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Mouse SNP Summary
Symbol
Name
ID 		Rr396286
regulatory region 396286
MGI:7692398

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Showing SNP(s) 1 - 66 of 66

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs252181849
MGI SNP Detail		 Chr1:131453177 Cpgi711 within coordinates of
Rr396286 1843 bp upstream
Srgap2 within coordinates of
Tssr8628 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A G A A A A A A G A A A A A A G A A A A
rs216988110
MGI SNP Detail		 Chr1:131453273 Cpgi711 within coordinates of
Rr396286 1747 bp upstream
Srgap2 within coordinates of
Tssr13594 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231286561
MGI SNP Detail		 Chr1:131453644 Cpgi711 within coordinates of
Rr396286 1376 bp upstream
Srgap2 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244383361
MGI SNP Detail		 Chr1:131453927 Cpgi711 within coordinates of
Rr396286 1093 bp upstream
Srgap2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs211804280
MGI SNP Detail		 Chr1:131454009 Cpgi711 within coordinates of
Rr396286 1011 bp upstream
Srgap2 within coordinates of
 SNP A/C/G A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A C A A A A A A C A A A A A A A G A A A A
rs230464477
MGI SNP Detail		 Chr1:131454139 Cpgi711 within coordinates of
Rr396286 881 bp upstream
Srgap2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263621198
MGI SNP Detail		 Chr1:131454223 Cpgi711 within coordinates of
Rr396286 797 bp upstream
Srgap2 within coordinates of
Tssr13598 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G
rs36711163
MGI SNP Detail		 Chr1:131454234 Cpgi711 within coordinates of
Rr396286 786 bp upstream
Srgap2 within coordinates of
Tssr13598 within coordinates of
 SNP A/G G G G G G G G G G G A G G G G
rs227193924
MGI SNP Detail		 Chr1:131454256 Cpgi711 within coordinates of
Rr396286 764 bp upstream
Srgap2 within coordinates of
Tssr13598 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs240409832
MGI SNP Detail		 Chr1:131454270 Cpgi711 within coordinates of
Rr396286 750 bp upstream
Srgap2 within coordinates of
Tssr13598 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs50965146
MGI SNP Detail		 Chr1:131454291 Cpgi711 within coordinates of
Rr396286 729 bp upstream
Srgap2 within coordinates of
 SNP G G G
rs259808708
MGI SNP Detail		 Chr1:131454328 Cpgi711 within coordinates of
Rr396286 692 bp upstream
Srgap2 within coordinates of
Tssr13599 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs37537139
MGI SNP Detail		 Chr1:131454464 Cpgi711 within coordinates of
Gm70877 within coordinates of
Rr396286 556 bp upstream
Srgap2 within coordinates of
Tssr13600 within coordinates of
 SNP G/T G G G G G G G G G G G G G T G
rs239951702
MGI SNP Detail		 Chr1:131454470 Cpgi711 within coordinates of
Gm70877 within coordinates of
Rr396286 550 bp upstream
Srgap2 within coordinates of
Tssr13600 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs36627034
MGI SNP Detail		 Chr1:131454498 Cpgi711 within coordinates of
Gm70877 within coordinates of
Rr396286 522 bp upstream
Srgap2 within coordinates of
 SNP A/G A A A A A A A A A A G A A G A
rs219020654
MGI SNP Detail		 Chr1:131454561 Cpgi711 within coordinates of
Gm70877 within coordinates of
Rr396286 459 bp upstream
Srgap2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs247569044
MGI SNP Detail		 Chr1:131454706 Cpgi711 within coordinates of
Gm70877 within coordinates of
Rr396286 314 bp upstream
Srgap2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs36874446
MGI SNP Detail		 Chr1:131454741 Cpgi711 within coordinates of
Gm70877 within coordinates of
Rr396286 279 bp upstream
Srgap2 within coordinates of
 SNP G/T G G G G G G G G T G G T G
rs233872305
MGI SNP Detail		 Chr1:131454769 Cpgi711 within coordinates of
Gm70877 within coordinates of
Rr396286 251 bp upstream
Srgap2 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs37450928
MGI SNP Detail		 Chr1:131454845 Cpgi711 within coordinates of
Gm70877 within coordinates of
Rr396286 175 bp upstream
Srgap2 within coordinates of
 SNP A/G G G G G G G G G G G A G G G G
rs247803412
MGI SNP Detail		 Chr1:131454872 Cpgi711 within coordinates of
Gm70877 within coordinates of
Rr396286 148 bp upstream
Srgap2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258036657
MGI SNP Detail		 Chr1:131454896 Cpgi711 within coordinates of
Gm70877 within coordinates of
Rr396286 124 bp upstream
Srgap2 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G T G G G G G G T G G G G G G G G G G
rs225162192
MGI SNP Detail		 Chr1:131454905 Cpgi711 within coordinates of
Gm70877 within coordinates of
Rr396286 115 bp upstream
Srgap2 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244416565
MGI SNP Detail		 Chr1:131455064 Cpgi711 within coordinates of
Gm70877 within coordinates of
Rr396286 within coordinates of
Srgap2 within coordinates of
Tssr13602 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A G A A A A A A A A A A A A A A A A A A
rs211882476
MGI SNP Detail		 Chr1:131455079 Cpgi711 within coordinates of
Gm70877 within coordinates of
Rr396286 within coordinates of
Srgap2 within coordinates of
Tssr13602 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs224073084
MGI SNP Detail		 Chr1:131455213 Cpgi711 within coordinates of
Gm70877 within coordinates of
Rr396286 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253650640
MGI SNP Detail		 Chr1:131455240 Cpgi711 within coordinates of
Gm70877 within coordinates of
Rr396286 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214656092
MGI SNP Detail		 Chr1:131455280 Cpgi711 within coordinates of
Gm70877 within coordinates of
Rr396286 within coordinates of
 SNP C/T T C
rs31427420
MGI SNP Detail		 Chr1:131455287 Cpgi711 within coordinates of
Gm70877 within coordinates of
Rr396286 within coordinates of
 SNP A/T A A T T A A T
rs263572560
MGI SNP Detail		 Chr1:131455302 Cpgi711 within coordinates of
Gm70877 within coordinates of
Rr396286 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs36823232
MGI SNP Detail		 Chr1:131455304 Cpgi711 within coordinates of
Gm70877 within coordinates of
Rr396286 within coordinates of
 SNP A/G G G G G G G A G G G A G G A G
rs39351688
MGI SNP Detail		 Chr1:131455353 Cpgi711 within coordinates of
Gm70877 within coordinates of
Rr396286 32 bp downstream
Rr396287 within coordinates of
 SNP A/G G G G G G G G G G G G G G A G
rs249884785
MGI SNP Detail		 Chr1:131455408 Cpgi711 within coordinates of
Gm70877 within coordinates of
Rr396286 87 bp downstream
Rr396287 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs249923272
MGI SNP Detail		 Chr1:131455522 Cpgi711 within coordinates of
Rr396286 201 bp downstream
Rr396287 within coordinates of
 SNP A/G A G
rs37686172
MGI SNP Detail		 Chr1:131455582 Cpgi711 within coordinates of
Rr396286 261 bp downstream
Rr396287 within coordinates of
 SNP A/G G G A G A G G G G G G G G G
rs39271160
MGI SNP Detail		 Chr1:131455758 Cpgi711 within coordinates of
Fam72a within coordinates of
Rr396286 437 bp downstream
 SNP C/G C C C C C C G C C C C C C C C
rs224311422
MGI SNP Detail		 Chr1:131455765 Cpgi711 within coordinates of
Fam72a within coordinates of
Rr396286 444 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs246463736
MGI SNP Detail		 Chr1:131455835 Cpgi711 within coordinates of
Fam72a within coordinates of
Rr396286 514 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs36301857
MGI SNP Detail		 Chr1:131455857 Cpgi711 within coordinates of
Fam72a within coordinates of
Rr396286 536 bp downstream
 SNP C/T C C C C C C C C C C T C C T C
rs36419794
MGI SNP Detail		 Chr1:131455865 Cpgi711 within coordinates of
Fam72a within coordinates of
Rr396286 544 bp downstream
 SNP C/G C C C C C C G C C C C G C
rs238292190
MGI SNP Detail		 Chr1:131455895 Cpgi711 within coordinates of
Fam72a within coordinates of
Rr396286 574 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253767933
MGI SNP Detail		 Chr1:131455908 Cpgi711 within coordinates of
Fam72a within coordinates of
Rr396286 587 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs228556887
MGI SNP Detail		 Chr1:131455923 Cpgi711 within coordinates of
Fam72a within coordinates of
Rr396286 602 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258973339
MGI SNP Detail		 Chr1:131455960 Cpgi711 within coordinates of
Fam72a within coordinates of
Rr396286 639 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218811821
MGI SNP Detail		 Chr1:131455972 Cpgi711 within coordinates of
Fam72a within coordinates of
Rr396286 651 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G
rs36998619
MGI SNP Detail		 Chr1:131456020 Cpgi711 within coordinates of
Fam72a within coordinates of
Rr396286 699 bp downstream
 SNP A/G A A A A A G A A A G A A G
rs36265978
MGI SNP Detail		 Chr1:131456084 Cpgi711 within coordinates of
Fam72a within coordinates of
Rr396286 763 bp downstream
 SNP A/G G G G G G G G G G G A G G A G
rs36507220
MGI SNP Detail		 Chr1:131456121 Cpgi711 within coordinates of
Fam72a within coordinates of
Rr396286 800 bp downstream
 SNP C/T C C C C C C C C C C T C C C C
rs36322126
MGI SNP Detail		 Chr1:131456128 Cpgi711 within coordinates of
Fam72a within coordinates of
Rr396286 807 bp downstream
 SNP C/T C C C C C C C C C C C C C T C
rs38677163
MGI SNP Detail		 Chr1:131456189 Cpgi711 within coordinates of
Fam72a within coordinates of
Rr396286 868 bp downstream
 SNP A/G A A A A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs233315445
MGI SNP Detail		 Chr1:131456222 Cpgi711 within coordinates of
Fam72a within coordinates of
Rr396286 901 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs38389619
MGI SNP Detail		 Chr1:131456291 Cpgi711 within coordinates of
Fam72a within coordinates of
Rr396286 970 bp downstream
 SNP A/T T T T T T T T T T T A T T A T
rs213182504
MGI SNP Detail		 Chr1:131456608 Fam72a within coordinates of
Rr396286 1287 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239741240
MGI SNP Detail		 Chr1:131456755 Fam72a within coordinates of
Rr396286 1434 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264322189
MGI SNP Detail		 Chr1:131456841 Fam72a within coordinates of
Rr396286 1520 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs37358824
MGI SNP Detail		 Chr1:131456858 Fam72a within coordinates of
Rr396286 1537 bp downstream
 SNP A/C C C C C C C C C C C A C C A C
rs249260413
MGI SNP Detail		 Chr1:131456992 Fam72a within coordinates of
Rr396286 1671 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249751285
MGI SNP Detail		 Chr1:131457056 Fam72a within coordinates of
Rr396286 1735 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs37722372
MGI SNP Detail		 Chr1:131457100 Fam72a within coordinates of
Rr396286 1779 bp downstream
 SNP A/G G G G G G G G G G G A G G G G
rs219375988
MGI SNP Detail		 Chr1:131457118 Fam72a within coordinates of
Rr396286 1797 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs37195913
MGI SNP Detail		 Chr1:131457120 Fam72a within coordinates of
Rr396286 1799 bp downstream
 SNP A/T A A A A A A T A A A T A A T A
rs253843438
MGI SNP Detail		 Chr1:131457128 Fam72a within coordinates of
Rr396286 1807 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs220924986
MGI SNP Detail		 Chr1:131457177 Fam72a within coordinates of
Rr396286 1856 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs247223414
MGI SNP Detail		 Chr1:131457254 Fam72a within coordinates of
Rr396286 1933 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs266090213
MGI SNP Detail		 Chr1:131457284 Fam72a within coordinates of
Rr396286 1963 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs231440899
MGI SNP Detail		 Chr1:131457300 Fam72a within coordinates of
Rr396286 1979 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
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Showing SNP(s) 1 - 66 of 66
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory