About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID 		Rr396887
regulatory region 396887
MGI:7692999

<< first < prev1 next > last >>
Showing SNP(s) 1 - 61 of 61

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs226282560
MGI SNP Detail		 Chr2:32340013 Rr396887 1943 bp upstream
Slc25a25 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs238519361
MGI SNP Detail		 Chr2:32340077 Rr396887 1879 bp upstream
Slc25a25 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264858547
MGI SNP Detail		 Chr2:32340175 Rr396887 1781 bp upstream
Slc25a25 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs227583023
MGI SNP Detail		 Chr2:32340210 Rr396887 1746 bp upstream
Slc25a25 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260032447
MGI SNP Detail		 Chr2:32340364 Rr396887 1592 bp upstream
Slc25a25 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217770670
MGI SNP Detail		 Chr2:32340377 Rr396887 1579 bp upstream
Slc25a25 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs227442385
MGI SNP Detail		 Chr2:32340444 Rr396887 1512 bp upstream
Slc25a25 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs215339228
MGI SNP Detail		 Chr2:32340744 Cpgi11510 within coordinates of
Naif1 within coordinates of
Rr396887 1212 bp upstream
Slc25a25 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs232229352
MGI SNP Detail		 Chr2:32340800 Cpgi11510 within coordinates of
Naif1 within coordinates of
Rr396887 1156 bp upstream
Slc25a25 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T C T T T C T T T C T T C T T T T T T C T C T C
rs257119713
MGI SNP Detail		 Chr2:32340834 Cpgi11510 within coordinates of
Naif1 within coordinates of
Rr396887 1122 bp upstream
Slc25a25 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs213708624
MGI SNP Detail		 Chr2:32340967 Cpgi11510 within coordinates of
Naif1 within coordinates of
Rr396887 989 bp upstream
Slc25a25 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs235002972
MGI SNP Detail		 Chr2:32341196 Cpgi11510 within coordinates of
Naif1 within coordinates of
Rr396887 760 bp upstream
Slc25a25 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T C T T T T
rs225852160
MGI SNP Detail		 Chr2:32341279 Cpgi11510 within coordinates of
Naif1 within coordinates of
Rr396887 677 bp upstream
Slc25a25 within coordinates of
 SNP G/T T G
rs264422008
MGI SNP Detail		 Chr2:32341450 Cpgi11510 within coordinates of
Naif1 within coordinates of
Rr396886 within coordinates of
Rr396887 506 bp upstream
Slc25a25 within coordinates of
Tssr23523 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C C C C C C C G C C C C C C C C C C C C
rs223014334
MGI SNP Detail		 Chr2:32341527 Cpgi11510 within coordinates of
Naif1 within coordinates of
Rr396886 within coordinates of
Rr396887 429 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G A G G G G G G G G G G G G
rs241485367
MGI SNP Detail		 Chr2:32341699 Cpgi11510 within coordinates of
Naif1 within coordinates of
Rr396887 257 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252615914
MGI SNP Detail		 Chr2:32341708 Cpgi11510 within coordinates of
Naif1 within coordinates of
Rr396887 248 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A G A A A A A A G A A A A A A A A A A A A
rs220029208
MGI SNP Detail		 Chr2:32341730 Cpgi11510 within coordinates of
Naif1 within coordinates of
Rr396887 226 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A C A A A A A A C A A A A A A A C A A A A
rs245607327
MGI SNP Detail		 Chr2:32341747 Cpgi11510 within coordinates of
Naif1 within coordinates of
Rr396887 209 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A C A A A A A A C A A A A A A A C A A A A
rs261758748
MGI SNP Detail		 Chr2:32341749 Cpgi11510 within coordinates of
Naif1 within coordinates of
Rr396887 207 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A C A A A A A A C A A A A A A A C A A A A
rs220096663
MGI SNP Detail		 Chr2:32341832 Cpgi11510 within coordinates of
Naif1 within coordinates of
Rr396887 124 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G T G G G G G G T G G G G G G G G G G G G
rs248354075
MGI SNP Detail		 Chr2:32341891 Cpgi11510 within coordinates of
Naif1 within coordinates of
Rr396887 65 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T C T T T T T T C T T T T T T T C T T T T
rs265917623
MGI SNP Detail		 Chr2:32342006 Cpgi11510 within coordinates of
Naif1 within coordinates of
Rr396887 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A G A A A A A A G A A A A A A A A A A A A
rs227477705
MGI SNP Detail		 Chr2:32342019 Cpgi11510 within coordinates of
Naif1 within coordinates of
Rr396887 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs245142884
MGI SNP Detail		 Chr2:32342086 Cpgi11510 within coordinates of
Naif1 within coordinates of
Rr396887 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs257440663
MGI SNP Detail		 Chr2:32342101 Cpgi11510 within coordinates of
Naif1 within coordinates of
Rr396887 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G
rs226228108
MGI SNP Detail		 Chr2:32342147 Cpgi11510 within coordinates of
Naif1 within coordinates of
Rr396887 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255349882
MGI SNP Detail		 Chr2:32342254 Cpgi11510 within coordinates of
Naif1 within coordinates of
Rr396887 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212945595
MGI SNP Detail		 Chr2:32342275 Cpgi11510 within coordinates of
Naif1 within coordinates of
Rr396887 18 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236340091
MGI SNP Detail		 Chr2:32342371 Cpgi11510 within coordinates of
Naif1 within coordinates of
Rr396887 114 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G A G G G A G G G A G G A G G G G G G G G G G G
rs255104439
MGI SNP Detail		 Chr2:32342567 Cpgi11510 within coordinates of
Naif1 within coordinates of
Rr396887 310 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C
rs217000844
MGI SNP Detail		 Chr2:32342753 Naif1 within coordinates of
Rr396887 496 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs235086509
MGI SNP Detail		 Chr2:32342903 Naif1 within coordinates of
Rr396887 646 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T
rs253097531
MGI SNP Detail		 Chr2:32343127 Naif1 within coordinates of
Rr396887 870 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs220066311
MGI SNP Detail		 Chr2:32343373 Naif1 within coordinates of
Rr396887 1116 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A
rs235927153
MGI SNP Detail		 Chr2:32343424 Naif1 within coordinates of
Rr396887 1167 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G T G G G G
rs261360433
MGI SNP Detail		 Chr2:32343428 Naif1 within coordinates of
Rr396887 1171 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs220036368
MGI SNP Detail		 Chr2:32343478 Naif1 within coordinates of
Rr396887 1221 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs581822231
MGI SNP Detail		 Chr2:32343525 Naif1 within coordinates of
Rr396887 1268 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs586252148
MGI SNP Detail		 Chr2:32343538 Naif1 within coordinates of
Rr396887 1281 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T A T T T T T T A T T T T T T T T T T T T
rs250742142
MGI SNP Detail		 Chr2:32343591 Naif1 within coordinates of
Rr396887 1334 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs259019958
MGI SNP Detail		 Chr2:32343592 Naif1 within coordinates of
Rr396887 1335 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs221396241
MGI SNP Detail		 Chr2:32343596 Naif1 within coordinates of
Rr396887 1339 bp downstream
 SNP A/G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs239125529
MGI SNP Detail		 Chr2:32343597 Naif1 within coordinates of
Rr396887 1340 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256113278
MGI SNP Detail		 Chr2:32343697 Naif1 within coordinates of
Rr396887 1440 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230047125
MGI SNP Detail		 Chr2:32343714 Naif1 within coordinates of
Rr396887 1457 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs250924078
MGI SNP Detail		 Chr2:32343743 Naif1 within coordinates of
Rr396887 1486 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs264901081
MGI SNP Detail		 Chr2:32343849 Naif1 within coordinates of
Rr396887 1592 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs227785352
MGI SNP Detail		 Chr2:32343851 Naif1 within coordinates of
Rr396887 1594 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C C
rs260246476
MGI SNP Detail		 Chr2:32343950 Naif1 within coordinates of
Rr373005 within coordinates of
Rr396887 1693 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs217030623
MGI SNP Detail		 Chr2:32343951 Naif1 within coordinates of
Rr373005 within coordinates of
Rr396887 1694 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A G A A A G A A A G A A G A A A A A A A G A G A
rs235122992
MGI SNP Detail		 Chr2:32343965 Naif1 within coordinates of
Rr373005 within coordinates of
Rr396887 1708 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs246783435
MGI SNP Detail		 Chr2:32343966 Naif1 within coordinates of
Rr373005 within coordinates of
Rr396887 1709 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214704171
MGI SNP Detail		 Chr2:32343968 Naif1 within coordinates of
Rr373005 within coordinates of
Rr396887 1711 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs238434039
MGI SNP Detail		 Chr2:32343972 Naif1 within coordinates of
Rr373005 within coordinates of
Rr396887 1715 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs239998704
MGI SNP Detail		 Chr2:32344081 Naif1 within coordinates of
Rr373005 within coordinates of
Rr396887 1824 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252347951
MGI SNP Detail		 Chr2:32344096 Naif1 within coordinates of
Rr373005 within coordinates of
Rr396887 1839 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs221419940
MGI SNP Detail		 Chr2:32344114 Naif1 within coordinates of
Rr373005 within coordinates of
Rr396887 1857 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs239244743
MGI SNP Detail		 Chr2:32344140 Naif1 within coordinates of
Rr373005 within coordinates of
Rr396887 1883 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250458789
MGI SNP Detail		 Chr2:32344182 Naif1 within coordinates of
Rr373005 within coordinates of
Rr396887 1925 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs222477300
MGI SNP Detail		 Chr2:32344250 Naif1 within coordinates of
Rr373005 within coordinates of
Rr396887 1993 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
<< first < prev1 next > last >>
Showing SNP(s) 1 - 61 of 61
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory
Building initial tooltip...