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Mouse SNP Summary
Symbol
Name
ID 		Rr398684
regulatory region 398684
MGI:7694796

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Showing SNP(s) 1 - 84 of 84

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CZECHII/EiJ
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LG/J
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
RIIIS/J
SEA/GnJ
SM/J
SPRET/EiJ
WSB/EiJ
ZALENDE/EiJ
rs46505633
MGI SNP Detail		 Chr4:145282890 Rr377362 within coordinates of
Rr398684 1629 bp upstream
 SNP A/G A G G
rs48472345
MGI SNP Detail		 Chr4:145282988 Rr377362 within coordinates of
Rr398684 1531 bp upstream
 SNP A/G A G G
rs49215939
MGI SNP Detail		 Chr4:145283049 Rr377362 within coordinates of
Rr398684 1470 bp upstream
 SNP C/G G C G G
rs52070367
MGI SNP Detail		 Chr4:145283067 Rr377362 within coordinates of
Rr398684 1452 bp upstream
 SNP C C
rs48694574
MGI SNP Detail		 Chr4:145283109 Rr377362 within coordinates of
Rr398684 1410 bp upstream
 SNP C C C C
rs582837067
MGI SNP Detail		 Chr4:145283211 Rr377362 within coordinates of
Rr398684 1308 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C G C
rs27611575
MGI SNP Detail		 Chr4:145283427 Rr377362 within coordinates of
Rr398684 1092 bp upstream
 SNP A/C C C C C C C C C C C A
rs50428857
MGI SNP Detail		 Chr4:145283520 Rr377362 within coordinates of
Rr398684 999 bp upstream
 SNP A A
rs50007545
MGI SNP Detail		 Chr4:145283637 Rr377362 within coordinates of
Rr398684 882 bp upstream
 SNP C C
rs27611574
MGI SNP Detail		 Chr4:145283651 Rr377362 within coordinates of
Rr398684 868 bp upstream
 SNP C/T C C C C C C C T C C C C C C C
rs48618466
MGI SNP Detail		 Chr4:145283659 Rr377362 within coordinates of
Rr398684 860 bp upstream
 SNP T T
rs27611573
MGI SNP Detail		 Chr4:145283723 Rr377362 within coordinates of
Rr398684 796 bp upstream
 SNP C/G G G G G G C
rs49141529
MGI SNP Detail		 Chr4:145283791 Rr377362 within coordinates of
Rr398684 728 bp upstream
 SNP T T T
rs48010038
MGI SNP Detail		 Chr4:145283845 Rr377362 within coordinates of
Rr398684 674 bp upstream
 SNP G G G
rs584878780
MGI SNP Detail		 Chr4:145283906 Rr377362 within coordinates of
Rr398684 613 bp upstream
 SNP G G G G G G G G G G G G G G G G
rs579109613
MGI SNP Detail		 Chr4:145283915 Rr377362 within coordinates of
Rr398684 604 bp upstream
 SNP C C C C C C C C C C C C C C C C C
rs582230069
MGI SNP Detail		 Chr4:145283917 Rr377362 within coordinates of
Rr398684 602 bp upstream
 SNP A A A A A A A A A A A A A A A
rs48823338
MGI SNP Detail		 Chr4:145283950 Rr377362 within coordinates of
Rr398684 569 bp upstream
 SNP G G
rs585996177
MGI SNP Detail		 Chr4:145283951 Rr377362 within coordinates of
Rr398684 568 bp upstream
 SNP T T T T T T T T T T T T T T T
rs579885710
MGI SNP Detail		 Chr4:145283960 Rr377362 within coordinates of
Rr398684 559 bp upstream
 SNP A A A A A A A A A A A A A A A A A
rs581688277
MGI SNP Detail		 Chr4:145283967 Rr377362 within coordinates of
Rr398684 552 bp upstream
 SNP G G G G G G G G G G G G G G G
rs585509065
MGI SNP Detail		 Chr4:145283974 Rr377362 within coordinates of
Rr398684 545 bp upstream
 SNP A A A A A A A A A A A A A A A
rs580313513
MGI SNP Detail		 Chr4:145283991 Rr377362 within coordinates of
Rr398684 528 bp upstream
 SNP A A A A A A A A A A A A A A A
rs51662071
MGI SNP Detail		 Chr4:145284004 Rr377362 within coordinates of
Rr398684 515 bp upstream
 SNP G G G
rs46896832
MGI SNP Detail		 Chr4:145284077 Rr398684 442 bp upstream
 SNP C/T T C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CZECHII/EiJ
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LG/J
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
RIIIS/J
SEA/GnJ
SM/J
SPRET/EiJ
WSB/EiJ
ZALENDE/EiJ
rs50486267
MGI SNP Detail		 Chr4:145284099 Rr398684 420 bp upstream
 SNP C C C
rs27611572
MGI SNP Detail		 Chr4:145284112 Rr398684 407 bp upstream
 SNP C/T T T T T T T T C T T T T T T
rs108604397
MGI SNP Detail		 Chr4:145284113 Rr398684 406 bp upstream
 SNP G G G
rs27611571
MGI SNP Detail		 Chr4:145284130 Rr398684 389 bp upstream
 SNP C/T T T T T T T T C T T T T T T
rs107910744
MGI SNP Detail		 Chr4:145284147 Rr398684 372 bp upstream
 SNP T T
rs48298017
MGI SNP Detail		 Chr4:145284191 Rr398684 328 bp upstream
 SNP G G G
rs47115652
MGI SNP Detail		 Chr4:145284209 Rr398684 310 bp upstream
 SNP A A
rs107961003
MGI SNP Detail		 Chr4:145284595 Rr398684 within coordinates of
 SNP T T T T
rs108520971
MGI SNP Detail		 Chr4:145284596 Rr398684 within coordinates of
 SNP C C C C
rs108112837
MGI SNP Detail		 Chr4:145284609 Rr398684 within coordinates of
 SNP G G G G
rs107818542
MGI SNP Detail		 Chr4:145284630 Rr398684 within coordinates of
 SNP T T
rs108426655
MGI SNP Detail		 Chr4:145284676 Rr398684 within coordinates of
 SNP G G G G
rs48406813
MGI SNP Detail		 Chr4:145284723 Rr398684 within coordinates of
 SNP G G G G G
rs108110554
MGI SNP Detail		 Chr4:145284739 Rr398684 within coordinates of
 SNP A A A
rs108785715
MGI SNP Detail		 Chr4:145284754 Rr398684 within coordinates of
 SNP A A
rs107659258
MGI SNP Detail		 Chr4:145284889 Rr398684 69 bp downstream
 SNP G G G
rs107839011
MGI SNP Detail		 Chr4:145284914 Rr398684 94 bp downstream
 SNP A A
rs108332562
MGI SNP Detail		 Chr4:145284967 Rr398684 147 bp downstream
 SNP A A
rs108247483
MGI SNP Detail		 Chr4:145284971 Rr398684 151 bp downstream
 SNP A A A
rs107711951
MGI SNP Detail		 Chr4:145284982 Rr398684 162 bp downstream
 SNP A A A
rs584052355
MGI SNP Detail		 Chr4:145284985 Rr398684 165 bp downstream
 SNP A A A A A
rs108317853
MGI SNP Detail		 Chr4:145285009 Rr398684 189 bp downstream
 SNP G G G
rs50055649
MGI SNP Detail		 Chr4:145285031 Rr398684 211 bp downstream
 SNP C C
rs107720314
MGI SNP Detail		 Chr4:145285097 Rr398684 277 bp downstream
 SNP T T T
rs107751585
MGI SNP Detail		 Chr4:145285146 Rr398684 326 bp downstream
 SNP G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CZECHII/EiJ
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LG/J
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
RIIIS/J
SEA/GnJ
SM/J
SPRET/EiJ
WSB/EiJ
ZALENDE/EiJ
rs108833663
MGI SNP Detail		 Chr4:145285147 Rr398684 327 bp downstream
 SNP C C C
rs107765524
MGI SNP Detail		 Chr4:145285230 Rr398684 410 bp downstream
 SNP T T
rs108028230
MGI SNP Detail		 Chr4:145285243 Rr398684 423 bp downstream
 SNP C C C
rs47403467
MGI SNP Detail		 Chr4:145285466 Rr398684 646 bp downstream
 SNP T T T
rs45732206
MGI SNP Detail		 Chr4:145285518 Rr398684 698 bp downstream
 SNP T T T
rs51465019
MGI SNP Detail		 Chr4:145285519 Rr398684 699 bp downstream
 SNP A/T A T T
rs52167367
MGI SNP Detail		 Chr4:145285596 Rr398684 776 bp downstream
 SNP G G
rs52338280
MGI SNP Detail		 Chr4:145285637 Rr398684 817 bp downstream
 SNP C/T C T C
rs48509132
MGI SNP Detail		 Chr4:145285704 Rr398684 884 bp downstream
 SNP A A A
rs47644093
MGI SNP Detail		 Chr4:145285709 Rr398684 889 bp downstream
 SNP A A A
rs48172183
MGI SNP Detail		 Chr4:145285711 Rr398684 891 bp downstream
 SNP T T T
rs47042830
MGI SNP Detail		 Chr4:145285774 Rr398684 954 bp downstream
 SNP G G G
rs50745820
MGI SNP Detail		 Chr4:145285789 Rr398684 969 bp downstream
 SNP T T
rs50677539
MGI SNP Detail		 Chr4:145285791 Rr398684 971 bp downstream
 SNP G G G
rs586822994
MGI SNP Detail		 Chr4:145285808 Rr398684 988 bp downstream
 SNP C C C C C C C C C C C C
rs108635755
MGI SNP Detail		 Chr4:145285818 Rr398684 998 bp downstream
 SNP G G G
rs51269646
MGI SNP Detail		 Chr4:145285851 Rr398684 1031 bp downstream
 SNP A A A
rs27611570
MGI SNP Detail		 Chr4:145285877 Rr398684 1057 bp downstream
 SNP G/T T T T T T T T T T T T T T G
rs49593353
MGI SNP Detail		 Chr4:145285956 Rr398684 1136 bp downstream
 SNP T T
rs49240545
MGI SNP Detail		 Chr4:145285980 Rr398684 1160 bp downstream
 SNP T T T
rs50500104
MGI SNP Detail		 Chr4:145286012 Rr398684 1192 bp downstream
 SNP T T T
rs51997102
MGI SNP Detail		 Chr4:145286019 Rr398684 1199 bp downstream
 SNP C C C
rs108358725
MGI SNP Detail		 Chr4:145286024 Rr398684 1204 bp downstream
 SNP A A
rs50443174
MGI SNP Detail		 Chr4:145286065 Rr398684 1245 bp downstream
 SNP C C C
rs51374767
MGI SNP Detail		 Chr4:145286075 Rr398684 1255 bp downstream
 SNP T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CZECHII/EiJ
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LG/J
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
RIIIS/J
SEA/GnJ
SM/J
SPRET/EiJ
WSB/EiJ
ZALENDE/EiJ
rs50321184
MGI SNP Detail		 Chr4:145286082 Rr398684 1262 bp downstream
 SNP G G G
rs49778758
MGI SNP Detail		 Chr4:145286256 Rr398684 1436 bp downstream
 SNP T T T
rs50183324
MGI SNP Detail		 Chr4:145286276 Rr398684 1456 bp downstream
 SNP C C C
rs47241023
MGI SNP Detail		 Chr4:145286352 Rr398684 1532 bp downstream
 SNP C C C
rs586716916
MGI SNP Detail		 Chr4:145286371 Rr398684 1551 bp downstream
 SNP A A A A A
rs50606494
MGI SNP Detail		 Chr4:145286373 Rr398684 1553 bp downstream
 SNP A A A A
rs386958130
MGI SNP Detail		 Chr4:145286638 Rr398684 1818 bp downstream
 SNP A/G G A
rs30624822
MGI SNP Detail		 Chr4:145286730 Rr398684 1910 bp downstream
 SNP A/C A A C
rs27592667
MGI SNP Detail		 Chr4:145286782 Rr398684 1962 bp downstream
 SNP C/T T ? C C C C C C C C C C C T
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Showing SNP(s) 1 - 84 of 84
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory