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Mouse SNP Summary
Symbol
Name
ID
Rr397404
regulatory region 397404
MGI:7693516

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Showing SNP(s) 1 - 66 of 66

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs253397740
MGI SNP Detail
Chr2:153001158 Gm75427 within coordinates of
Rr397404 1902 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs222325655
MGI SNP Detail
Chr2:153001167 Gm75427 within coordinates of
Rr397404 1893 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs242616855
MGI SNP Detail
Chr2:153001180 Gm75427 within coordinates of
Rr397404 1880 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264505779
MGI SNP Detail
Chr2:153001229 Gm75427 within coordinates of
Rr397404 1831 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs223036912
MGI SNP Detail
Chr2:153001262 Gm75427 within coordinates of
Rr397404 1798 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs245554172
MGI SNP Detail
Chr2:153001263 Gm75427 within coordinates of
Rr397404 1797 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33400813
MGI SNP Detail
Chr2:153001275 Gm75427 within coordinates of
Rr397404 1785 bp upstream
SNP A/G A G A G
rs227094231
MGI SNP Detail
Chr2:153001315 Gm75427 within coordinates of
Rr397404 1745 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs248715679
MGI SNP Detail
Chr2:153001399 Gm75427 within coordinates of
Rr397404 1661 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27352748
MGI SNP Detail
Chr2:153001434 Gm75427 within coordinates of
Rr397404 1626 bp upstream
SNP C/T T T T T T T C T T T T T T C T
rs32926126
MGI SNP Detail
Chr2:153001466 Gm75427 within coordinates of
Rr397404 1594 bp upstream
SNP C/T C C T C T
rs27352747
MGI SNP Detail
Chr2:153001467 Gm75427 within coordinates of
Rr397404 1593 bp upstream
SNP A/G A A G A A G A A G G A A G A G A
rs215071968
MGI SNP Detail
Chr2:153001524 Gm75427 within coordinates of
Rr397404 1536 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230990024
MGI SNP Detail
Chr2:153001540 Gm75427 within coordinates of
Rr397404 1520 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs243859406
MGI SNP Detail
Chr2:153001580 Gm75427 within coordinates of
Rr397404 1480 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs216100876
MGI SNP Detail
Chr2:153001605 Gm75427 within coordinates of
Rr397404 1455 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs233004668
MGI SNP Detail
Chr2:153001849 Gm75427 within coordinates of
Rr397404 1211 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs253475378
MGI SNP Detail
Chr2:153001970 Gm75427 within coordinates of
Rr397404 1090 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27352746
MGI SNP Detail
Chr2:153001997 Gm75427 within coordinates of
Rr397404 1063 bp upstream
SNP C/T T T T T T T C T T T T T T T T
rs27352745
MGI SNP Detail
Chr2:153002004 Gm75427 within coordinates of
Rr397404 1056 bp upstream
SNP C/T C C C C C C C C C C C C C T C
rs27352744
MGI SNP Detail
Chr2:153002005 Gm75427 within coordinates of
Rr397404 1055 bp upstream
SNP A/G G G A G G A G G G A G G A G G G
rs29516731
MGI SNP Detail
Chr2:153002161 Gm75427 within coordinates of
Rr397404 899 bp upstream
SNP A/C A C A C
rs242757050
MGI SNP Detail
Chr2:153002182 Gm75427 within coordinates of
Rr397404 878 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs253297089
MGI SNP Detail
Chr2:153002204 Gm75427 within coordinates of
Rr397404 856 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C
rs220857602
MGI SNP Detail
Chr2:153002266 Gm75427 within coordinates of
Rr397404 794 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs242532602
MGI SNP Detail
Chr2:153002342 Gm75427 within coordinates of
Rr397404 718 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs260563366
MGI SNP Detail
Chr2:153002367 Gm75427 within coordinates of
Rr397404 693 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27352743
MGI SNP Detail
Chr2:153002380 Gm75427 within coordinates of
Rr397404 680 bp upstream
SNP A/C A A A A A A C A A A A A A C A
rs27352742
MGI SNP Detail
Chr2:153002472 Gm75427 within coordinates of
Rr397404 588 bp upstream
SNP A/T T T T T T T A T T T T T T A T
rs33254380
MGI SNP Detail
Chr2:153002519 Gm75427 within coordinates of
Rr397404 541 bp upstream
SNP C/T C T C T
rs230133167
MGI SNP Detail
Chr2:153002616 Gm75427 within coordinates of
Rr397404 444 bp upstream
Rr55859 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs243941635
MGI SNP Detail
Chr2:153003037 Gm75427 within coordinates of
Gm75432 within coordinates of
Rr397404 23 bp upstream
Rr55859 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27352741
MGI SNP Detail
Chr2:153003227 Gm75427 within coordinates of
Gm75432 within coordinates of
Rr397404 within coordinates of
Rr55859 within coordinates of
Tm9sf4 within coordinates of
Tssr20873 within coordinates of
SNP A/G G G G G G G G G G G G G G A G
rs27352740
MGI SNP Detail
Chr2:153003275 Gm75427 within coordinates of
Gm75432 within coordinates of
Rr397404 within coordinates of
Rr55859 within coordinates of
Tm9sf4 within coordinates of
SNP A/G G G G G G G A G G G G G G G G
rs247603665
MGI SNP Detail
Chr2:153003872 Cpgi12480 within coordinates of
Gm75427 within coordinates of
Rr397404 511 bp downstream
Rr55859 within coordinates of
Tm9sf4 within coordinates of
Tssr20876 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27352739
MGI SNP Detail
Chr2:153003902 Cpgi12480 within coordinates of
Gm75427 within coordinates of
Rr397404 541 bp downstream
Rr55859 within coordinates of
Tm9sf4 within coordinates of
SNP A/G G G A G G A G G A G G A A G A G
rs27352738
MGI SNP Detail
Chr2:153003928 Cpgi12480 within coordinates of
Gm75427 within coordinates of
Rr397404 567 bp downstream
Rr55859 within coordinates of
Tm9sf4 within coordinates of
SNP C/T C C C C C C T C C C C C C C C
rs261080625
MGI SNP Detail
Chr2:153003963 Cpgi12480 within coordinates of
Gm75427 within coordinates of
Rr397404 602 bp downstream
Rr55859 within coordinates of
Tm9sf4 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215227828
MGI SNP Detail
Chr2:153004022 Gm75427 within coordinates of
Rr397404 661 bp downstream
Rr55859 within coordinates of
Tm9sf4 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs27352737
MGI SNP Detail
Chr2:153004063 Rr397404 702 bp downstream
Rr55859 within coordinates of
Tm9sf4 within coordinates of
SNP C/T C T C C T C C T C C T C T C
rs47313463
MGI SNP Detail
Chr2:153004158 Rr397404 797 bp downstream
Rr55859 within coordinates of
Tm9sf4 within coordinates of
SNP A/C A C
rs253333469
MGI SNP Detail
Chr2:153004188 Rr397404 827 bp downstream
Rr55859 within coordinates of
Tm9sf4 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs220706724
MGI SNP Detail
Chr2:153004225 Rr397404 864 bp downstream
Rr55859 within coordinates of
Tm9sf4 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs45724583
MGI SNP Detail
Chr2:153004299 Rr397404 938 bp downstream
Rr55859 within coordinates of
Tm9sf4 within coordinates of
SNP C/T C T T
rs45928114
MGI SNP Detail
Chr2:153004300 Rr397404 939 bp downstream
Rr55859 within coordinates of
Tm9sf4 within coordinates of
SNP G/T T G G
rs27352736
MGI SNP Detail
Chr2:153004321 Rr397404 960 bp downstream
Rr55859 within coordinates of
Tm9sf4 within coordinates of
SNP A/G A A G A A G A A G A A G G A G A
rs27352735
MGI SNP Detail
Chr2:153004427 Rr397404 1066 bp downstream
Rr55859 within coordinates of
Tm9sf4 within coordinates of
SNP C/T T T C T T C T T C T T C C T C T
rs27352734
MGI SNP Detail
Chr2:153004477 Rr397404 1116 bp downstream
Rr55859 within coordinates of
Tm9sf4 within coordinates of
SNP C/G C C G C C G C G G C C G G C G C
rs229974958
MGI SNP Detail
Chr2:153004515 Rr397404 1154 bp downstream
Rr55859 within coordinates of
Tm9sf4 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27352733
MGI SNP Detail
Chr2:153004544 Rr397404 1183 bp downstream
Rr55859 within coordinates of
Tm9sf4 within coordinates of
SNP C/T C C T C C T C C T C C T T C T C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs258220672
MGI SNP Detail
Chr2:153004551 Rr397404 1190 bp downstream
Rr55859 within coordinates of
Tm9sf4 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs27352732
MGI SNP Detail
Chr2:153004604 Rr397404 1243 bp downstream
Tm9sf4 within coordinates of
SNP A/G A A G A A G A G G A A G G A G A
rs247467714
MGI SNP Detail
Chr2:153004689 Rr397404 1328 bp downstream
Tm9sf4 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27352731
MGI SNP Detail
Chr2:153004725 Rr397404 1364 bp downstream
Tm9sf4 within coordinates of
SNP C/T C C T C C T C C T C C T T C T C
rs264114097
MGI SNP Detail
Chr2:153004751 Rr397404 1390 bp downstream
Tm9sf4 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs27352730
MGI SNP Detail
Chr2:153004808 Rr397404 1447 bp downstream
Tm9sf4 within coordinates of
SNP A/G G G A G G A G G A G G A A G A G
rs249409131
MGI SNP Detail
Chr2:153004961 Rr397404 1600 bp downstream
Tm9sf4 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs215466937
MGI SNP Detail
Chr2:153005024 Rr397404 1663 bp downstream
Tm9sf4 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs232308635
MGI SNP Detail
Chr2:153005057 Rr397404 1696 bp downstream
Tm9sf4 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs27352729
MGI SNP Detail
Chr2:153005064 Rr397404 1703 bp downstream
Tm9sf4 within coordinates of
SNP A/T A A T A A T A A T A A T T A T A
rs49510794
MGI SNP Detail
Chr2:153005155 Rr397404 1794 bp downstream
Tm9sf4 within coordinates of
SNP A A
rs29675726
MGI SNP Detail
Chr2:153005207 Rr397404 1846 bp downstream
Tm9sf4 within coordinates of
SNP A/G A A G A
rs29562096
MGI SNP Detail
Chr2:153005212 Rr397404 1851 bp downstream
Tm9sf4 within coordinates of
SNP A/G A A G A
rs221249957
MGI SNP Detail
Chr2:153005213 Rr397404 1852 bp downstream
Tm9sf4 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs27352728
MGI SNP Detail
Chr2:153005320 Rr397404 1959 bp downstream
Tm9sf4 within coordinates of
SNP G/T G G T G G T G G G T G G T T G T G
rs257770190
MGI SNP Detail
Chr2:153005347 Rr397404 1986 bp downstream
Tm9sf4 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
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Showing SNP(s) 1 - 66 of 66

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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory