Chr18:37749917 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 406 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220398788
MGI SNP Detail		 Chr18:37749933 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 390 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T T T T T T T C T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs230328077
MGI SNP Detail		 Chr18:37750101 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 222 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs249023556
MGI SNP Detail		 Chr18:37750136 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 187 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A
rs222014758
MGI SNP Detail		 Chr18:37750203 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 120 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A G A A A A A A A A A A A A A A G A A A A
rs241592470
MGI SNP Detail		 Chr18:37750258 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 65 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T
rs265554667
MGI SNP Detail		 Chr18:37750263 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 60 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A
rs225119673
MGI SNP Detail		 Chr18:37750269 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 54 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245851373
MGI SNP Detail		 Chr18:37750416 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G G G G G G G C G G G G G G G G G G G G G G C G G G G
rs262708842
MGI SNP Detail		 Chr18:37750436 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A A G A A A A A A A A A A A A A A G A A A A
rs224234081
MGI SNP Detail		 Chr18:37750512 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A A A A A A A T A A A A A A A A A A A A A A T A A A A
rs244257346
MGI SNP Detail		 Chr18:37750580 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T T T T T T T C T T T T T T T T T T T T T T C T T T T
rs260582829
MGI SNP Detail		 Chr18:37750600 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs228952596
MGI SNP Detail		 Chr18:37750621 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T T T T T T T C T T T T T T T T T T T T T T C T T T T
rs251931225
MGI SNP Detail		 Chr18:37750662 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T T T T T T T C T T T T T T T T T T T T T T C T T T T
rs216932184
MGI SNP Detail		 Chr18:37750682 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs235943975
MGI SNP Detail		 Chr18:37750699 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T
rs255657364
MGI SNP Detail		 Chr18:37750719 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A
rs214673394
MGI SNP Detail		 Chr18:37750748 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31768069
MGI SNP Detail		 Chr18:37750754 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 within coordinates of
 SNP A/T T T T T T T A T T T A T T T T
rs31768068
MGI SNP Detail		 Chr18:37750778 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 within coordinates of
 SNP A/G G G G G G G A G G A G G G G
rs222244877
MGI SNP Detail		 Chr18:37750873 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C
rs243167162
MGI SNP Detail		 Chr18:37750875 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258699332
MGI SNP Detail		 Chr18:37750876 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs225450435
MGI SNP Detail		 Chr18:37750880 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T T T T T T T G T T T T T T T T T T T T T T G T T T T
rs31768067
MGI SNP Detail		 Chr18:37750917 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 within coordinates of
 SNP C/T C C C C C C T C C T C C C C
rs31768066
MGI SNP Detail		 Chr18:37750989 Gm37388 within coordinates of
Gm38666 within coordinates of
Gm38667 within coordinates of
Gm58529 within coordinates of
Pcdha4b within coordinates of
Rr393555 within coordinates of
 SNP C/T C C C C C C T C C T C C C C
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Showing SNP(s) 1 - 100 of 170
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory