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Mouse SNP Summary
Symbol
Name
ID
Rr401678
regulatory region 401678
MGI:7697790

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Showing SNP(s) 1 - 64 of 64

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs233064908
MGI SNP Detail
Chr9:108139160 Dag1 within coordinates of
Rr401678 1948 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C T C T C C C C T C C C C C C C C C C C C T C C C C C C C T C C C C
rs259271318
MGI SNP Detail
Chr9:108139271 Dag1 within coordinates of
Rr401678 1837 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs219235490
MGI SNP Detail
Chr9:108139314 Dag1 within coordinates of
Rr401678 1794 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs223644311
MGI SNP Detail
Chr9:108139409 Dag1 within coordinates of
Rr401678 1699 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243231836
MGI SNP Detail
Chr9:108139415 Dag1 within coordinates of
Rr401678 1693 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs213945766
MGI SNP Detail
Chr9:108139421 Dag1 within coordinates of
Rr401678 1687 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs232357839
MGI SNP Detail
Chr9:108139570 Dag1 within coordinates of
Rr401678 1538 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258886893
MGI SNP Detail
Chr9:108139621 Dag1 within coordinates of
Rr401678 1487 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G
rs217609607
MGI SNP Detail
Chr9:108139783 Dag1 within coordinates of
Rr401678 1325 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T
rs239834644
MGI SNP Detail
Chr9:108140255 Dag1 within coordinates of
Rr401678 853 bp upstream
Rr686759 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G G A G A A A A G A G A A A G A A A A A A G A A A A A A A G A A G G
rs264036274
MGI SNP Detail
Chr9:108140344 Cpgi22331 within coordinates of
Dag1 within coordinates of
Rr401678 764 bp upstream
Rr686759 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T G G T G T T T T G T T T T G T T T T T T G T T T T T T T G T T G
rs217865783
MGI SNP Detail
Chr9:108140390 Cpgi22331 within coordinates of
Dag1 within coordinates of
Rr401678 718 bp upstream
Rr686759 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs581522173
MGI SNP Detail
Chr9:108140616 Cpgi22331 within coordinates of
Dag1 within coordinates of
Rr401678 492 bp upstream
Rr686759 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs237884278
MGI SNP Detail
Chr9:108140621 Cpgi22331 within coordinates of
Dag1 within coordinates of
Rr401678 487 bp upstream
Rr686759 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T C T C T T T T C T T T T T T T T T T T C T T T T T T T C T T T T
rs584925599
MGI SNP Detail
Chr9:108140625 Cpgi22331 within coordinates of
Dag1 within coordinates of
Rr401678 483 bp upstream
Rr686759 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs578379000
MGI SNP Detail
Chr9:108140855 Cpgi22331 within coordinates of
Dag1 within coordinates of
Rr401678 253 bp upstream
Rr686759 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C
rs251000073
MGI SNP Detail
Chr9:108141093 Cpgi22331 within coordinates of
Dag1 within coordinates of
Rr401678 15 bp upstream
Rr686761 within coordinates of
Tssr91512 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs220188997
MGI SNP Detail
Chr9:108141227 Cpgi22331 within coordinates of
Rr401678 within coordinates of
Rr686761 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240421295
MGI SNP Detail
Chr9:108141359 Cpgi22331 within coordinates of
Gm69433 within coordinates of
Rr401678 within coordinates of
Rr686762 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs263485592
MGI SNP Detail
Chr9:108141440 Cpgi22331 within coordinates of
Gm69433 within coordinates of
Rr401678 31 bp downstream
Rr686762 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234055093
MGI SNP Detail
Chr9:108141654 Gm69433 within coordinates of
Rr401678 245 bp downstream
Rr686762 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs248257882
MGI SNP Detail
Chr9:108141755 Gm69433 within coordinates of
Rr401678 346 bp downstream
Rr686762 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T C T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs266172348
MGI SNP Detail
Chr9:108141809 Gm69433 within coordinates of
Rr401678 400 bp downstream
Rr686762 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T A T A T T T T A T T T T T T T T T T T T A T T T T T T T T T T T T
rs223561330
MGI SNP Detail
Chr9:108141827 Gm69433 within coordinates of
Rr401678 418 bp downstream
Rr686762 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G G A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs243268247
MGI SNP Detail
Chr9:108141881 Gm69433 within coordinates of
Rr401678 472 bp downstream
Rr686762 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs255621559
MGI SNP Detail
Chr9:108141882 Gm69433 within coordinates of
Rr401678 473 bp downstream
Rr686762 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226222185
MGI SNP Detail
Chr9:108141996 Gm69433 within coordinates of
Rr401678 587 bp downstream
Rr686762 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs257613134
MGI SNP Detail
Chr9:108142026 Gm69433 within coordinates of
Rr401678 617 bp downstream
Rr686762 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs217029126
MGI SNP Detail
Chr9:108142047 Gm69433 within coordinates of
Rr401678 638 bp downstream
Rr686762 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C C T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs242604705
MGI SNP Detail
Chr9:108142076 Gm69433 within coordinates of
Rr401678 667 bp downstream
Rr686762 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs255066656
MGI SNP Detail
Chr9:108142130 Gm69433 within coordinates of
Rr401678 721 bp downstream
Rr686762 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs211777832
MGI SNP Detail
Chr9:108142181 Gm69433 within coordinates of
Rr401678 772 bp downstream
Rr686762 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs230285672
MGI SNP Detail
Chr9:108142187 Gm69433 within coordinates of
Rr401678 778 bp downstream
Rr686762 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G C C G C G G G G C G G G G G C G G G G G G C G G G G G G G C G G G G
rs250890526
MGI SNP Detail
Chr9:108142193 Gm69433 within coordinates of
Rr401678 784 bp downstream
Rr686762 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220078774
MGI SNP Detail
Chr9:108142242 Rr401678 833 bp downstream
Rr686762 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C
rs237611129
MGI SNP Detail
Chr9:108142250 Rr401678 841 bp downstream
Rr686762 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs263276121
MGI SNP Detail
Chr9:108142302 Rr401678 893 bp downstream
Rr686762 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225627183
MGI SNP Detail
Chr9:108142318 Rr401678 909 bp downstream
Rr686762 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs251322897
MGI SNP Detail
Chr9:108142369 Rr401678 960 bp downstream
Rr686762 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C A C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs261472203
MGI SNP Detail
Chr9:108142381 Rr401678 972 bp downstream
Rr686762 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs580854361
MGI SNP Detail
Chr9:108142426 Rr401678 1017 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs218051376
MGI SNP Detail
Chr9:108142432 Rr401678 1023 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs236785720
MGI SNP Detail
Chr9:108142462 Rr401678 1053 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs255433338
MGI SNP Detail
Chr9:108142500 Rr401678 1091 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A C C A C A A A A C A A A A A C A A A A A A C A A A A A A A A A A A A
rs584639912
MGI SNP Detail
Chr9:108142607 Rr401678 1198 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs578826493
MGI SNP Detail
Chr9:108142630 Rr401678 1221 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs226263563
MGI SNP Detail
Chr9:108142671 Rr401678 1262 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T T C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs29936813
MGI SNP Detail
Chr9:108142711 Rr401678 1302 bp downstream
SNP A/G A G G A
rs265796862
MGI SNP Detail
Chr9:108142756 Rr401678 1347 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs233358580
MGI SNP Detail
Chr9:108142771 Rr401678 1362 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T C C T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs260566990
MGI SNP Detail
Chr9:108142822 Rr401678 1413 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212464202
MGI SNP Detail
Chr9:108142823 Rr401678 1414 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs231079247
MGI SNP Detail
Chr9:108142835 Rr401678 1426 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs244708765
MGI SNP Detail
Chr9:108142887 Rr401678 1478 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214039837
MGI SNP Detail
Chr9:108142913 Rr401678 1504 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs239750620
MGI SNP Detail
Chr9:108143026 Rr401678 1617 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A T T A T A A A A T A A A A A T A A A A A A T A A A A A A A T A A A A
rs582290183
MGI SNP Detail
Chr9:108143042 Rr401678 1633 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs585892614
MGI SNP Detail
Chr9:108143047 Rr401678 1638 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs259180194
MGI SNP Detail
Chr9:108143110 Rr401678 1701 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs226084597
MGI SNP Detail
Chr9:108143138 Rr401678 1729 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs240162893
MGI SNP Detail
Chr9:108143165 Rr401678 1756 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs579031452
MGI SNP Detail
Chr9:108143229 Rr401678 1820 bp downstream
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs582682476
MGI SNP Detail
Chr9:108143306 Rr401678 1897 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs586069974
MGI SNP Detail
Chr9:108143318 Rr401678 1909 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 64 of 64

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory