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Mouse SNP Summary
Symbol
Name
ID 		Rr399607
regulatory region 399607
MGI:7695719

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Showing SNP(s) 1 - 58 of 58

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs247320385
MGI SNP Detail		 Chr6:33035287 Chchd3 within coordinates of
Rr146107 within coordinates of
Rr399607 1882 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs215032903
MGI SNP Detail		 Chr6:33035331 Chchd3 within coordinates of
Rr146107 within coordinates of
Rr399607 1838 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G A G G G G
rs45905629
MGI SNP Detail		 Chr6:33035377 Chchd3 within coordinates of
Rr146107 within coordinates of
Rr399607 1792 bp upstream
 SNP A/T A A A A A A T A A A T A A T A
rs243777837
MGI SNP Detail		 Chr6:33035419 Chchd3 within coordinates of
Rr146107 within coordinates of
Rr399607 1750 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T C T T T T
rs51749847
MGI SNP Detail		 Chr6:33035512 Chchd3 within coordinates of
Rr146107 within coordinates of
Rr399607 1657 bp upstream
 SNP C/T T T T T T T C T T T C T T C T
rs234784173
MGI SNP Detail		 Chr6:33035538 Chchd3 within coordinates of
Rr146107 within coordinates of
Rr399607 1631 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs46976652
MGI SNP Detail		 Chr6:33035544 Chchd3 within coordinates of
Rr146107 within coordinates of
Rr399607 1625 bp upstream
 SNP A/T T T T T T T A T T T A T T A T
rs226016295
MGI SNP Detail		 Chr6:33035604 Chchd3 within coordinates of
Rr146107 within coordinates of
Rr399607 1565 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs583402159
MGI SNP Detail		 Chr6:33035683 Chchd3 within coordinates of
Rr146107 within coordinates of
Rr399607 1486 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236518742
MGI SNP Detail		 Chr6:33035770 Chchd3 within coordinates of
Rr146107 within coordinates of
Rr399607 1399 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G T G G T G G G G G G G G G T G G G G G G T G G G G G G T G G G
rs253139868
MGI SNP Detail		 Chr6:33035773 Chchd3 within coordinates of
Rr146107 within coordinates of
Rr399607 1396 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T A T T A T T T T T T T T T T A T T T T T T A T T T T T T T T T T T
rs222105642
MGI SNP Detail		 Chr6:33035781 Chchd3 within coordinates of
Rr146107 within coordinates of
Rr399607 1388 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T
rs52218405
MGI SNP Detail		 Chr6:33035809 Chchd3 within coordinates of
Rr146107 within coordinates of
Rr399607 1360 bp upstream
 SNP A/G A A A A A A G A A A G A A G A
rs50469418
MGI SNP Detail		 Chr6:33035905 Chchd3 within coordinates of
Rr146107 within coordinates of
Rr399607 1264 bp upstream
 SNP C/T T T T T T T C T T T C T T C T
rs246041392
MGI SNP Detail		 Chr6:33035934 Chchd3 within coordinates of
Rr146107 within coordinates of
Rr399607 1235 bp upstream
 SNP C/T T C
rs47305926
MGI SNP Detail		 Chr6:33036018 Chchd3 within coordinates of
Rr146107 within coordinates of
Rr399607 1151 bp upstream
 SNP A/G G G G G G G G A G A A
rs240855803
MGI SNP Detail		 Chr6:33036058 Chchd3 within coordinates of
Rr146107 within coordinates of
Rr399607 1111 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs264765500
MGI SNP Detail		 Chr6:33036123 Chchd3 within coordinates of
Rr146107 within coordinates of
Rr399607 1046 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs232920961
MGI SNP Detail		 Chr6:33036177 Chchd3 within coordinates of
Rr146107 within coordinates of
Rr399607 992 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs49611146
MGI SNP Detail		 Chr6:33036295 Chchd3 within coordinates of
Rr146107 within coordinates of
Rr399607 874 bp upstream
 SNP C/T C C C C C C T C C C T C C T C
rs49597483
MGI SNP Detail		 Chr6:33036330 Chchd3 within coordinates of
Rr146107 within coordinates of
Rr399607 839 bp upstream
 SNP C/T C C C C C C C C C C C C C C T
rs48380546
MGI SNP Detail		 Chr6:33036401 Chchd3 within coordinates of
Rr146107 within coordinates of
Rr399607 768 bp upstream
 SNP A/T T T T T T T A T T T A T T A T
rs46210055
MGI SNP Detail		 Chr6:33036445 Chchd3 within coordinates of
Rr146107 within coordinates of
Rr399607 724 bp upstream
 SNP A/C A A A A A A C A A A C A A C A
rs234111015
MGI SNP Detail		 Chr6:33036468 Chchd3 within coordinates of
Rr146107 within coordinates of
Rr399607 701 bp upstream
 SNP A/G G A
rs49037312
MGI SNP Detail		 Chr6:33036530 Chchd3 within coordinates of
Rr146107 within coordinates of
Rr399607 639 bp upstream
 SNP G/T G G G G G G G G G G T G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29960442
MGI SNP Detail		 Chr6:33036587 Chchd3 within coordinates of
Rr146107 within coordinates of
Rr399607 582 bp upstream
 SNP A/G G G G G G G G A G G A G G G G G G G G
rs50652932
MGI SNP Detail		 Chr6:33036627 Chchd3 within coordinates of
Rr146107 within coordinates of
Rr399607 542 bp upstream
 SNP A/G G G G G G G A G G G G G G G G
rs249969720
MGI SNP Detail		 Chr6:33036719 Chchd3 within coordinates of
Cpgi17277 within coordinates of
Rr146107 within coordinates of
Rr399607 450 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs218149037
MGI SNP Detail		 Chr6:33036840 Chchd3 within coordinates of
Cpgi17277 within coordinates of
Rr146107 within coordinates of
Rr399607 329 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236582706
MGI SNP Detail		 Chr6:33036883 Chchd3 within coordinates of
Cpgi17277 within coordinates of
Rr146107 within coordinates of
Rr399607 286 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs253055802
MGI SNP Detail		 Chr6:33036926 Chchd3 within coordinates of
Cpgi17277 within coordinates of
Rr146107 within coordinates of
Rr399607 243 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs213236903
MGI SNP Detail		 Chr6:33037117 Chchd3 within coordinates of
Cpgi17277 within coordinates of
Rr146107 within coordinates of
Rr399607 52 bp upstream
Tssr60218 within coordinates of
 SNP A/G A G
rs232172208
MGI SNP Detail		 Chr6:33037314 Rr146107 within coordinates of
Rr399607 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T C T T T C
rs262603565
MGI SNP Detail		 Chr6:33037380 Rr146107 within coordinates of
Rr399607 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs220922724
MGI SNP Detail		 Chr6:33037441 Rr146107 within coordinates of
Rr399607 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs49909038
MGI SNP Detail		 Chr6:33037481 Rr146107 within coordinates of
Rr399607 11 bp downstream
 SNP A/G G G G G G G A G G G G G G G G
rs255966434
MGI SNP Detail		 Chr6:33037585 Rr146107 within coordinates of
Rr399607 115 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A G
rs221736533
MGI SNP Detail		 Chr6:33037763 Rr399607 293 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241231510
MGI SNP Detail		 Chr6:33037810 Rr399607 340 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs257011923
MGI SNP Detail		 Chr6:33037812 Rr399607 342 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs45898481
MGI SNP Detail		 Chr6:33037878 Rr399607 408 bp downstream
 SNP C/G C C C C C C G C C C C G C C G G G
rs586827370
MGI SNP Detail		 Chr6:33037879 Rr399607 409 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G A G G G A
rs237478477
MGI SNP Detail		 Chr6:33037891 Rr399607 421 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G A G G G A
rs265239267
MGI SNP Detail		 Chr6:33037914 Rr399607 444 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A C A A A C
rs579496138
MGI SNP Detail		 Chr6:33038038 Rr399607 568 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G
rs227614264
MGI SNP Detail		 Chr6:33038124 Rr399607 654 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T C
rs254107264
MGI SNP Detail		 Chr6:33038169 Rr399607 699 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs46675302
MGI SNP Detail		 Chr6:33038493 Rr399607 1023 bp downstream
 SNP A/G G G G G G G A G G G G G G A G
rs229326631
MGI SNP Detail		 Chr6:33038682 Rr399607 1212 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs583989787
MGI SNP Detail		 Chr6:33038719 Rr399607 1249 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs586973786
MGI SNP Detail		 Chr6:33038741 Rr399607 1271 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A G A A A G
rs48760518
MGI SNP Detail		 Chr6:33038785 Rr399607 1315 bp downstream
 SNP A/C C C C C C C C C C C C C C C C A A
rs216124351
MGI SNP Detail		 Chr6:33038876 Rr399607 1406 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs231909841
MGI SNP Detail		 Chr6:33038997 Rr399607 1527 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C
rs258138389
MGI SNP Detail		 Chr6:33039007 Rr399607 1537 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C
rs47378875
MGI SNP Detail		 Chr6:33039210 Rr399607 1740 bp downstream
 SNP A/G G G G G G G G G G G A G G G G
rs212551816
MGI SNP Detail		 Chr6:33039229 Rr399607 1759 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A G A A A G
rs235817941
MGI SNP Detail		 Chr6:33039353 Rr399607 1883 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 58 of 58
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory