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Mouse SNP Summary
Symbol
Name
ID 		Rr396882
regulatory region 396882
MGI:7692994

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Showing SNP(s) 1 - 71 of 71

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs258967458
MGI SNP Detail		 Chr2:31558689 Rr396882 1851 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A C A A A A A A C A A A A A A A C A A A A
rs582995215
MGI SNP Detail		 Chr2:31558774 Rr396882 1766 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs586458189
MGI SNP Detail		 Chr2:31558825 Rr396882 1715 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs579181807
MGI SNP Detail		 Chr2:31558879 Rr396882 1661 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs582004254
MGI SNP Detail		 Chr2:31558885 Rr396882 1655 bp upstream
 SNP A A A A A A A A A A A A A A A A A A A A A A
rs585070997
MGI SNP Detail		 Chr2:31558887 Rr396882 1653 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G
rs215664740
MGI SNP Detail		 Chr2:31559047 Rr396882 1493 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G G G G G G T G G G G G G G G G G G G
rs579913854
MGI SNP Detail		 Chr2:31559060 Rr396882 1480 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs583144166
MGI SNP Detail		 Chr2:31559081 Rr396882 1459 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs586149342
MGI SNP Detail		 Chr2:31559088 Rr396882 1452 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs227251094
MGI SNP Detail		 Chr2:31559089 Rr396882 1451 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A G
rs580205643
MGI SNP Detail		 Chr2:31559101 Rr396882 1439 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs583617931
MGI SNP Detail		 Chr2:31559116 Rr396882 1424 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs245600263
MGI SNP Detail		 Chr2:31559164 Rr396882 1376 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C T C C C C C C T C C C C C C C C C C C C
rs213661226
MGI SNP Detail		 Chr2:31559190 Rr396882 1350 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs237236423
MGI SNP Detail		 Chr2:31559215 Rr396882 1325 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs249085543
MGI SNP Detail		 Chr2:31559268 Rr396882 1272 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs212341271
MGI SNP Detail		 Chr2:31559296 Rr396882 1244 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240352163
MGI SNP Detail		 Chr2:31559386 Rr396882 1154 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs252765998
MGI SNP Detail		 Chr2:31559466 Rr396882 1074 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221540111
MGI SNP Detail		 Chr2:31559558 Rr396882 982 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs233133193
MGI SNP Detail		 Chr2:31559572 Rr396882 968 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27177085
MGI SNP Detail		 Chr2:31559721 Rr396882 819 bp upstream
 SNP C/T T T T T T T T T T T T C T
rs222973555
MGI SNP Detail		 Chr2:31559821 Rr396882 719 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs245474073
MGI SNP Detail		 Chr2:31559831 Rr396882 709 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs261710058
MGI SNP Detail		 Chr2:31559950 Rr396882 590 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C C
rs226790714
MGI SNP Detail		 Chr2:31559959 Rr396882 581 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs241680125
MGI SNP Detail		 Chr2:31559964 Rr396882 576 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs259723923
MGI SNP Detail		 Chr2:31560041 Rr396882 499 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs227122656
MGI SNP Detail		 Chr2:31560160 Rr396882 380 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs245660323
MGI SNP Detail		 Chr2:31560207 Rr396882 333 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs580454068
MGI SNP Detail		 Chr2:31560247 Rr396882 293 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs583236882
MGI SNP Detail		 Chr2:31560262 Rr396882 278 bp upstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs586214485
MGI SNP Detail		 Chr2:31560351 Rr396882 189 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs257424503
MGI SNP Detail		 Chr2:31560367 Rr396882 173 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A A A A A T A A A A A A A A A A A A
rs228534894
MGI SNP Detail		 Chr2:31560383 Rr396882 157 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs252554460
MGI SNP Detail		 Chr2:31560388 Rr396882 152 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs219122841
MGI SNP Detail		 Chr2:31560446 Rr396882 94 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs27177084
MGI SNP Detail		 Chr2:31560551 Rr396882 within coordinates of
 SNP G/T T T T T T T T T T G T T G T
rs27177083
MGI SNP Detail		 Chr2:31560575 Rr396882 within coordinates of
 SNP C/T C C C C T C C C C C C C C C C
rs47104453
MGI SNP Detail		 Chr2:31560720 Cpgi11482 within coordinates of
Rr396882 within coordinates of
 SNP A/G G A
rs246757072
MGI SNP Detail		 Chr2:31560838 Cpgi11482 within coordinates of
Exosc2 within coordinates of
Rr396882 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216132467
MGI SNP Detail		 Chr2:31560865 Cpgi11482 within coordinates of
Exosc2 within coordinates of
Rr396882 24 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233010020
MGI SNP Detail		 Chr2:31560891 Cpgi11482 within coordinates of
Exosc2 within coordinates of
Rr396882 50 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs27177082
MGI SNP Detail		 Chr2:31561073 Cpgi11482 within coordinates of
Exosc2 within coordinates of
Rr396882 232 bp downstream
 SNP C/T T T T T T T T T T T C T T C T
rs222500176
MGI SNP Detail		 Chr2:31561133 Exosc2 within coordinates of
Rr396882 292 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs235639759
MGI SNP Detail		 Chr2:31561382 Exosc2 within coordinates of
Rr396882 541 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs261219608
MGI SNP Detail		 Chr2:31561383 Exosc2 within coordinates of
Rr396882 542 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227133127
MGI SNP Detail		 Chr2:31561389 Exosc2 within coordinates of
Rr396882 548 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs241743364
MGI SNP Detail		 Chr2:31561426 Exosc2 within coordinates of
Rr396882 585 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs259589442
MGI SNP Detail		 Chr2:31561470 Exosc2 within coordinates of
Rr396882 629 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs581131481
MGI SNP Detail		 Chr2:31561604 Exosc2 within coordinates of
Rr396882 763 bp downstream
 SNP A/C C C C C C C C C C C C C A C C C C C C C C A C C C C C C
rs229105105
MGI SNP Detail		 Chr2:31561605 Exosc2 within coordinates of
Rr396882 764 bp downstream
 SNP A/C A A A A A A A C A A A A A A A A C A A A A A A
rs249025953
MGI SNP Detail		 Chr2:31561675 Exosc2 within coordinates of
Rr396882 834 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs584320800
MGI SNP Detail		 Chr2:31561702 Exosc2 within coordinates of
Rr396882 861 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs266142171
MGI SNP Detail		 Chr2:31561995 Exosc2 within coordinates of
Rr396882 1154 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C T C C C C C C C T C C C C
rs228372706
MGI SNP Detail		 Chr2:31562051 Exosc2 within coordinates of
Rr396882 1210 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs246811772
MGI SNP Detail		 Chr2:31562055 Exosc2 within coordinates of
Rr396882 1214 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs27177081
MGI SNP Detail		 Chr2:31562098 Exosc2 within coordinates of
Rr396882 1257 bp downstream
 SNP C/G G G G G G G G G G G C G G C G
rs586803957
MGI SNP Detail		 Chr2:31562122 Exosc2 within coordinates of
Rr396882 1281 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs226874591
MGI SNP Detail		 Chr2:31562175 Exosc2 within coordinates of
Rr396882 1334 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs244728137
MGI SNP Detail		 Chr2:31562178 Exosc2 within coordinates of
Rr396882 1337 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs27177080
MGI SNP Detail		 Chr2:31562347 Exosc2 within coordinates of
Rr396882 1506 bp downstream
 SNP A/G G G G G G G G G G A G G A G
rs27177079
MGI SNP Detail		 Chr2:31562350 Exosc2 within coordinates of
Rr396882 1509 bp downstream
 SNP A/G G G G G G G A G G G G G G
rs581381710
MGI SNP Detail		 Chr2:31562378 Exosc2 within coordinates of
Rr396882 1537 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs255748268
MGI SNP Detail		 Chr2:31562388 Exosc2 within coordinates of
Rr396882 1547 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs219630983
MGI SNP Detail		 Chr2:31562391 Exosc2 within coordinates of
Rr396882 1550 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs235945975
MGI SNP Detail		 Chr2:31562632 Exosc2 within coordinates of
Rr396882 1791 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs253907889
MGI SNP Detail		 Chr2:31562651 Exosc2 within coordinates of
Rr396882 1810 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27177078
MGI SNP Detail		 Chr2:31562661 Exosc2 within coordinates of
Rr396882 1820 bp downstream
 SNP G/T G G G G G G G G G G T G G T G
rs584841246
MGI SNP Detail		 Chr2:31562712 Exosc2 within coordinates of
Rr396882 1871 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
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Showing SNP(s) 1 - 71 of 71
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory