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Mouse SNP Summary
Symbol
Name
ID 		Rr396245
regulatory region 396245
MGI:7692357

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs262449970
MGI SNP Detail		 Chr1:127384786 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr19047 within coordinates of
Rr396245 1968 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A
rs212144722
MGI SNP Detail		 Chr1:127384789 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr19047 within coordinates of
Rr396245 1965 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C
rs32632761
MGI SNP Detail		 Chr1:127384884 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr19047 within coordinates of
Rr396245 1870 bp upstream
 SNP G/T G T G
rs31869808
MGI SNP Detail		 Chr1:127384887 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr19047 within coordinates of
Rr396245 1867 bp upstream
 SNP A/G A G A
rs30707360
MGI SNP Detail		 Chr1:127384915 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr19047 within coordinates of
Rr396245 1839 bp upstream
 SNP A/G A G A
rs248214233
MGI SNP Detail		 Chr1:127384943 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr19047 within coordinates of
Rr396245 1811 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T A T T T T T T T A T T T T
rs259761834
MGI SNP Detail		 Chr1:127385016 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr396245 1738 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs222538622
MGI SNP Detail		 Chr1:127385027 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr396245 1727 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs586845529
MGI SNP Detail		 Chr1:127385050 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr396245 1704 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244588295
MGI SNP Detail		 Chr1:127385074 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr396245 1680 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T
rs256412944
MGI SNP Detail		 Chr1:127385121 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr396245 1633 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs223913614
MGI SNP Detail		 Chr1:127385145 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr396245 1609 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs237740616
MGI SNP Detail		 Chr1:127385146 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr396245 1608 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs579799405
MGI SNP Detail		 Chr1:127385154 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr396245 1600 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs260415102
MGI SNP Detail		 Chr1:127385170 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr396245 1584 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs583501393
MGI SNP Detail		 Chr1:127385188 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr396245 1566 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs37215449
MGI SNP Detail		 Chr1:127385225 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr396245 1529 bp upstream
 SNP C/T C C C C C T C C C T C C C C
rs257058815
MGI SNP Detail		 Chr1:127385249 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr396245 1505 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G C G G G G G G G C G G G G
rs216508464
MGI SNP Detail		 Chr1:127385289 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr396245 1465 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A
rs230096925
MGI SNP Detail		 Chr1:127385294 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr396245 1460 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T
rs244544302
MGI SNP Detail		 Chr1:127385341 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr396245 1413 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A
rs31997827
MGI SNP Detail		 Chr1:127385373 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr396245 1381 bp upstream
 SNP A/G G G G G G A G A A G G G A A
rs230756239
MGI SNP Detail		 Chr1:127385398 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr396245 1356 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs252692649
MGI SNP Detail		 Chr1:127385452 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr396245 1302 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T G T T T T T T T G T T T T
rs217421516
MGI SNP Detail		 Chr1:127385468 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr396245 1286 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs586542229
MGI SNP Detail		 Chr1:127385479 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr396245 1275 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238035102
MGI SNP Detail		 Chr1:127385487 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr396245 1267 bp upstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs263479407
MGI SNP Detail		 Chr1:127385513 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr396245 1241 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A
rs222828853
MGI SNP Detail		 Chr1:127385546 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr396245 1208 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A
rs580767073
MGI SNP Detail		 Chr1:127385569 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr396245 1185 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs584111300
MGI SNP Detail		 Chr1:127385590 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr396245 1164 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs247242237
MGI SNP Detail		 Chr1:127385618 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr30263 within coordinates of
Rr396245 1136 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249952810
MGI SNP Detail		 Chr1:127385623 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr30263 within coordinates of
Rr396245 1131 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219205260
MGI SNP Detail		 Chr1:127385640 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr30263 within coordinates of
Rr396245 1114 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A
rs237701849
MGI SNP Detail		 Chr1:127385694 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr30263 within coordinates of
Rr396245 1060 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs260387054
MGI SNP Detail		 Chr1:127385697 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr30263 within coordinates of
Rr396245 1057 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs234625005
MGI SNP Detail		 Chr1:127385751 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr30263 within coordinates of
Rr396245 1003 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs244891599
MGI SNP Detail		 Chr1:127385773 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr30263 within coordinates of
Rr396245 981 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C A C C C C C C C A C C C C
rs265668428
MGI SNP Detail		 Chr1:127385798 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr30263 within coordinates of
Rr396245 956 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229671180
MGI SNP Detail		 Chr1:127385811 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr30263 within coordinates of
Rr396245 943 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs244467227
MGI SNP Detail		 Chr1:127385821 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr30263 within coordinates of
Rr396245 933 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs212007918
MGI SNP Detail		 Chr1:127385919 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr30263 within coordinates of
Rr396245 835 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G T G G G G G G G T G G G G
rs587466396
MGI SNP Detail		 Chr1:127385921 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr30263 within coordinates of
Rr396245 833 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs224366757
MGI SNP Detail		 Chr1:127385924 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr30263 within coordinates of
Rr396245 830 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T
rs31852506
MGI SNP Detail		 Chr1:127385971 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr30263 within coordinates of
Rr396245 783 bp upstream
 SNP C/T C T C
rs219265081
MGI SNP Detail		 Chr1:127386085 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr30263 within coordinates of
Rr396245 669 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs240112726
MGI SNP Detail		 Chr1:127386123 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr30263 within coordinates of
Rr396245 631 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T G T T T T T T T G T T T T
rs253325388
MGI SNP Detail		 Chr1:127386145 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr30263 within coordinates of
Rr396245 609 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214408234
MGI SNP Detail		 Chr1:127386177 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr30263 within coordinates of
Rr396245 577 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs237229498
MGI SNP Detail		 Chr1:127386198 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr30263 within coordinates of
Rr396245 556 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs249911875
MGI SNP Detail		 Chr1:127386217 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr30263 within coordinates of
Rr396245 537 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219169981
MGI SNP Detail		 Chr1:127386241 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr30263 within coordinates of
Rr396245 513 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs235919095
MGI SNP Detail		 Chr1:127386264 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr30263 within coordinates of
Rr396245 490 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs37771329
MGI SNP Detail		 Chr1:127386309 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr30263 within coordinates of
Rr396245 445 bp upstream
 SNP A/G G G G G G A G G G A G A A
rs226288569
MGI SNP Detail		 Chr1:127386312 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr30263 within coordinates of
Rr396245 442 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G
rs247418621
MGI SNP Detail		 Chr1:127386414 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr30263 within coordinates of
Rr396245 340 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs263440008
MGI SNP Detail		 Chr1:127386426 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr30263 within coordinates of
Rr396245 328 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T
rs221854909
MGI SNP Detail		 Chr1:127386427 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr30263 within coordinates of
Rr396245 327 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs238235173
MGI SNP Detail		 Chr1:127386432 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr30263 within coordinates of
Rr396245 322 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs253771565
MGI SNP Detail		 Chr1:127386438 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr30263 within coordinates of
Rr396245 316 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs236059199
MGI SNP Detail		 Chr1:127386491 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr30263 within coordinates of
Rr396245 263 bp upstream
 SNP A/G G A
rs246671495
MGI SNP Detail		 Chr1:127386493 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr30263 within coordinates of
Rr396245 261 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G
rs37351015
MGI SNP Detail		 Chr1:127386508 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr30263 within coordinates of
Rr396245 246 bp upstream
 SNP A/G A A A A G A G A G G G G
rs231676896
MGI SNP Detail		 Chr1:127386570 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr30263 within coordinates of
Rr396245 184 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs3704955
MGI SNP Detail		 Chr1:127386595 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr30263 within coordinates of
Rr396245 159 bp upstream
 SNP A/T A A A A T T A T T
rs36756242
MGI SNP Detail		 Chr1:127386612 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr11973 within coordinates of
Rr30263 within coordinates of
Rr396245 142 bp upstream
 SNP A/G G G G G G A G G G A G G G
rs3705428
MGI SNP Detail		 Chr1:127386619 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr11973 within coordinates of
Rr30263 within coordinates of
Rr396245 135 bp upstream
 SNP A/G G G G A G
rs3705455
MGI SNP Detail		 Chr1:127386638 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr11973 within coordinates of
Rr30263 within coordinates of
Rr396245 116 bp upstream
 SNP C/T T T T C T
rs3705468
MGI SNP Detail		 Chr1:127386643 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr11973 within coordinates of
Rr30263 within coordinates of
Rr396245 111 bp upstream
 SNP A/G ? A A A A A A G G A A A G G G G
rs3705499
MGI SNP Detail		 Chr1:127386662 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr11973 within coordinates of
Rr30263 within coordinates of
Rr396245 92 bp upstream
 SNP C/T C C C C C T C T T C C C T T T
rs36925182
MGI SNP Detail		 Chr1:127386734 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr11973 within coordinates of
Rr30263 within coordinates of
Rr396245 20 bp upstream
 SNP A/G A A A A A G A A G G G G
rs3706102
MGI SNP Detail		 Chr1:127386790 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr11973 within coordinates of
Rr30263 within coordinates of
Rr396245 within coordinates of
 SNP A/T A A A A A A T T A A A T A
rs4138319
MGI SNP Detail		 Chr1:127386816 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr11973 within coordinates of
Rr30263 within coordinates of
Rr396245 within coordinates of
 SNP G/T T T T G T
rs38232540
MGI SNP Detail		 Chr1:127386822 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr11973 within coordinates of
Rr30263 within coordinates of
Rr396245 within coordinates of
 SNP A/C C C C A C A C C
rs4138343
MGI SNP Detail		 Chr1:127386824 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr11973 within coordinates of
Rr30263 within coordinates of
Rr396245 within coordinates of
 SNP A/G G G G A G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs36774592
MGI SNP Detail		 Chr1:127386850 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr11973 within coordinates of
Rr30263 within coordinates of
Rr396245 within coordinates of
 SNP A/C C C C C C A C C C A A A
rs222287562
MGI SNP Detail		 Chr1:127386887 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr11973 within coordinates of
Rr30263 within coordinates of
Rr396245 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs37170891
MGI SNP Detail		 Chr1:127386913 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr11973 within coordinates of
Rr30263 within coordinates of
Rr396245 within coordinates of
 SNP C/T T T T T C T C T T T C C C C
rs36925891
MGI SNP Detail		 Chr1:127386962 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr11973 within coordinates of
Rr30263 within coordinates of
Rr396245 within coordinates of
 SNP A/G A A A A A G A A A G G G G
rs218549044
MGI SNP Detail		 Chr1:127387092 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr11973 within coordinates of
Rr30263 within coordinates of
Rr396245 37 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240717670
MGI SNP Detail		 Chr1:127387139 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr11973 within coordinates of
Rr30263 within coordinates of
Rr396245 84 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs264392322
MGI SNP Detail		 Chr1:127387283 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr11973 within coordinates of
Rr30263 within coordinates of
Rr396245 228 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs584720575
MGI SNP Detail		 Chr1:127387331 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr11973 within coordinates of
Rr30263 within coordinates of
Rr396245 276 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs232116660
MGI SNP Detail		 Chr1:127387369 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr11973 within coordinates of
Rr30263 within coordinates of
Rr396245 314 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs32224333
MGI SNP Detail		 Chr1:127387447 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr30263 within coordinates of
Rr396245 392 bp downstream
 SNP C/T C T T T C T C C T T T C C C C C
rs265085416
MGI SNP Detail		 Chr1:127387449 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr30263 within coordinates of
Rr396245 394 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs226660067
MGI SNP Detail		 Chr1:127387485 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr30263 within coordinates of
Rr396245 430 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A
rs243677301
MGI SNP Detail		 Chr1:127387501 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr30263 within coordinates of
Rr396245 446 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs213095798
MGI SNP Detail		 Chr1:127387513 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr30263 within coordinates of
Rr396245 458 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs228722333
MGI SNP Detail		 Chr1:127387554 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr30263 within coordinates of
Rr396245 499 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs260482527
MGI SNP Detail		 Chr1:127387629 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr30263 within coordinates of
Rr396245 574 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs216142145
MGI SNP Detail		 Chr1:127387729 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr30263 within coordinates of
Rr396245 674 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs241538022
MGI SNP Detail		 Chr1:127387875 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr396245 820 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs257479123
MGI SNP Detail		 Chr1:127387931 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr396245 876 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs213341123
MGI SNP Detail		 Chr1:127387985 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr396245 930 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T
rs231886055
MGI SNP Detail		 Chr1:127388031 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr396245 976 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs247918364
MGI SNP Detail		 Chr1:127388051 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr396245 996 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs218470890
MGI SNP Detail		 Chr1:127388104 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr396245 1049 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T G T T T T T T T G T T T T
rs51812145
MGI SNP Detail		 Chr1:127388110 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr396245 1055 bp downstream
 SNP G G G
rs264158335
MGI SNP Detail		 Chr1:127388176 Gm41947 within coordinates of
Mgat5 within coordinates of
Rr396245 1121 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 100 of 120
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory
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