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Mouse SNP Summary
Symbol
Name
ID
Rr400195
regulatory region 400195
MGI:7696307

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Showing SNP(s) 1 - 65 of 65

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs226669749
MGI SNP Detail
Chr7:27171895 Rr400195 1969 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs46598509
MGI SNP Detail
Chr7:27171935 Rr400195 1929 bp upstream
SNP C/T C C C C C C T C C C C C C C
rs244365912
MGI SNP Detail
Chr7:27172032 Rr400195 1832 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs262927173
MGI SNP Detail
Chr7:27172061 Rr400195 1803 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230522997
MGI SNP Detail
Chr7:27172270 Rr400195 1594 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250284698
MGI SNP Detail
Chr7:27172326 Rr400195 1538 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs31797380
MGI SNP Detail
Chr7:27172437 Rr400195 1427 bp upstream
SNP C/T T C C C
rs240395370
MGI SNP Detail
Chr7:27172449 Rr400195 1415 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs248052062
MGI SNP Detail
Chr7:27172568 Rr400195 1296 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs215978218
MGI SNP Detail
Chr7:27172582 Rr400195 1282 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs234205101
MGI SNP Detail
Chr7:27172675 Cpgi18662 within coordinates of
Rr368273 within coordinates of
Rr400195 1189 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs252197667
MGI SNP Detail
Chr7:27172903 Cpgi18662 within coordinates of
Rr368273 within coordinates of
Rr400195 961 bp upstream
Rr644052 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs50920437
MGI SNP Detail
Chr7:27172917 Cpgi18662 within coordinates of
Rr368273 within coordinates of
Rr400195 947 bp upstream
Rr644052 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T T T T T T G T T T T T T G T T T T
rs237061403
MGI SNP Detail
Alliance Variant
Chr7:27173207 Cpgi18662 within coordinates of
Rr400195 657 bp upstream
Rr644053 within coordinates of
Sertad3 mRNA-UTR
Tssr65281 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs255485978
MGI SNP Detail
Alliance Variant
Chr7:27173235 Cpgi18662 within coordinates of
Rr400195 629 bp upstream
Rr644053 within coordinates of
Sertad3 mRNA-UTR
Tssr65281 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs48848322
MGI SNP Detail
Alliance Variant
Chr7:27173252 Cpgi18662 within coordinates of
Rr400195 612 bp upstream
Rr644053 within coordinates of
Sertad3 mRNA-UTR
SNP C/G G G G C C C C G C C C C C C C G G C G C C G C C C C C C G C G C C C C G C G C C C C C C G C C C C
rs240806254
MGI SNP Detail
Alliance Variant
Chr7:27173317 Cpgi18662 within coordinates of
Rr400195 547 bp upstream
Rr644053 within coordinates of
Sertad3 Intron
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs582168513
MGI SNP Detail
Alliance Variant
Chr7:27173341 Cpgi18662 within coordinates of
Rr400195 523 bp upstream
Rr644053 within coordinates of
Sertad3 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs251705183
MGI SNP Detail
Alliance Variant
Chr7:27173344 Cpgi18662 within coordinates of
Rr400195 520 bp upstream
Rr644053 within coordinates of
Sertad3 Intron
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs220440328
MGI SNP Detail
Alliance Variant
Chr7:27173359 Cpgi18662 within coordinates of
Rr400195 505 bp upstream
Rr644053 within coordinates of
Sertad3 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs238196302
MGI SNP Detail
Alliance Variant
Chr7:27173364 Cpgi18662 within coordinates of
Rr400195 500 bp upstream
Rr644053 within coordinates of
Sertad3 Intron
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs265003217
MGI SNP Detail
Alliance Variant
Chr7:27173460 Cpgi18662 within coordinates of
Rr400195 404 bp upstream
Rr644053 within coordinates of
Sertad3 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230372556
MGI SNP Detail
Alliance Variant
Chr7:27173558 Cpgi18662 within coordinates of
Rr400195 306 bp upstream
Rr644053 within coordinates of
Sertad3 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32363769
MGI SNP Detail
Alliance Variant
Chr7:27173611 Cpgi18662 within coordinates of
Rr400195 253 bp upstream
Rr644053 within coordinates of
Sertad3 Intron
SNP A/G G G A A A G A A A A A A A A G A
rs32393257
MGI SNP Detail
Alliance Variant
Chr7:27173689 Cpgi18662 within coordinates of
Rr400195 175 bp upstream
Rr644053 within coordinates of
Sertad3 Intron
SNP A/C A A C C C A C C C C C C C C A C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs229596546
MGI SNP Detail
Alliance Variant
Chr7:27173709 Cpgi18662 within coordinates of
Rr400195 155 bp upstream
Rr644053 within coordinates of
Sertad3 Intron
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs31539233
MGI SNP Detail
Alliance Variant
Chr7:27173718 Cpgi18662 within coordinates of
Rr400195 146 bp upstream
Rr644053 within coordinates of
Sertad3 Intron
SNP C/G C C G G G C G C G G G C G C G
rs216012505
MGI SNP Detail
Alliance Variant
Chr7:27173949 Cpgi18662 within coordinates of
Rr400195 within coordinates of
Rr644053 within coordinates of
Sertad3 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227391078
MGI SNP Detail
Alliance Variant
Chr7:27174082 Cpgi18662 within coordinates of
Rr400195 within coordinates of
Rr644053 within coordinates of
Sertad3 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C T C C C C C C T C C C C C C C C C C C
rs245895216
MGI SNP Detail
Alliance Variant
Chr7:27174112 Cpgi18662 within coordinates of
Rr400195 within coordinates of
Rr644053 within coordinates of
Sertad3 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214370581
MGI SNP Detail
Alliance Variant
Chr7:27174142 Cpgi18662 within coordinates of
Rr400195 within coordinates of
Rr644053 within coordinates of
Sertad3 Intron
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs49550494
MGI SNP Detail
Alliance Variant
Chr7:27174182 Cpgi18662 within coordinates of
Rr400195 17 bp downstream
Rr644053 within coordinates of
Sertad3 Intron
SNP C/T C C C C C C T C C C C C C
rs48550089
MGI SNP Detail
Alliance Variant
Chr7:27174266 Rr400195 101 bp downstream
Rr644053 within coordinates of
Sertad3 Intron
SNP A/G G G G G G G A G G G G G G G G
rs235351946
MGI SNP Detail
Alliance Variant
Chr7:27174409 Rr400195 244 bp downstream
Rr644053 within coordinates of
Sertad3 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs46760275
MGI SNP Detail
Alliance Variant
Chr7:27174421 Rr400195 256 bp downstream
Rr644053 within coordinates of
Sertad3 Intron
SNP A/G G G G G G G G G G G G G G A G
rs218998589
MGI SNP Detail
Alliance Variant
Chr7:27174428 Rr400195 263 bp downstream
Rr644053 within coordinates of
Sertad3 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234315964
MGI SNP Detail
Alliance Variant
Chr7:27174496 Rr400195 331 bp downstream
Rr644053 within coordinates of
Sertad3 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251910931
MGI SNP Detail
Alliance Variant
Chr7:27174527 Rr400195 362 bp downstream
Rr644053 within coordinates of
Sertad3 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220473665
MGI SNP Detail
Alliance Variant
Chr7:27174563 Rr400195 398 bp downstream
Rr644053 within coordinates of
Sertad3 Intron
SNP A/T T T T A A A A A T A A A A A A A T T A T A A T A A A A T A A T A T A A A A T A T A A A A A A A T T A A A
rs238031280
MGI SNP Detail
Alliance Variant
Chr7:27174609 Rr400195 444 bp downstream
Rr644053 within coordinates of
Sertad3 Intron
SNP C/T C C C T T T T C T T T T T T T C C T C T T C T T T T C T T T C T C T T T T C T C T T T T T T T T C T T T
rs256868600
MGI SNP Detail
Alliance Variant
Chr7:27174634 Rr400195 469 bp downstream
Rr644053 within coordinates of
Sertad3 Intron
SNP A/T A A A T T T T A T T T T T T T A A T A T T A T T T T A T T T A T A T T T T A T A T T T T T T T T A T T T
rs220749363
MGI SNP Detail
Alliance Variant
Chr7:27174667 Rr400195 502 bp downstream
Rr644053 within coordinates of
Sertad3 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs47316945
MGI SNP Detail
Alliance Variant
Chr7:27174676 Rr400195 511 bp downstream
Rr644053 within coordinates of
Sertad3 Intron
SNP A/C C A A A C A C A A A C A C C A
rs48807475
MGI SNP Detail
Alliance Variant
Chr7:27174720 Rr400195 555 bp downstream
Rr644053 within coordinates of
Sertad3 Intron
SNP A/G G A A A G A G A A A G A G G A
rs229454287
MGI SNP Detail
Alliance Variant
Chr7:27174794 Rr400195 629 bp downstream
Rr644053 within coordinates of
Sertad3 Intron
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs48418454
MGI SNP Detail
Alliance Variant
Chr7:27174818 Rr400195 653 bp downstream
Rr644053 within coordinates of
Sertad3 Intron
SNP A/G G A A A G A G A A A G A G G A
rs260254043
MGI SNP Detail
Alliance Variant
Chr7:27174825 Rr400195 660 bp downstream
Rr644053 within coordinates of
Sertad3 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs585727508
MGI SNP Detail
Alliance Variant
Chr7:27174932 Rr400195 767 bp downstream
Sertad3 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31648562
MGI SNP Detail
Alliance Variant
Chr7:27175146 Rr400195 981 bp downstream
Sertad3 Intron
SNP A/G G G A G G G
rs249244814
MGI SNP Detail
Alliance Variant
Chr7:27175225 Rr400195 1060 bp downstream
Sertad3 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs50772688
MGI SNP Detail
Alliance Variant
Chr7:27175272 Rr400195 1107 bp downstream
Sertad3 Intron
SNP A/C C A A A C A C A A A C A C C A
rs234142568
MGI SNP Detail
Alliance Variant
Chr7:27175293 Rr400195 1128 bp downstream
Sertad3 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs245977362
MGI SNP Detail
Alliance Variant
Chr7:27175349 Rr400195 1184 bp downstream
Sertad3 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215119167
MGI SNP Detail
Alliance Variant
Chr7:27175425 Rr400195 1260 bp downstream
Sertad3 Intron
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs579135550
MGI SNP Detail
Alliance Variant
Chr7:27175446 Rr400195 1281 bp downstream
Sertad3 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs32083432
MGI SNP Detail
Alliance Variant
Chr7:27175463 Rr400195 1298 bp downstream
Sertad3 Intron
SNP C/T C T T
rs582345208
MGI SNP Detail
Alliance Variant
Chr7:27175489 Rr400195 1324 bp downstream
Sertad3 Intron
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs31548705
MGI SNP Detail
Alliance Variant
Chr7:27175608 Rr400195 1443 bp downstream
Sertad3 Coding-NonSynonymous
SNP A/G G A A
rs261851649
MGI SNP Detail
Alliance Variant
Chr7:27175675 Rr400195 1510 bp downstream
Sertad3 Coding-Synonymous
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs221051243
MGI SNP Detail
Alliance Variant
Chr7:27175698 Rr400195 1533 bp downstream
Sertad3 Coding-NonSynonymous
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236011921
MGI SNP Detail
Alliance Variant
Chr7:27175741 Rr400195 1576 bp downstream
Sertad3 Coding-Synonymous
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs32001974
MGI SNP Detail
Alliance Variant
Chr7:27175810 Rr400195 1645 bp downstream
Sertad3 Coding-Synonymous
SNP A/G G G A A A G A A G A A A G A G G A
rs223721247
MGI SNP Detail
Alliance Variant
Chr7:27175843 Rr400195 1678 bp downstream
Sertad3 Coding-Synonymous
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs242236261
MGI SNP Detail
Alliance Variant
Chr7:27175904 Rr400195 1739 bp downstream
Sertad3 Coding-NonSynonymous
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs47289608
MGI SNP Detail
Alliance Variant
Chr7:27175936 Rr400195 1771 bp downstream
Sertad3 Coding-Synonymous
SNP A/G G G G G G G G G G G A G G A G
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Showing SNP(s) 1 - 65 of 65

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory