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Mouse SNP Summary
Symbol
Name
ID 		Rr396032
regulatory region 396032
MGI:7692144

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Showing SNP(s) 1 - 61 of 61

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs230742624
MGI SNP Detail
Alliance Variant		 Chr1:52270317 Gls Intron
Gls Noncoding-Transcript-Variant
Rr396032 2000 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256718162
MGI SNP Detail
Alliance Variant		 Chr1:52270329 Gls Intron
Gls Noncoding-Transcript-Variant
Rr396032 1988 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs222751908
MGI SNP Detail
Alliance Variant		 Chr1:52270429 Gls Intron
Gls Noncoding-Transcript-Variant
Rr396032 1888 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs213430548
MGI SNP Detail
Alliance Variant		 Chr1:52270430 Gls Intron
Gls Noncoding-Transcript-Variant
Rr396032 1887 bp upstream
 SNP C/G C G
rs263230371
MGI SNP Detail
Alliance Variant		 Chr1:52270436 Gls Intron
Gls Noncoding-Transcript-Variant
Rr396032 1881 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs222470082
MGI SNP Detail
Alliance Variant		 Chr1:52270438 Gls Intron
Gls Noncoding-Transcript-Variant
Rr396032 1879 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs579603590
MGI SNP Detail
Alliance Variant		 Chr1:52270486 Gls Intron
Gls Noncoding-Transcript-Variant
Rr396032 1831 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242247432
MGI SNP Detail
Alliance Variant		 Chr1:52270517 Gls Intron
Gls Noncoding-Transcript-Variant
Rr396032 1800 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs38260202
MGI SNP Detail
Alliance Variant		 Chr1:52270524 Gls Intron
Gls Noncoding-Transcript-Variant
Rr396032 1793 bp upstream
 SNP A/T T T T T A T A T T A T A T A A A
rs36424705
MGI SNP Detail
Alliance Variant		 Chr1:52270570 Gls Intron
Gls Noncoding-Transcript-Variant
Rr396032 1747 bp upstream
 SNP A/G A A A A G A A A A G G A A G A
rs245482345
MGI SNP Detail
Alliance Variant		 Chr1:52270574 Gls Intron
Gls Noncoding-Transcript-Variant
Rr396032 1743 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs262392077
MGI SNP Detail
Alliance Variant		 Chr1:52270579 Gls Intron
Gls Noncoding-Transcript-Variant
Rr396032 1738 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs37301711
MGI SNP Detail
Alliance Variant		 Chr1:52270676 Gls Intron
Gls Noncoding-Transcript-Variant
Rr396032 1641 bp upstream
 SNP A/G A A A A G A G A A G A G A G G G G
rs252370160
MGI SNP Detail
Alliance Variant		 Chr1:52270759 Gls Intron
Gls Noncoding-Transcript-Variant
Rr396032 1558 bp upstream
Rr410827 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs37681842
MGI SNP Detail
Alliance Variant		 Chr1:52271052 Gls Intron
Gls Noncoding-Transcript-Variant
Rr396032 1265 bp upstream
Rr410827 within coordinates of
 SNP C/T C C C C T C C C C T T C C T C
rs36424968
MGI SNP Detail
Alliance Variant		 Chr1:52271114 Cpgi242 within coordinates of
Gls Intron
Gls Noncoding-Transcript-Variant
Rr396032 1203 bp upstream
Rr410827 within coordinates of
 SNP A/T A A A A A A A A A A A A A A T
rs247312385
MGI SNP Detail
Alliance Variant		 Chr1:52271144 Cpgi242 within coordinates of
Gls Intron
Gls Noncoding-Transcript-Variant
Rr396032 1173 bp upstream
Rr410827 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs36716085
MGI SNP Detail
Alliance Variant		 Chr1:52271167 Cpgi242 within coordinates of
Gls Intron
Gls Noncoding-Transcript-Variant
Rr396032 1150 bp upstream
Rr410827 within coordinates of
 SNP G/T T T T T G T T T T G G T T G T
rs37105238
MGI SNP Detail
Alliance Variant		 Chr1:52271182 Cpgi242 within coordinates of
Gls Intron
Gls Noncoding-Transcript-Variant
Rr396032 1135 bp upstream
Rr410827 within coordinates of
 SNP C/T C C C C C C C C C C C C C T C
rs227167423
MGI SNP Detail
Alliance Variant		 Chr1:52271208 Cpgi242 within coordinates of
Gls Intron
Gls Noncoding-Transcript-Variant
Rr396032 1109 bp upstream
Rr410827 within coordinates of
 SNP C/T C T
rs242476439
MGI SNP Detail
Alliance Variant		 Chr1:52271320 Cpgi242 within coordinates of
Gls Intron
Gls mRNA-UTR
Gls Noncoding-Transcript-Variant
Rr396032 997 bp upstream
Rr410827 within coordinates of
 SNP C/T T C
rs239536054
MGI SNP Detail
Alliance Variant		 Chr1:52271429 Cpgi242 within coordinates of
Gls Intron
Gls mRNA-UTR
Gls Noncoding-Transcript-Variant
Rr396032 888 bp upstream
Rr410827 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs253338659
MGI SNP Detail
Alliance Variant		 Chr1:52271452 Cpgi242 within coordinates of
Gls Intron
Gls mRNA-UTR
Gls Noncoding-Transcript-Variant
Rr396032 865 bp upstream
Rr410828 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs222448413
MGI SNP Detail
Alliance Variant		 Chr1:52271474 Cpgi242 within coordinates of
Gls Intron
Gls Noncoding-Transcript-Variant
Rr396032 843 bp upstream
Rr410828 within coordinates of
 SNP A/G G G G G G G G G A G G G G G G G G G G A G G A G G G G A A G G A G A G G G G G G A G G G G G G G G G G G
rs236160232
MGI SNP Detail
Alliance Variant		 Chr1:52271486 Cpgi242 within coordinates of
Gls Intron
Gls Noncoding-Transcript-Variant
Rr396032 831 bp upstream
Rr410828 within coordinates of
 SNP C/T C C C C C C C C T C C C C C C C C C C C C C T C C C C T T C C T C T C C C C C C T C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs255486235
MGI SNP Detail
Alliance Variant		 Chr1:52271543 Cpgi242 within coordinates of
Gls Intron
Gls Noncoding-Transcript-Variant
Rr396032 774 bp upstream
Rr410828 within coordinates of
 SNP C/T C C C C C C C T C C C C C C C C C C C C C T C C C C T T C C T C T C C C C C C T C C C C C C T C C C
rs218414440
MGI SNP Detail
Alliance Variant		 Chr1:52271554 Cpgi242 within coordinates of
Gls Intron
Gls Noncoding-Transcript-Variant
Rr396032 763 bp upstream
Rr410828 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C
rs259832486
MGI SNP Detail
Alliance Variant		 Chr1:52271684 Cpgi242 within coordinates of
Gls Intron
Gls Noncoding-Transcript-Variant
Rr396032 633 bp upstream
Rr410828 within coordinates of
 SNP A/T A T
rs265165666
MGI SNP Detail
Alliance Variant		 Chr1:52272068 Cpgi242 within coordinates of
Gls Coding-Synonymous
Gls mRNA-UTR
Rr396032 249 bp upstream
 SNP A/C C C C C C C A C C C C C C C C C C A C C C A A C A C C C C C C C A C C C C C C C C C C
rs223846960
MGI SNP Detail
Alliance Variant		 Chr1:52272152 Cpgi242 within coordinates of
Gls mRNA-UTR
Rr396032 165 bp upstream
Tssr11599 within coordinates of
 SNP A/G A A A A A A G A A A A A A A A A A G A A G A A A A G G A G A G A A A A A A G A A A A A A A G A A A A
rs247893831
MGI SNP Detail
Alliance Variant		 Chr1:52272284 Cpgi242 within coordinates of
Gls mRNA-UTR
Rr396032 33 bp upstream
 SNP A/C C C C C C C A C C C C C C C C C C C C C A C C C C A A C A C A C C C C C C A C C C C C C C C C C C
rs258231642
MGI SNP Detail
Alliance Variant		 Chr1:52272288 Cpgi242 within coordinates of
Gls mRNA-UTR
Rr396032 29 bp upstream
 SNP G/T G G G G G G T G G G G G G G G G G G G G T G G G G T T G T G T G G G G G G T G G G G G G G G G G
rs228602314
MGI SNP Detail
Alliance Variant		 Chr1:52272478 Cpgi242 within coordinates of
Gls mRNA-UTR
Rr396032 within coordinates of
Rr410829 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G G A
rs224348313
MGI SNP Detail
Alliance Variant		 Chr1:52272508 Cpgi242 within coordinates of
Gls mRNA-UTR
Rr396032 within coordinates of
Rr410829 within coordinates of
 SNP A/C A C
rs253760462
MGI SNP Detail
Alliance Variant		 Chr1:52272538 Cpgi242 within coordinates of
Gls mRNA-UTR
Rr396032 within coordinates of
Rr410829 within coordinates of
 SNP A/G A A A A A A A A G A A A A A A A A A A G A A G A A A A G G G A G A A A A A A G A A A A A A G A G G
rs229105104
MGI SNP Detail
Alliance Variant		 Chr1:52272697 Cpgi242 within coordinates of
Gls mRNA-UTR
Rr396032 79 bp downstream
Rr410829 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250610700
MGI SNP Detail
Alliance Variant		 Chr1:52272805 Cpgi242 within coordinates of
Gls mRNA-UTR
Rr396032 187 bp downstream
Rr410829 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215093673
MGI SNP Detail
Alliance Variant		 Chr1:52272815 Cpgi242 within coordinates of
Gls mRNA-UTR
Rr396032 197 bp downstream
Rr410829 within coordinates of
 SNP C/T T T T T T T T T C T T T T T T T T T T C T T C T T T T C C T T C T C T T T T T T C T T T T T T C T T T T
rs231664421
MGI SNP Detail
Alliance Variant		 Chr1:52273253 Gls mRNA-UTR
Rr396032 635 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A A G
rs246911182
MGI SNP Detail
Alliance Variant		 Chr1:52273276 Gls mRNA-UTR
Rr396032 658 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs216395615
MGI SNP Detail
Alliance Variant		 Chr1:52273320 Gls mRNA-UTR
Rr396032 702 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236123370
MGI SNP Detail
Alliance Variant		 Chr1:52273408 Gls mRNA-UTR
Rr396032 790 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249403612
MGI SNP Detail
Alliance Variant		 Chr1:52273470 Gls mRNA-UTR
Rr396032 852 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G
rs212631747
MGI SNP Detail
Alliance Variant		 Chr1:52273516 Gls mRNA-UTR
Rr396032 898 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs237463124
MGI SNP Detail
Alliance Variant		 Chr1:52273575 Gls mRNA-UTR
Rr396032 957 bp downstream
 SNP C/G C C C C C C C C G C C C C C C C C C C C C C G C C C C G G C C G C G C C C C C C G C C C C C C C C C C C
rs257389342
MGI SNP Detail
Alliance Variant		 Chr1:52273648 Gls mRNA-UTR
Rr396032 1030 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs223607157
MGI SNP Detail
Alliance Variant		 Chr1:52273756 Gls mRNA-UTR
Rr396032 1138 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs239603810
MGI SNP Detail
Alliance Variant		 Chr1:52273785 Gls mRNA-UTR
Rr396032 1167 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C C T
rs251972012
MGI SNP Detail
Alliance Variant		 Chr1:52273836 Gls mRNA-UTR
Rr396032 1218 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222020313
MGI SNP Detail
Alliance Variant		 Chr1:52274137 Gls mRNA-UTR
Rr396032 1519 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs241700079
MGI SNP Detail		 Chr1:52274261 Rr396032 1643 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs254034371
MGI SNP Detail		 Chr1:52274344 Rr396032 1726 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs229054723
MGI SNP Detail		 Chr1:52274359 Rr396032 1741 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245803211
MGI SNP Detail		 Chr1:52274360 Rr396032 1742 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs262718805
MGI SNP Detail		 Chr1:52274391 Rr396032 1773 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs232051425
MGI SNP Detail		 Chr1:52274397 Rr396032 1779 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs247237906
MGI SNP Detail		 Chr1:52274443 Rr396032 1825 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs216359890
MGI SNP Detail		 Chr1:52274480 Rr396032 1862 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228920114
MGI SNP Detail		 Chr1:52274532 Rr396032 1914 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243247935
MGI SNP Detail		 Chr1:52274556 Rr396032 1938 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212972555
MGI SNP Detail		 Chr1:52274565 Rr396032 1947 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
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Showing SNP(s) 1 - 61 of 61
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
07/29/2025
MGI 6.24 		The Jackson Laboratory